Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3502 and Pf6N2E2_3503 are separated by 48 nucleotides Pf6N2E2_3503 and Pf6N2E2_3504 are separated by 235 nucleotides
Pf6N2E2_3502 - VgrG protein, at 4,082,205 to 4,083,251
_3502
Pf6N2E2_3503 - hypothetical protein, at 4,083,300 to 4,083,650
_3503
Pf6N2E2_3504 - Biosynthetic arginine decarboxylase (EC 4.1.1.19), at 4,083,886 to 4,085,799
_3504
Position (kb)
4083
4084 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4082.403 kb on + strand, within Pf6N2E2_3502 at 4082.403 kb on + strand, within Pf6N2E2_3502 at 4082.403 kb on + strand, within Pf6N2E2_3502 at 4082.404 kb on - strand, within Pf6N2E2_3502 at 4082.404 kb on - strand, within Pf6N2E2_3502 at 4082.463 kb on - strand, within Pf6N2E2_3502 at 4082.573 kb on - strand, within Pf6N2E2_3502 at 4082.573 kb on - strand, within Pf6N2E2_3502 at 4082.573 kb on - strand, within Pf6N2E2_3502 at 4082.735 kb on - strand, within Pf6N2E2_3502 at 4082.936 kb on - strand, within Pf6N2E2_3502 at 4082.973 kb on - strand, within Pf6N2E2_3502 at 4083.042 kb on + strand, within Pf6N2E2_3502 at 4083.346 kb on + strand, within Pf6N2E2_3503 at 4083.346 kb on + strand, within Pf6N2E2_3503 at 4083.400 kb on + strand, within Pf6N2E2_3503 at 4083.400 kb on + strand, within Pf6N2E2_3503 at 4083.400 kb on + strand, within Pf6N2E2_3503 at 4083.401 kb on - strand, within Pf6N2E2_3503 at 4083.401 kb on - strand, within Pf6N2E2_3503 at 4083.401 kb on - strand, within Pf6N2E2_3503 at 4083.401 kb on - strand, within Pf6N2E2_3503 at 4083.472 kb on - strand, within Pf6N2E2_3503 at 4083.524 kb on + strand, within Pf6N2E2_3503 at 4083.569 kb on + strand, within Pf6N2E2_3503 at 4083.570 kb on - strand, within Pf6N2E2_3503 at 4083.570 kb on - strand, within Pf6N2E2_3503 at 4083.582 kb on + strand, within Pf6N2E2_3503 at 4083.582 kb on + strand, within Pf6N2E2_3503 at 4083.583 kb on - strand, within Pf6N2E2_3503 at 4083.583 kb on - strand, within Pf6N2E2_3503 at 4083.583 kb on - strand, within Pf6N2E2_3503 at 4083.583 kb on - strand, within Pf6N2E2_3503 at 4083.589 kb on + strand, within Pf6N2E2_3503 at 4083.590 kb on - strand, within Pf6N2E2_3503 at 4083.590 kb on - strand, within Pf6N2E2_3503 at 4083.602 kb on - strand, within Pf6N2E2_3503 at 4083.610 kb on + strand, within Pf6N2E2_3503 at 4083.611 kb on - strand, within Pf6N2E2_3503 at 4083.611 kb on - strand, within Pf6N2E2_3503 at 4083.627 kb on - strand at 4083.627 kb on - strand at 4083.640 kb on + strand at 4083.640 kb on + strand at 4083.640 kb on + strand at 4083.641 kb on - strand at 4083.648 kb on + strand at 4083.648 kb on + strand at 4083.663 kb on + strand at 4083.710 kb on + strand at 4083.710 kb on + strand at 4083.711 kb on - strand at 4083.740 kb on + strand at 4083.820 kb on + strand at 4084.025 kb on + strand at 4084.025 kb on + strand at 4084.073 kb on + strand at 4084.073 kb on + strand at 4084.097 kb on + strand, within Pf6N2E2_3504 at 4084.097 kb on + strand, within Pf6N2E2_3504 at 4084.097 kb on + strand, within Pf6N2E2_3504 at 4084.097 kb on + strand, within Pf6N2E2_3504 at 4084.187 kb on + strand, within Pf6N2E2_3504 at 4084.187 kb on + strand, within Pf6N2E2_3504 at 4084.187 kb on + strand, within Pf6N2E2_3504 at 4084.188 kb on - strand, within Pf6N2E2_3504 at 4084.250 kb on + strand, within Pf6N2E2_3504 at 4084.250 kb on + strand, within Pf6N2E2_3504 at 4084.251 kb on - strand, within Pf6N2E2_3504 at 4084.406 kb on + strand, within Pf6N2E2_3504 at 4084.406 kb on + strand, within Pf6N2E2_3504 at 4084.406 kb on + strand, within Pf6N2E2_3504 at 4084.406 kb on + strand, within Pf6N2E2_3504 at 4084.406 kb on + strand, within Pf6N2E2_3504 at 4084.407 kb on - strand, within Pf6N2E2_3504 at 4084.407 kb on - strand, within Pf6N2E2_3504 at 4084.407 kb on - strand, within Pf6N2E2_3504 at 4084.407 kb on - strand, within Pf6N2E2_3504 at 4084.407 kb on - strand, within Pf6N2E2_3504 at 4084.441 kb on + strand, within Pf6N2E2_3504 at 4084.441 kb on + strand, within Pf6N2E2_3504 at 4084.505 kb on + strand, within Pf6N2E2_3504 at 4084.506 kb on - strand, within Pf6N2E2_3504 at 4084.506 kb on - strand, within Pf6N2E2_3504 at 4084.506 kb on - strand, within Pf6N2E2_3504 at 4084.557 kb on - strand, within Pf6N2E2_3504 at 4084.557 kb on - strand, within Pf6N2E2_3504 at 4084.580 kb on + strand, within Pf6N2E2_3504 at 4084.580 kb on + strand, within Pf6N2E2_3504 at 4084.580 kb on + strand, within Pf6N2E2_3504 at 4084.581 kb on - strand, within Pf6N2E2_3504 at 4084.581 kb on - strand, within Pf6N2E2_3504 at 4084.581 kb on - strand, within Pf6N2E2_3504 at 4084.581 kb on - strand, within Pf6N2E2_3504 at 4084.599 kb on - strand, within Pf6N2E2_3504
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 4,082,403 + Pf6N2E2_3502 0.19 -0.6 4,082,403 + Pf6N2E2_3502 0.19 -0.1 4,082,403 + Pf6N2E2_3502 0.19 +0.2 4,082,404 - Pf6N2E2_3502 0.19 +1.3 4,082,404 - Pf6N2E2_3502 0.19 +1.1 4,082,463 - Pf6N2E2_3502 0.25 +1.0 4,082,573 - Pf6N2E2_3502 0.35 +1.4 4,082,573 - Pf6N2E2_3502 0.35 -2.4 4,082,573 - Pf6N2E2_3502 0.35 +0.0 4,082,735 - Pf6N2E2_3502 0.51 -0.6 4,082,936 - Pf6N2E2_3502 0.70 +0.9 4,082,973 - Pf6N2E2_3502 0.73 -0.6 4,083,042 + Pf6N2E2_3502 0.80 +0.6 4,083,346 + Pf6N2E2_3503 0.13 -0.3 4,083,346 + Pf6N2E2_3503 0.13 +0.4 4,083,400 + Pf6N2E2_3503 0.28 -0.2 4,083,400 + Pf6N2E2_3503 0.28 +1.0 4,083,400 + Pf6N2E2_3503 0.28 +0.1 4,083,401 - Pf6N2E2_3503 0.29 +0.8 4,083,401 - Pf6N2E2_3503 0.29 +0.8 4,083,401 - Pf6N2E2_3503 0.29 -2.4 4,083,401 - Pf6N2E2_3503 0.29 -0.1 4,083,472 - Pf6N2E2_3503 0.49 +0.7 4,083,524 + Pf6N2E2_3503 0.64 -0.4 4,083,569 + Pf6N2E2_3503 0.77 +0.4 4,083,570 - Pf6N2E2_3503 0.77 +0.5 4,083,570 - Pf6N2E2_3503 0.77 +1.3 4,083,582 + Pf6N2E2_3503 0.80 +0.9 4,083,582 + Pf6N2E2_3503 0.80 -0.4 4,083,583 - Pf6N2E2_3503 0.81 +2.4 4,083,583 - Pf6N2E2_3503 0.81 -1.6 4,083,583 - Pf6N2E2_3503 0.81 +1.1 4,083,583 - Pf6N2E2_3503 0.81 -0.2 4,083,589 + Pf6N2E2_3503 0.82 +1.5 4,083,590 - Pf6N2E2_3503 0.83 +1.2 4,083,590 - Pf6N2E2_3503 0.83 +0.4 4,083,602 - Pf6N2E2_3503 0.86 +1.6 4,083,610 + Pf6N2E2_3503 0.88 -0.1 4,083,611 - Pf6N2E2_3503 0.89 +1.0 4,083,611 - Pf6N2E2_3503 0.89 -0.2 4,083,627 - -0.1 4,083,627 - -1.2 4,083,640 + -0.6 4,083,640 + +0.4 4,083,640 + -0.1 4,083,641 - -0.2 4,083,648 + -0.6 4,083,648 + -0.5 4,083,663 + +1.1 4,083,710 + -0.6 4,083,710 + +1.2 4,083,711 - +0.5 4,083,740 + -0.1 4,083,820 + +0.0 4,084,025 + +0.5 4,084,025 + -0.2 4,084,073 + +0.7 4,084,073 + +0.4 4,084,097 + Pf6N2E2_3504 0.11 +0.2 4,084,097 + Pf6N2E2_3504 0.11 +0.8 4,084,097 + Pf6N2E2_3504 0.11 +0.2 4,084,097 + Pf6N2E2_3504 0.11 +1.0 4,084,187 + Pf6N2E2_3504 0.16 +1.4 4,084,187 + Pf6N2E2_3504 0.16 +0.4 4,084,187 + Pf6N2E2_3504 0.16 +1.7 4,084,188 - Pf6N2E2_3504 0.16 -0.3 4,084,250 + Pf6N2E2_3504 0.19 -0.3 4,084,250 + Pf6N2E2_3504 0.19 +0.4 4,084,251 - Pf6N2E2_3504 0.19 +0.6 4,084,406 + Pf6N2E2_3504 0.27 +1.0 4,084,406 + Pf6N2E2_3504 0.27 -0.1 4,084,406 + Pf6N2E2_3504 0.27 +0.8 4,084,406 + Pf6N2E2_3504 0.27 +1.1 4,084,406 + Pf6N2E2_3504 0.27 +0.7 4,084,407 - Pf6N2E2_3504 0.27 +0.9 4,084,407 - Pf6N2E2_3504 0.27 +0.6 4,084,407 - Pf6N2E2_3504 0.27 +1.3 4,084,407 - Pf6N2E2_3504 0.27 +0.7 4,084,407 - Pf6N2E2_3504 0.27 +0.8 4,084,441 + Pf6N2E2_3504 0.29 +0.8 4,084,441 + Pf6N2E2_3504 0.29 -0.9 4,084,505 + Pf6N2E2_3504 0.32 +1.1 4,084,506 - Pf6N2E2_3504 0.32 +0.5 4,084,506 - Pf6N2E2_3504 0.32 +2.1 4,084,506 - Pf6N2E2_3504 0.32 +0.4 4,084,557 - Pf6N2E2_3504 0.35 +0.6 4,084,557 - Pf6N2E2_3504 0.35 -0.2 4,084,580 + Pf6N2E2_3504 0.36 -0.8 4,084,580 + Pf6N2E2_3504 0.36 +0.9 4,084,580 + Pf6N2E2_3504 0.36 +0.4 4,084,581 - Pf6N2E2_3504 0.36 -0.4 4,084,581 - Pf6N2E2_3504 0.36 +1.0 4,084,581 - Pf6N2E2_3504 0.36 +0.4 4,084,581 - Pf6N2E2_3504 0.36 +0.3 4,084,599 - Pf6N2E2_3504 0.37 +0.3
Or see this region's nucleotide sequence