Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3404 and Pf6N2E2_3405 overlap by 4 nucleotides Pf6N2E2_3405 and Pf6N2E2_3406 overlap by 1 nucleotides Pf6N2E2_3406 and Pf6N2E2_3407 are separated by 79 nucleotides
Pf6N2E2_3404 - Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps, at 3,949,017 to 3,949,700
_3404
Pf6N2E2_3405 - FIG00984945: hypothetical protein, at 3,949,697 to 3,950,353
_3405
Pf6N2E2_3406 - putative ABC transporter ATP-binding protein, at 3,950,353 to 3,951,141
_3406
Pf6N2E2_3407 - putative solute-binding component of ABC transporter, at 3,951,221 to 3,952,090
_3407
Position (kb)
3950
3951
3952 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3949.384 kb on + strand, within Pf6N2E2_3404 at 3949.384 kb on + strand, within Pf6N2E2_3404 at 3949.384 kb on + strand, within Pf6N2E2_3404 at 3949.385 kb on - strand, within Pf6N2E2_3404 at 3949.385 kb on - strand, within Pf6N2E2_3404 at 3949.669 kb on + strand at 3949.767 kb on + strand, within Pf6N2E2_3405 at 3949.767 kb on + strand, within Pf6N2E2_3405 at 3949.767 kb on + strand, within Pf6N2E2_3405 at 3949.767 kb on + strand, within Pf6N2E2_3405 at 3949.768 kb on - strand, within Pf6N2E2_3405 at 3949.768 kb on - strand, within Pf6N2E2_3405 at 3949.768 kb on - strand, within Pf6N2E2_3405 at 3949.768 kb on - strand, within Pf6N2E2_3405 at 3949.768 kb on - strand, within Pf6N2E2_3405 at 3949.788 kb on + strand, within Pf6N2E2_3405 at 3949.788 kb on + strand, within Pf6N2E2_3405 at 3949.788 kb on + strand, within Pf6N2E2_3405 at 3949.788 kb on + strand, within Pf6N2E2_3405 at 3949.788 kb on + strand, within Pf6N2E2_3405 at 3949.789 kb on - strand, within Pf6N2E2_3405 at 3949.789 kb on - strand, within Pf6N2E2_3405 at 3949.789 kb on - strand, within Pf6N2E2_3405 at 3949.899 kb on + strand, within Pf6N2E2_3405 at 3949.899 kb on + strand, within Pf6N2E2_3405 at 3949.899 kb on + strand, within Pf6N2E2_3405 at 3949.899 kb on + strand, within Pf6N2E2_3405 at 3949.899 kb on + strand, within Pf6N2E2_3405 at 3949.900 kb on - strand, within Pf6N2E2_3405 at 3949.900 kb on - strand, within Pf6N2E2_3405 at 3949.900 kb on - strand, within Pf6N2E2_3405 at 3949.900 kb on - strand, within Pf6N2E2_3405 at 3949.950 kb on + strand, within Pf6N2E2_3405 at 3949.950 kb on + strand, within Pf6N2E2_3405 at 3949.950 kb on + strand, within Pf6N2E2_3405 at 3949.951 kb on - strand, within Pf6N2E2_3405 at 3949.966 kb on + strand, within Pf6N2E2_3405 at 3949.966 kb on + strand, within Pf6N2E2_3405 at 3950.039 kb on - strand, within Pf6N2E2_3405 at 3950.131 kb on - strand, within Pf6N2E2_3405 at 3950.131 kb on - strand, within Pf6N2E2_3405 at 3950.201 kb on + strand, within Pf6N2E2_3405 at 3950.201 kb on + strand, within Pf6N2E2_3405 at 3950.229 kb on - strand, within Pf6N2E2_3405 at 3950.267 kb on + strand, within Pf6N2E2_3405 at 3950.267 kb on + strand, within Pf6N2E2_3405 at 3950.268 kb on - strand, within Pf6N2E2_3405 at 3950.268 kb on - strand, within Pf6N2E2_3405 at 3950.747 kb on + strand, within Pf6N2E2_3406 at 3950.748 kb on - strand, within Pf6N2E2_3406 at 3950.828 kb on + strand, within Pf6N2E2_3406 at 3950.829 kb on - strand, within Pf6N2E2_3406 at 3950.829 kb on - strand, within Pf6N2E2_3406 at 3950.972 kb on + strand, within Pf6N2E2_3406 at 3951.086 kb on + strand at 3951.087 kb on - strand at 3951.087 kb on - strand at 3951.087 kb on - strand at 3951.097 kb on + strand at 3951.098 kb on - strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.164 kb on + strand at 3951.165 kb on - strand at 3951.165 kb on - strand at 3951.165 kb on - strand at 3951.165 kb on - strand at 3951.165 kb on - strand at 3951.222 kb on + strand at 3951.222 kb on + strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.223 kb on - strand at 3951.516 kb on + strand, within Pf6N2E2_3407 at 3951.516 kb on + strand, within Pf6N2E2_3407 at 3951.597 kb on + strand, within Pf6N2E2_3407 at 3951.724 kb on + strand, within Pf6N2E2_3407 at 3951.724 kb on + strand, within Pf6N2E2_3407 at 3951.724 kb on + strand, within Pf6N2E2_3407 at 3951.725 kb on - strand, within Pf6N2E2_3407 at 3951.725 kb on - strand, within Pf6N2E2_3407 at 3951.725 kb on - strand, within Pf6N2E2_3407 at 3951.738 kb on + strand, within Pf6N2E2_3407 at 3951.739 kb on - strand, within Pf6N2E2_3407 at 3951.739 kb on - strand, within Pf6N2E2_3407 at 3951.745 kb on + strand, within Pf6N2E2_3407 at 3951.874 kb on + strand, within Pf6N2E2_3407 at 3951.874 kb on + strand, within Pf6N2E2_3407 at 3951.874 kb on + strand, within Pf6N2E2_3407 at 3951.874 kb on + strand, within Pf6N2E2_3407 at 3951.934 kb on + strand, within Pf6N2E2_3407 at 3951.934 kb on + strand, within Pf6N2E2_3407 at 3951.942 kb on + strand, within Pf6N2E2_3407 at 3951.958 kb on + strand, within Pf6N2E2_3407 at 3951.958 kb on + strand, within Pf6N2E2_3407 at 3951.959 kb on - strand, within Pf6N2E2_3407 at 3951.995 kb on + strand, within Pf6N2E2_3407 at 3951.996 kb on - strand, within Pf6N2E2_3407 at 3951.996 kb on - strand, within Pf6N2E2_3407 at 3952.058 kb on - strand at 3952.105 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,949,384 + Pf6N2E2_3404 0.54 -1.4 3,949,384 + Pf6N2E2_3404 0.54 +0.1 3,949,384 + Pf6N2E2_3404 0.54 -0.4 3,949,385 - Pf6N2E2_3404 0.54 -0.0 3,949,385 - Pf6N2E2_3404 0.54 -0.3 3,949,669 + +0.5 3,949,767 + Pf6N2E2_3405 0.11 -0.1 3,949,767 + Pf6N2E2_3405 0.11 -1.9 3,949,767 + Pf6N2E2_3405 0.11 +0.4 3,949,767 + Pf6N2E2_3405 0.11 -0.2 3,949,768 - Pf6N2E2_3405 0.11 -0.3 3,949,768 - Pf6N2E2_3405 0.11 -0.5 3,949,768 - Pf6N2E2_3405 0.11 -0.9 3,949,768 - Pf6N2E2_3405 0.11 -0.4 3,949,768 - Pf6N2E2_3405 0.11 +0.4 3,949,788 + Pf6N2E2_3405 0.14 +0.1 3,949,788 + Pf6N2E2_3405 0.14 -1.4 3,949,788 + Pf6N2E2_3405 0.14 -1.9 3,949,788 + Pf6N2E2_3405 0.14 -0.9 3,949,788 + Pf6N2E2_3405 0.14 -1.0 3,949,789 - Pf6N2E2_3405 0.14 +0.1 3,949,789 - Pf6N2E2_3405 0.14 -0.7 3,949,789 - Pf6N2E2_3405 0.14 +0.7 3,949,899 + Pf6N2E2_3405 0.31 +0.4 3,949,899 + Pf6N2E2_3405 0.31 -0.7 3,949,899 + Pf6N2E2_3405 0.31 +0.7 3,949,899 + Pf6N2E2_3405 0.31 +0.1 3,949,899 + Pf6N2E2_3405 0.31 +0.7 3,949,900 - Pf6N2E2_3405 0.31 -0.3 3,949,900 - Pf6N2E2_3405 0.31 -0.7 3,949,900 - Pf6N2E2_3405 0.31 -0.4 3,949,900 - Pf6N2E2_3405 0.31 -0.2 3,949,950 + Pf6N2E2_3405 0.39 -0.2 3,949,950 + Pf6N2E2_3405 0.39 -0.3 3,949,950 + Pf6N2E2_3405 0.39 +0.8 3,949,951 - Pf6N2E2_3405 0.39 +0.7 3,949,966 + Pf6N2E2_3405 0.41 -0.5 3,949,966 + Pf6N2E2_3405 0.41 -1.2 3,950,039 - Pf6N2E2_3405 0.52 +0.6 3,950,131 - Pf6N2E2_3405 0.66 +0.4 3,950,131 - Pf6N2E2_3405 0.66 -0.5 3,950,201 + Pf6N2E2_3405 0.77 +0.1 3,950,201 + Pf6N2E2_3405 0.77 -0.5 3,950,229 - Pf6N2E2_3405 0.81 -0.4 3,950,267 + Pf6N2E2_3405 0.87 +0.9 3,950,267 + Pf6N2E2_3405 0.87 +0.7 3,950,268 - Pf6N2E2_3405 0.87 +0.8 3,950,268 - Pf6N2E2_3405 0.87 +0.4 3,950,747 + Pf6N2E2_3406 0.50 +0.1 3,950,748 - Pf6N2E2_3406 0.50 +0.1 3,950,828 + Pf6N2E2_3406 0.60 -0.3 3,950,829 - Pf6N2E2_3406 0.60 -0.3 3,950,829 - Pf6N2E2_3406 0.60 -0.4 3,950,972 + Pf6N2E2_3406 0.78 -0.3 3,951,086 + +0.1 3,951,087 - +0.9 3,951,087 - +0.7 3,951,087 - -1.0 3,951,097 + -1.3 3,951,098 - -0.4 3,951,164 + -0.1 3,951,164 + +0.5 3,951,164 + +0.1 3,951,164 + -0.6 3,951,164 + -1.4 3,951,164 + -2.7 3,951,164 + +1.5 3,951,164 + -0.8 3,951,164 + -0.2 3,951,164 + +0.2 3,951,164 + -0.3 3,951,164 + -0.3 3,951,165 - -0.3 3,951,165 - -0.2 3,951,165 - -0.4 3,951,165 - -1.7 3,951,165 - -2.7 3,951,222 + -0.1 3,951,222 + -1.2 3,951,223 - +0.2 3,951,223 - +0.3 3,951,223 - +0.5 3,951,223 - -0.5 3,951,223 - -1.0 3,951,223 - -0.9 3,951,223 - -0.1 3,951,223 - +0.6 3,951,516 + Pf6N2E2_3407 0.34 -0.8 3,951,516 + Pf6N2E2_3407 0.34 +0.4 3,951,597 + Pf6N2E2_3407 0.43 -0.2 3,951,724 + Pf6N2E2_3407 0.58 +0.2 3,951,724 + Pf6N2E2_3407 0.58 -0.3 3,951,724 + Pf6N2E2_3407 0.58 -0.3 3,951,725 - Pf6N2E2_3407 0.58 -2.0 3,951,725 - Pf6N2E2_3407 0.58 +0.5 3,951,725 - Pf6N2E2_3407 0.58 +0.1 3,951,738 + Pf6N2E2_3407 0.59 -0.3 3,951,739 - Pf6N2E2_3407 0.60 -1.9 3,951,739 - Pf6N2E2_3407 0.60 -0.7 3,951,745 + Pf6N2E2_3407 0.60 -0.1 3,951,874 + Pf6N2E2_3407 0.75 -1.4 3,951,874 + Pf6N2E2_3407 0.75 +0.1 3,951,874 + Pf6N2E2_3407 0.75 -0.9 3,951,874 + Pf6N2E2_3407 0.75 -0.8 3,951,934 + Pf6N2E2_3407 0.82 +0.5 3,951,934 + Pf6N2E2_3407 0.82 +0.5 3,951,942 + Pf6N2E2_3407 0.83 -0.4 3,951,958 + Pf6N2E2_3407 0.85 +2.1 3,951,958 + Pf6N2E2_3407 0.85 +0.5 3,951,959 - Pf6N2E2_3407 0.85 -0.7 3,951,995 + Pf6N2E2_3407 0.89 -0.2 3,951,996 - Pf6N2E2_3407 0.89 -0.8 3,951,996 - Pf6N2E2_3407 0.89 -2.4 3,952,058 - +0.3 3,952,105 + -0.1
Or see this region's nucleotide sequence