Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2978 and Pf6N2E2_2979 are separated by 263 nucleotides Pf6N2E2_2979 and Pf6N2E2_2980 are separated by 152 nucleotides Pf6N2E2_2980 and Pf6N2E2_2981 are separated by 57 nucleotides Pf6N2E2_2981 and Pf6N2E2_2982 are separated by 205 nucleotides
Pf6N2E2_2978 - Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase, at 3,473,781 to 3,475,121
_2978
Pf6N2E2_2979 - Histone acetyltransferase HPA2 and related acetyltransferases, at 3,475,385 to 3,475,858
_2979
Pf6N2E2_2980 - tRNA pseudouridine synthase A (EC 4.2.1.70), at 3,476,011 to 3,476,652
_2980
Pf6N2E2_2981 - FIG00956655: hypothetical protein, at 3,476,710 to 3,477,171
_2981
Pf6N2E2_2982 - COG1720: Uncharacterized conserved protein, at 3,477,377 to 3,478,075
_2982
Position (kb)
3476
3477 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3475.344 kb on - strand at 3475.461 kb on + strand, within Pf6N2E2_2979 at 3475.493 kb on + strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.494 kb on - strand, within Pf6N2E2_2979 at 3475.529 kb on + strand, within Pf6N2E2_2979 at 3475.674 kb on - strand, within Pf6N2E2_2979 at 3475.674 kb on - strand, within Pf6N2E2_2979 at 3475.674 kb on - strand, within Pf6N2E2_2979 at 3475.742 kb on + strand, within Pf6N2E2_2979 at 3475.742 kb on + strand, within Pf6N2E2_2979 at 3475.743 kb on - strand, within Pf6N2E2_2979 at 3475.743 kb on - strand, within Pf6N2E2_2979 at 3475.824 kb on - strand at 3475.907 kb on - strand at 3475.907 kb on - strand at 3475.907 kb on - strand at 3475.907 kb on - strand at 3475.907 kb on - strand at 3475.907 kb on - strand at 3476.168 kb on + strand, within Pf6N2E2_2980 at 3476.168 kb on + strand, within Pf6N2E2_2980 at 3476.168 kb on + strand, within Pf6N2E2_2980 at 3476.168 kb on + strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.169 kb on - strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.368 kb on + strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.369 kb on - strand, within Pf6N2E2_2980 at 3476.434 kb on + strand, within Pf6N2E2_2980 at 3476.434 kb on + strand, within Pf6N2E2_2980 at 3476.434 kb on + strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.435 kb on - strand, within Pf6N2E2_2980 at 3476.626 kb on + strand at 3476.627 kb on - strand at 3476.651 kb on - strand at 3476.726 kb on + strand at 3476.726 kb on + strand at 3476.727 kb on - strand at 3476.743 kb on + strand at 3476.743 kb on + strand at 3476.743 kb on + strand at 3476.743 kb on + strand at 3476.743 kb on + strand at 3476.744 kb on - strand at 3476.744 kb on - strand at 3476.828 kb on - strand, within Pf6N2E2_2981 at 3476.828 kb on - strand, within Pf6N2E2_2981 at 3476.828 kb on - strand, within Pf6N2E2_2981 at 3477.103 kb on + strand, within Pf6N2E2_2981 at 3477.103 kb on + strand, within Pf6N2E2_2981 at 3477.104 kb on - strand, within Pf6N2E2_2981 at 3477.341 kb on + strand at 3477.383 kb on + strand at 3477.384 kb on - strand at 3477.384 kb on - strand at 3477.384 kb on - strand at 3477.384 kb on - strand at 3477.597 kb on + strand, within Pf6N2E2_2982 at 3477.597 kb on + strand, within Pf6N2E2_2982 at 3477.597 kb on + strand, within Pf6N2E2_2982 at 3477.598 kb on - strand, within Pf6N2E2_2982 at 3477.619 kb on + strand, within Pf6N2E2_2982 at 3477.619 kb on + strand, within Pf6N2E2_2982
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,475,344 - -1.0 3,475,461 + Pf6N2E2_2979 0.16 +0.2 3,475,493 + Pf6N2E2_2979 0.23 -0.5 3,475,494 - Pf6N2E2_2979 0.23 -0.9 3,475,494 - Pf6N2E2_2979 0.23 +0.2 3,475,494 - Pf6N2E2_2979 0.23 +0.2 3,475,494 - Pf6N2E2_2979 0.23 -0.7 3,475,494 - Pf6N2E2_2979 0.23 -0.4 3,475,494 - Pf6N2E2_2979 0.23 -1.7 3,475,494 - Pf6N2E2_2979 0.23 +0.1 3,475,529 + Pf6N2E2_2979 0.30 -0.3 3,475,674 - Pf6N2E2_2979 0.61 -1.5 3,475,674 - Pf6N2E2_2979 0.61 +0.3 3,475,674 - Pf6N2E2_2979 0.61 -0.5 3,475,742 + Pf6N2E2_2979 0.75 -0.7 3,475,742 + Pf6N2E2_2979 0.75 +0.4 3,475,743 - Pf6N2E2_2979 0.76 +0.8 3,475,743 - Pf6N2E2_2979 0.76 -0.7 3,475,824 - +1.7 3,475,907 - +0.2 3,475,907 - +0.2 3,475,907 - -0.5 3,475,907 - -0.4 3,475,907 - +0.4 3,475,907 - +0.5 3,476,168 + Pf6N2E2_2980 0.24 +0.3 3,476,168 + Pf6N2E2_2980 0.24 +0.4 3,476,168 + Pf6N2E2_2980 0.24 +0.8 3,476,168 + Pf6N2E2_2980 0.24 +2.9 3,476,169 - Pf6N2E2_2980 0.25 -1.0 3,476,169 - Pf6N2E2_2980 0.25 -0.1 3,476,169 - Pf6N2E2_2980 0.25 -0.5 3,476,169 - Pf6N2E2_2980 0.25 -1.2 3,476,169 - Pf6N2E2_2980 0.25 -2.6 3,476,169 - Pf6N2E2_2980 0.25 +0.5 3,476,169 - Pf6N2E2_2980 0.25 +0.2 3,476,368 + Pf6N2E2_2980 0.56 -0.1 3,476,368 + Pf6N2E2_2980 0.56 +0.0 3,476,368 + Pf6N2E2_2980 0.56 +0.1 3,476,368 + Pf6N2E2_2980 0.56 +1.6 3,476,368 + Pf6N2E2_2980 0.56 -1.1 3,476,368 + Pf6N2E2_2980 0.56 +0.8 3,476,369 - Pf6N2E2_2980 0.56 +1.1 3,476,369 - Pf6N2E2_2980 0.56 -1.1 3,476,369 - Pf6N2E2_2980 0.56 -1.1 3,476,369 - Pf6N2E2_2980 0.56 +1.2 3,476,369 - Pf6N2E2_2980 0.56 -0.1 3,476,369 - Pf6N2E2_2980 0.56 +0.7 3,476,369 - Pf6N2E2_2980 0.56 -0.9 3,476,369 - Pf6N2E2_2980 0.56 +0.4 3,476,369 - Pf6N2E2_2980 0.56 +0.6 3,476,369 - Pf6N2E2_2980 0.56 +2.6 3,476,434 + Pf6N2E2_2980 0.66 +1.7 3,476,434 + Pf6N2E2_2980 0.66 +0.3 3,476,434 + Pf6N2E2_2980 0.66 +0.8 3,476,435 - Pf6N2E2_2980 0.66 -2.4 3,476,435 - Pf6N2E2_2980 0.66 -2.2 3,476,435 - Pf6N2E2_2980 0.66 +0.8 3,476,435 - Pf6N2E2_2980 0.66 +0.9 3,476,435 - Pf6N2E2_2980 0.66 +0.4 3,476,435 - Pf6N2E2_2980 0.66 +0.3 3,476,435 - Pf6N2E2_2980 0.66 +0.5 3,476,626 + +0.4 3,476,627 - +0.7 3,476,651 - -0.3 3,476,726 + -0.1 3,476,726 + -0.2 3,476,727 - +0.4 3,476,743 + -1.4 3,476,743 + +0.2 3,476,743 + +0.0 3,476,743 + +0.9 3,476,743 + +0.3 3,476,744 - +0.4 3,476,744 - -0.4 3,476,828 - Pf6N2E2_2981 0.26 +0.1 3,476,828 - Pf6N2E2_2981 0.26 +0.0 3,476,828 - Pf6N2E2_2981 0.26 -1.8 3,477,103 + Pf6N2E2_2981 0.85 -0.8 3,477,103 + Pf6N2E2_2981 0.85 -0.6 3,477,104 - Pf6N2E2_2981 0.85 -0.5 3,477,341 + +0.5 3,477,383 + -0.7 3,477,384 - +0.0 3,477,384 - +0.8 3,477,384 - -1.1 3,477,384 - -0.1 3,477,597 + Pf6N2E2_2982 0.31 -1.8 3,477,597 + Pf6N2E2_2982 0.31 -0.0 3,477,597 + Pf6N2E2_2982 0.31 +0.9 3,477,598 - Pf6N2E2_2982 0.32 +0.4 3,477,619 + Pf6N2E2_2982 0.35 +0.4 3,477,619 + Pf6N2E2_2982 0.35 +0.2
Or see this region's nucleotide sequence