Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2705 and Pf6N2E2_2706 are separated by 102 nucleotides Pf6N2E2_2706 and Pf6N2E2_2707 overlap by 4 nucleotides Pf6N2E2_2707 and Pf6N2E2_2708 are separated by 8 nucleotides
Pf6N2E2_2705 - Thioredoxin reductase (EC 1.8.1.9), at 3,197,959 to 3,199,137
_2705
Pf6N2E2_2706 - Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54), at 3,199,240 to 3,200,160
_2706
Pf6N2E2_2707 - Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54), at 3,200,157 to 3,200,849
_2707
Pf6N2E2_2708 - Lactam utilization protein LamB, at 3,200,858 to 3,201,610
_2708
Position (kb)
3199
3200
3201 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3198.469 kb on + strand, within Pf6N2E2_2705 at 3198.469 kb on + strand, within Pf6N2E2_2705 at 3198.470 kb on - strand, within Pf6N2E2_2705 at 3198.757 kb on + strand, within Pf6N2E2_2705 at 3198.757 kb on + strand, within Pf6N2E2_2705 at 3198.757 kb on + strand, within Pf6N2E2_2705 at 3198.758 kb on - strand, within Pf6N2E2_2705 at 3198.758 kb on - strand, within Pf6N2E2_2705 at 3198.758 kb on - strand, within Pf6N2E2_2705 at 3198.758 kb on - strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.763 kb on + strand, within Pf6N2E2_2705 at 3198.781 kb on + strand, within Pf6N2E2_2705 at 3198.782 kb on - strand, within Pf6N2E2_2705 at 3198.814 kb on - strand, within Pf6N2E2_2705 at 3198.853 kb on + strand, within Pf6N2E2_2705 at 3198.853 kb on + strand, within Pf6N2E2_2705 at 3198.853 kb on + strand, within Pf6N2E2_2705 at 3198.853 kb on + strand, within Pf6N2E2_2705 at 3198.854 kb on - strand, within Pf6N2E2_2705 at 3198.854 kb on - strand, within Pf6N2E2_2705 at 3198.854 kb on - strand, within Pf6N2E2_2705 at 3198.854 kb on - strand, within Pf6N2E2_2705 at 3198.854 kb on - strand, within Pf6N2E2_2705 at 3198.866 kb on - strand, within Pf6N2E2_2705 at 3198.958 kb on + strand, within Pf6N2E2_2705 at 3198.958 kb on + strand, within Pf6N2E2_2705 at 3198.958 kb on + strand, within Pf6N2E2_2705 at 3198.958 kb on + strand, within Pf6N2E2_2705 at 3198.959 kb on - strand, within Pf6N2E2_2705 at 3198.959 kb on - strand, within Pf6N2E2_2705 at 3198.959 kb on - strand, within Pf6N2E2_2705 at 3198.988 kb on + strand, within Pf6N2E2_2705 at 3198.988 kb on + strand, within Pf6N2E2_2705 at 3198.989 kb on - strand at 3198.989 kb on - strand, within Pf6N2E2_2705 at 3198.989 kb on - strand, within Pf6N2E2_2705 at 3199.036 kb on + strand at 3199.037 kb on - strand at 3199.039 kb on - strand at 3199.085 kb on - strand at 3199.085 kb on - strand at 3199.316 kb on - strand at 3199.493 kb on + strand, within Pf6N2E2_2706 at 3199.494 kb on - strand, within Pf6N2E2_2706 at 3199.694 kb on + strand, within Pf6N2E2_2706 at 3199.695 kb on - strand, within Pf6N2E2_2706 at 3199.975 kb on - strand, within Pf6N2E2_2706 at 3200.483 kb on - strand, within Pf6N2E2_2707 at 3200.483 kb on - strand, within Pf6N2E2_2707 at 3200.576 kb on - strand, within Pf6N2E2_2707 at 3200.690 kb on - strand, within Pf6N2E2_2707 at 3200.690 kb on - strand, within Pf6N2E2_2707 at 3200.709 kb on - strand, within Pf6N2E2_2707 at 3200.710 kb on + strand, within Pf6N2E2_2707 at 3200.954 kb on - strand, within Pf6N2E2_2708 at 3200.954 kb on - strand, within Pf6N2E2_2708 at 3200.954 kb on - strand, within Pf6N2E2_2708 at 3201.090 kb on + strand, within Pf6N2E2_2708 at 3201.091 kb on - strand, within Pf6N2E2_2708
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,198,469 + Pf6N2E2_2705 0.43 +0.2 3,198,469 + Pf6N2E2_2705 0.43 -0.5 3,198,470 - Pf6N2E2_2705 0.43 +1.2 3,198,757 + Pf6N2E2_2705 0.68 -0.5 3,198,757 + Pf6N2E2_2705 0.68 +0.7 3,198,757 + Pf6N2E2_2705 0.68 +0.4 3,198,758 - Pf6N2E2_2705 0.68 +1.2 3,198,758 - Pf6N2E2_2705 0.68 +1.4 3,198,758 - Pf6N2E2_2705 0.68 -0.7 3,198,758 - Pf6N2E2_2705 0.68 -1.2 3,198,763 + Pf6N2E2_2705 0.68 -0.3 3,198,763 + Pf6N2E2_2705 0.68 +1.0 3,198,763 + Pf6N2E2_2705 0.68 +0.3 3,198,763 + Pf6N2E2_2705 0.68 -0.5 3,198,763 + Pf6N2E2_2705 0.68 -3.4 3,198,763 + Pf6N2E2_2705 0.68 +0.7 3,198,763 + Pf6N2E2_2705 0.68 +0.2 3,198,763 + Pf6N2E2_2705 0.68 -0.7 3,198,781 + Pf6N2E2_2705 0.70 -0.6 3,198,782 - Pf6N2E2_2705 0.70 +0.9 3,198,814 - Pf6N2E2_2705 0.73 +0.6 3,198,853 + Pf6N2E2_2705 0.76 -0.9 3,198,853 + Pf6N2E2_2705 0.76 +0.0 3,198,853 + Pf6N2E2_2705 0.76 +1.9 3,198,853 + Pf6N2E2_2705 0.76 -1.1 3,198,854 - Pf6N2E2_2705 0.76 -0.3 3,198,854 - Pf6N2E2_2705 0.76 +0.2 3,198,854 - Pf6N2E2_2705 0.76 -1.2 3,198,854 - Pf6N2E2_2705 0.76 -1.3 3,198,854 - Pf6N2E2_2705 0.76 -0.3 3,198,866 - Pf6N2E2_2705 0.77 +1.3 3,198,958 + Pf6N2E2_2705 0.85 -1.3 3,198,958 + Pf6N2E2_2705 0.85 -0.9 3,198,958 + Pf6N2E2_2705 0.85 -0.4 3,198,958 + Pf6N2E2_2705 0.85 -0.0 3,198,959 - Pf6N2E2_2705 0.85 -0.2 3,198,959 - Pf6N2E2_2705 0.85 +0.1 3,198,959 - Pf6N2E2_2705 0.85 +1.4 3,198,988 + Pf6N2E2_2705 0.87 -0.5 3,198,988 + Pf6N2E2_2705 0.87 +0.8 3,198,989 - +0.8 3,198,989 - Pf6N2E2_2705 0.87 +0.3 3,198,989 - Pf6N2E2_2705 0.87 +0.2 3,199,036 + +0.2 3,199,037 - -0.1 3,199,039 - +0.1 3,199,085 - +0.2 3,199,085 - +0.4 3,199,316 - +0.8 3,199,493 + Pf6N2E2_2706 0.27 -0.5 3,199,494 - Pf6N2E2_2706 0.28 -0.2 3,199,694 + Pf6N2E2_2706 0.49 +0.9 3,199,695 - Pf6N2E2_2706 0.49 +0.9 3,199,975 - Pf6N2E2_2706 0.80 -1.6 3,200,483 - Pf6N2E2_2707 0.47 +0.8 3,200,483 - Pf6N2E2_2707 0.47 -0.0 3,200,576 - Pf6N2E2_2707 0.60 +0.5 3,200,690 - Pf6N2E2_2707 0.77 +0.6 3,200,690 - Pf6N2E2_2707 0.77 -0.1 3,200,709 - Pf6N2E2_2707 0.80 +0.8 3,200,710 + Pf6N2E2_2707 0.80 +0.3 3,200,954 - Pf6N2E2_2708 0.13 +0.5 3,200,954 - Pf6N2E2_2708 0.13 +0.2 3,200,954 - Pf6N2E2_2708 0.13 +0.5 3,201,090 + Pf6N2E2_2708 0.31 -0.5 3,201,091 - Pf6N2E2_2708 0.31 -1.4
Or see this region's nucleotide sequence