Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_21 and Pf6N2E2_22 are separated by 145 nucleotides Pf6N2E2_22 and Pf6N2E2_23 are separated by 275 nucleotides
Pf6N2E2_21 - Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis, at 56,134 to 56,616
_21
Pf6N2E2_22 - L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis, at 56,762 to 58,096
_22
Pf6N2E2_23 - Hybrid sensory histidine kinase in two-component regulatory system with EvgA, at 58,372 to 61,572
_23
Position (kb) 56
57
58
59 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 55.762 kb on - strand at 55.762 kb on - strand at 55.762 kb on - strand at 55.773 kb on + strand at 55.774 kb on - strand at 55.836 kb on + strand at 55.845 kb on + strand at 55.845 kb on + strand at 55.916 kb on + strand at 55.917 kb on - strand at 55.917 kb on - strand at 55.917 kb on - strand at 55.917 kb on - strand at 55.935 kb on + strand at 55.935 kb on + strand at 55.935 kb on + strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.936 kb on - strand at 55.944 kb on + strand at 55.944 kb on + strand at 55.945 kb on - strand at 55.997 kb on + strand at 55.998 kb on - strand at 56.021 kb on - strand at 56.029 kb on + strand at 56.104 kb on + strand at 56.104 kb on + strand at 56.146 kb on + strand at 56.147 kb on - strand at 56.147 kb on - strand at 56.224 kb on + strand, within Pf6N2E2_21 at 56.224 kb on + strand, within Pf6N2E2_21 at 56.225 kb on - strand, within Pf6N2E2_21 at 56.225 kb on - strand, within Pf6N2E2_21 at 56.284 kb on + strand, within Pf6N2E2_21 at 56.284 kb on + strand, within Pf6N2E2_21 at 56.328 kb on + strand, within Pf6N2E2_21 at 56.329 kb on - strand, within Pf6N2E2_21 at 56.614 kb on + strand at 56.614 kb on + strand at 56.624 kb on - strand at 57.017 kb on + strand, within Pf6N2E2_22 at 57.068 kb on + strand, within Pf6N2E2_22 at 57.095 kb on + strand, within Pf6N2E2_22 at 57.096 kb on - strand, within Pf6N2E2_22 at 57.234 kb on + strand, within Pf6N2E2_22 at 57.235 kb on - strand, within Pf6N2E2_22 at 57.235 kb on - strand, within Pf6N2E2_22 at 57.238 kb on + strand, within Pf6N2E2_22 at 57.238 kb on + strand, within Pf6N2E2_22 at 57.238 kb on + strand, within Pf6N2E2_22 at 57.238 kb on + strand, within Pf6N2E2_22 at 57.239 kb on - strand, within Pf6N2E2_22 at 57.338 kb on + strand, within Pf6N2E2_22 at 57.339 kb on - strand, within Pf6N2E2_22 at 57.614 kb on + strand, within Pf6N2E2_22 at 57.614 kb on + strand, within Pf6N2E2_22 at 57.614 kb on + strand, within Pf6N2E2_22 at 57.615 kb on - strand, within Pf6N2E2_22 at 57.615 kb on - strand, within Pf6N2E2_22 at 57.615 kb on - strand, within Pf6N2E2_22 at 57.650 kb on + strand, within Pf6N2E2_22 at 57.712 kb on + strand, within Pf6N2E2_22 at 57.712 kb on + strand, within Pf6N2E2_22 at 57.713 kb on - strand, within Pf6N2E2_22 at 57.899 kb on + strand, within Pf6N2E2_22 at 57.899 kb on + strand, within Pf6N2E2_22 at 57.899 kb on + strand, within Pf6N2E2_22 at 57.899 kb on + strand, within Pf6N2E2_22 at 57.900 kb on - strand, within Pf6N2E2_22 at 57.938 kb on + strand, within Pf6N2E2_22 at 57.938 kb on + strand, within Pf6N2E2_22 at 57.938 kb on + strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.939 kb on - strand, within Pf6N2E2_22 at 57.980 kb on - strand at 58.031 kb on + strand at 58.031 kb on + strand at 58.031 kb on + strand at 58.032 kb on - strand at 58.032 kb on - strand at 58.092 kb on + strand at 58.093 kb on - strand at 58.094 kb on + strand at 58.094 kb on + strand at 58.095 kb on - strand at 58.095 kb on - strand at 58.129 kb on + strand at 58.129 kb on + strand at 58.130 kb on - strand at 58.222 kb on + strand at 58.277 kb on + strand at 58.277 kb on + strand at 58.277 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.317 kb on + strand at 58.318 kb on - strand at 58.318 kb on - strand at 58.318 kb on - strand at 58.318 kb on - strand at 58.318 kb on - strand at 58.492 kb on + strand at 58.610 kb on - strand at 58.610 kb on - strand at 58.630 kb on + strand at 58.818 kb on - strand, within Pf6N2E2_23 at 58.883 kb on - strand, within Pf6N2E2_23 at 58.883 kb on - strand, within Pf6N2E2_23 at 58.883 kb on - strand, within Pf6N2E2_23 at 58.888 kb on + strand, within Pf6N2E2_23 at 58.889 kb on - strand, within Pf6N2E2_23 at 58.889 kb on - strand, within Pf6N2E2_23 at 58.997 kb on - strand, within Pf6N2E2_23 at 59.023 kb on + strand, within Pf6N2E2_23 at 59.024 kb on - strand, within Pf6N2E2_23 at 59.041 kb on + strand, within Pf6N2E2_23 at 59.052 kb on + strand, within Pf6N2E2_23 at 59.052 kb on + strand, within Pf6N2E2_23 at 59.053 kb on - strand, within Pf6N2E2_23
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 55,762 - +0.4 55,762 - +0.4 55,762 - +2.0 55,773 + -1.5 55,774 - +2.0 55,836 + -0.0 55,845 + -1.5 55,845 + +0.1 55,916 + -0.7 55,917 - +0.4 55,917 - -0.3 55,917 - +0.3 55,917 - +1.1 55,935 + -1.3 55,935 + -1.5 55,935 + -1.9 55,936 - -0.2 55,936 - +1.2 55,936 - -0.4 55,936 - -0.0 55,936 - +0.1 55,936 - +0.3 55,936 - -0.0 55,944 + -1.0 55,944 + -1.7 55,945 - -0.0 55,997 + +0.4 55,998 - +0.1 56,021 - -0.0 56,029 + -1.0 56,104 + -1.2 56,104 + -1.0 56,146 + +0.4 56,147 - -1.3 56,147 - +0.5 56,224 + Pf6N2E2_21 0.19 +1.5 56,224 + Pf6N2E2_21 0.19 +1.0 56,225 - Pf6N2E2_21 0.19 +0.4 56,225 - Pf6N2E2_21 0.19 +0.8 56,284 + Pf6N2E2_21 0.31 +1.9 56,284 + Pf6N2E2_21 0.31 -0.6 56,328 + Pf6N2E2_21 0.40 +0.6 56,329 - Pf6N2E2_21 0.40 +1.0 56,614 + -0.5 56,614 + -0.2 56,624 - +1.1 57,017 + Pf6N2E2_22 0.19 +1.1 57,068 + Pf6N2E2_22 0.23 +1.5 57,095 + Pf6N2E2_22 0.25 +0.4 57,096 - Pf6N2E2_22 0.25 +2.4 57,234 + Pf6N2E2_22 0.35 +1.2 57,235 - Pf6N2E2_22 0.35 +1.0 57,235 - Pf6N2E2_22 0.35 +1.0 57,238 + Pf6N2E2_22 0.36 +0.8 57,238 + Pf6N2E2_22 0.36 +1.1 57,238 + Pf6N2E2_22 0.36 +0.6 57,238 + Pf6N2E2_22 0.36 +1.4 57,239 - Pf6N2E2_22 0.36 +1.5 57,338 + Pf6N2E2_22 0.43 +1.4 57,339 - Pf6N2E2_22 0.43 +2.3 57,614 + Pf6N2E2_22 0.64 +2.0 57,614 + Pf6N2E2_22 0.64 +2.1 57,614 + Pf6N2E2_22 0.64 +0.9 57,615 - Pf6N2E2_22 0.64 +1.4 57,615 - Pf6N2E2_22 0.64 +1.1 57,615 - Pf6N2E2_22 0.64 +1.5 57,650 + Pf6N2E2_22 0.67 +1.9 57,712 + Pf6N2E2_22 0.71 +1.8 57,712 + Pf6N2E2_22 0.71 +1.4 57,713 - Pf6N2E2_22 0.71 +0.4 57,899 + Pf6N2E2_22 0.85 +2.8 57,899 + Pf6N2E2_22 0.85 +0.6 57,899 + Pf6N2E2_22 0.85 +1.8 57,899 + Pf6N2E2_22 0.85 +0.9 57,900 - Pf6N2E2_22 0.85 +0.5 57,938 + Pf6N2E2_22 0.88 -0.0 57,938 + Pf6N2E2_22 0.88 -0.5 57,938 + Pf6N2E2_22 0.88 -0.0 57,939 - Pf6N2E2_22 0.88 +0.8 57,939 - Pf6N2E2_22 0.88 +1.5 57,939 - Pf6N2E2_22 0.88 +1.2 57,939 - Pf6N2E2_22 0.88 +2.5 57,939 - Pf6N2E2_22 0.88 +0.7 57,939 - Pf6N2E2_22 0.88 +0.2 57,939 - Pf6N2E2_22 0.88 +0.7 57,980 - +2.1 58,031 + +0.4 58,031 + +1.4 58,031 + +2.5 58,032 - +1.0 58,032 - +2.0 58,092 + +0.4 58,093 - +0.9 58,094 + +0.0 58,094 + +1.2 58,095 - +1.9 58,095 - -0.0 58,129 + -0.8 58,129 + +0.4 58,130 - +0.3 58,222 + +1.5 58,277 + +0.2 58,277 + +0.5 58,277 + -0.8 58,317 + +0.5 58,317 + +0.2 58,317 + +0.6 58,317 + +0.7 58,317 + -0.3 58,317 + +0.5 58,317 + +0.5 58,318 - +0.8 58,318 - +1.3 58,318 - +0.4 58,318 - -1.0 58,318 - +0.5 58,492 + -0.2 58,610 - -0.9 58,610 - -1.2 58,630 + -0.5 58,818 - Pf6N2E2_23 0.14 -0.5 58,883 - Pf6N2E2_23 0.16 +2.3 58,883 - Pf6N2E2_23 0.16 +0.9 58,883 - Pf6N2E2_23 0.16 +0.0 58,888 + Pf6N2E2_23 0.16 +0.7 58,889 - Pf6N2E2_23 0.16 +0.1 58,889 - Pf6N2E2_23 0.16 -0.1 58,997 - Pf6N2E2_23 0.20 +0.4 59,023 + Pf6N2E2_23 0.20 +0.5 59,024 - Pf6N2E2_23 0.20 +0.9 59,041 + Pf6N2E2_23 0.21 +0.3 59,052 + Pf6N2E2_23 0.21 -1.3 59,052 + Pf6N2E2_23 0.21 -0.5 59,053 - Pf6N2E2_23 0.21 +0.0
Or see this region's nucleotide sequence