Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1271 and Pf6N2E2_1272 are separated by 190 nucleotides Pf6N2E2_1272 and Pf6N2E2_1273 overlap by 4 nucleotides
Pf6N2E2_1271 - Acriflavin resistance plasma membrane protein, at 1,497,668 to 1,500,772
_1271
Pf6N2E2_1272 - Acriflavin resistance plasma membrane protein, at 1,500,963 to 1,504,058
_1272
Pf6N2E2_1273 - Probable RND efflux membrane fusion protein, at 1,504,055 to 1,505,356
_1273
Position (kb)
1500
1501
1502
1503
1504
1505 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1499.964 kb on + strand, within Pf6N2E2_1271 at 1499.965 kb on - strand, within Pf6N2E2_1271 at 1500.184 kb on - strand, within Pf6N2E2_1271 at 1500.248 kb on + strand, within Pf6N2E2_1271 at 1500.248 kb on + strand, within Pf6N2E2_1271 at 1500.249 kb on - strand, within Pf6N2E2_1271 at 1500.249 kb on - strand, within Pf6N2E2_1271 at 1500.266 kb on + strand, within Pf6N2E2_1271 at 1500.310 kb on - strand, within Pf6N2E2_1271 at 1500.310 kb on - strand, within Pf6N2E2_1271 at 1500.385 kb on + strand, within Pf6N2E2_1271 at 1500.387 kb on + strand, within Pf6N2E2_1271 at 1500.387 kb on + strand, within Pf6N2E2_1271 at 1500.388 kb on - strand, within Pf6N2E2_1271 at 1500.388 kb on - strand, within Pf6N2E2_1271 at 1500.397 kb on + strand, within Pf6N2E2_1271 at 1500.508 kb on + strand at 1500.509 kb on - strand at 1500.941 kb on + strand at 1500.942 kb on - strand at 1500.942 kb on - strand at 1500.942 kb on - strand at 1500.942 kb on - strand at 1501.022 kb on - strand at 1501.027 kb on + strand at 1501.028 kb on - strand at 1501.028 kb on - strand at 1501.143 kb on + strand at 1501.143 kb on + strand at 1501.143 kb on + strand at 1501.144 kb on - strand at 1501.144 kb on - strand at 1501.144 kb on - strand at 1501.197 kb on + strand at 1501.210 kb on + strand at 1501.210 kb on + strand at 1501.211 kb on - strand at 1501.446 kb on + strand, within Pf6N2E2_1272 at 1501.446 kb on + strand, within Pf6N2E2_1272 at 1501.447 kb on - strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.448 kb on + strand, within Pf6N2E2_1272 at 1501.449 kb on - strand, within Pf6N2E2_1272 at 1501.449 kb on - strand, within Pf6N2E2_1272 at 1501.449 kb on - strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.450 kb on + strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.451 kb on - strand, within Pf6N2E2_1272 at 1501.487 kb on + strand, within Pf6N2E2_1272 at 1501.488 kb on - strand, within Pf6N2E2_1272 at 1501.713 kb on + strand, within Pf6N2E2_1272 at 1501.822 kb on + strand, within Pf6N2E2_1272 at 1501.822 kb on + strand, within Pf6N2E2_1272 at 1501.823 kb on - strand, within Pf6N2E2_1272 at 1501.823 kb on - strand, within Pf6N2E2_1272 at 1501.823 kb on - strand, within Pf6N2E2_1272 at 1501.858 kb on + strand, within Pf6N2E2_1272 at 1501.859 kb on - strand, within Pf6N2E2_1272 at 1501.859 kb on - strand, within Pf6N2E2_1272 at 1502.046 kb on + strand, within Pf6N2E2_1272 at 1502.422 kb on + strand, within Pf6N2E2_1272 at 1502.440 kb on - strand, within Pf6N2E2_1272 at 1502.903 kb on + strand, within Pf6N2E2_1272 at 1502.927 kb on - strand, within Pf6N2E2_1272 at 1503.045 kb on + strand, within Pf6N2E2_1272 at 1503.045 kb on + strand, within Pf6N2E2_1272 at 1503.317 kb on - strand, within Pf6N2E2_1272 at 1503.443 kb on + strand, within Pf6N2E2_1272 at 1503.443 kb on + strand, within Pf6N2E2_1272 at 1503.674 kb on - strand, within Pf6N2E2_1272 at 1503.785 kb on + strand at 1504.255 kb on + strand, within Pf6N2E2_1273 at 1504.256 kb on - strand, within Pf6N2E2_1273 at 1504.324 kb on - strand, within Pf6N2E2_1273 at 1504.815 kb on + strand, within Pf6N2E2_1273 at 1504.816 kb on - strand, within Pf6N2E2_1273 at 1504.901 kb on + strand, within Pf6N2E2_1273 at 1504.972 kb on - strand, within Pf6N2E2_1273
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,499,964 + Pf6N2E2_1271 0.74 -0.1 1,499,965 - Pf6N2E2_1271 0.74 +2.0 1,500,184 - Pf6N2E2_1271 0.81 -2.5 1,500,248 + Pf6N2E2_1271 0.83 -1.3 1,500,248 + Pf6N2E2_1271 0.83 +0.2 1,500,249 - Pf6N2E2_1271 0.83 +0.7 1,500,249 - Pf6N2E2_1271 0.83 +0.8 1,500,266 + Pf6N2E2_1271 0.84 +2.5 1,500,310 - Pf6N2E2_1271 0.85 -1.6 1,500,310 - Pf6N2E2_1271 0.85 +0.4 1,500,385 + Pf6N2E2_1271 0.88 -1.4 1,500,387 + Pf6N2E2_1271 0.88 -1.3 1,500,387 + Pf6N2E2_1271 0.88 -0.3 1,500,388 - Pf6N2E2_1271 0.88 -2.6 1,500,388 - Pf6N2E2_1271 0.88 +0.4 1,500,397 + Pf6N2E2_1271 0.88 -1.2 1,500,508 + -0.1 1,500,509 - -0.0 1,500,941 + +0.8 1,500,942 - +0.0 1,500,942 - +0.5 1,500,942 - +0.6 1,500,942 - -2.9 1,501,022 - -0.1 1,501,027 + -1.0 1,501,028 - -1.0 1,501,028 - -0.3 1,501,143 + -0.8 1,501,143 + +0.1 1,501,143 + -0.3 1,501,144 - -2.1 1,501,144 - -2.6 1,501,144 - -2.7 1,501,197 + +0.2 1,501,210 + -1.1 1,501,210 + +0.8 1,501,211 - -1.0 1,501,446 + Pf6N2E2_1272 0.16 +0.2 1,501,446 + Pf6N2E2_1272 0.16 -0.3 1,501,447 - Pf6N2E2_1272 0.16 -0.3 1,501,448 + Pf6N2E2_1272 0.16 -2.9 1,501,448 + Pf6N2E2_1272 0.16 +1.7 1,501,448 + Pf6N2E2_1272 0.16 -0.8 1,501,448 + Pf6N2E2_1272 0.16 -1.1 1,501,448 + Pf6N2E2_1272 0.16 -1.1 1,501,448 + Pf6N2E2_1272 0.16 -0.0 1,501,449 - Pf6N2E2_1272 0.16 -0.1 1,501,449 - Pf6N2E2_1272 0.16 +1.6 1,501,449 - Pf6N2E2_1272 0.16 -0.9 1,501,450 + Pf6N2E2_1272 0.16 -1.5 1,501,450 + Pf6N2E2_1272 0.16 -2.5 1,501,450 + Pf6N2E2_1272 0.16 -0.8 1,501,450 + Pf6N2E2_1272 0.16 -0.1 1,501,450 + Pf6N2E2_1272 0.16 +0.1 1,501,450 + Pf6N2E2_1272 0.16 +0.8 1,501,450 + Pf6N2E2_1272 0.16 -0.9 1,501,450 + Pf6N2E2_1272 0.16 -2.7 1,501,450 + Pf6N2E2_1272 0.16 -0.8 1,501,450 + Pf6N2E2_1272 0.16 +1.2 1,501,450 + Pf6N2E2_1272 0.16 -2.5 1,501,450 + Pf6N2E2_1272 0.16 -0.2 1,501,450 + Pf6N2E2_1272 0.16 -1.9 1,501,451 - Pf6N2E2_1272 0.16 -1.9 1,501,451 - Pf6N2E2_1272 0.16 -1.3 1,501,451 - Pf6N2E2_1272 0.16 -0.1 1,501,451 - Pf6N2E2_1272 0.16 -0.6 1,501,451 - Pf6N2E2_1272 0.16 -1.9 1,501,451 - Pf6N2E2_1272 0.16 +0.2 1,501,451 - Pf6N2E2_1272 0.16 -0.3 1,501,451 - Pf6N2E2_1272 0.16 -0.6 1,501,487 + Pf6N2E2_1272 0.17 -1.3 1,501,488 - Pf6N2E2_1272 0.17 -1.6 1,501,713 + Pf6N2E2_1272 0.24 -1.5 1,501,822 + Pf6N2E2_1272 0.28 -1.9 1,501,822 + Pf6N2E2_1272 0.28 -2.2 1,501,823 - Pf6N2E2_1272 0.28 -0.3 1,501,823 - Pf6N2E2_1272 0.28 -0.8 1,501,823 - Pf6N2E2_1272 0.28 -0.9 1,501,858 + Pf6N2E2_1272 0.29 -1.6 1,501,859 - Pf6N2E2_1272 0.29 +0.2 1,501,859 - Pf6N2E2_1272 0.29 -0.4 1,502,046 + Pf6N2E2_1272 0.35 -1.3 1,502,422 + Pf6N2E2_1272 0.47 -1.1 1,502,440 - Pf6N2E2_1272 0.48 +0.2 1,502,903 + Pf6N2E2_1272 0.63 -1.0 1,502,927 - Pf6N2E2_1272 0.63 -1.6 1,503,045 + Pf6N2E2_1272 0.67 -0.3 1,503,045 + Pf6N2E2_1272 0.67 -3.0 1,503,317 - Pf6N2E2_1272 0.76 -0.7 1,503,443 + Pf6N2E2_1272 0.80 -1.0 1,503,443 + Pf6N2E2_1272 0.80 -1.2 1,503,674 - Pf6N2E2_1272 0.88 +0.8 1,503,785 + -1.6 1,504,255 + Pf6N2E2_1273 0.15 +0.8 1,504,256 - Pf6N2E2_1273 0.15 -1.3 1,504,324 - Pf6N2E2_1273 0.21 -0.3 1,504,815 + Pf6N2E2_1273 0.58 -1.2 1,504,816 - Pf6N2E2_1273 0.58 -0.3 1,504,901 + Pf6N2E2_1273 0.65 +0.8 1,504,972 - Pf6N2E2_1273 0.70 -0.9
Or see this region's nucleotide sequence