Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09480

Experiment: m.b. Benzethonium chloride 0.02 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c09470 and PGA1_c09480 are separated by 723 nucleotidesPGA1_c09480 and PGA1_c09490 are separated by 3 nucleotides PGA1_c09470: PGA1_c09470 - putative ATP-binding protein, at 970,099 to 971,169 _c09470 PGA1_c09480: PGA1_c09480 - putative protein MraZ, at 971,893 to 972,474 _c09480 PGA1_c09490: PGA1_c09490 - S-adenosyl-L-methionine-dependent methyltransferase MraW, at 972,478 to 973,485 _c09490 Position (kb) 971 972 973Strain fitness (log2 ratio) -3 -2 -1 0 1at 970.906 kb on + strand, within PGA1_c09470at 971.019 kb on - strand, within PGA1_c09470at 971.116 kb on + strandat 971.124 kb on - strandat 971.138 kb on + strandat 971.143 kb on + strandat 971.148 kb on + strandat 971.151 kb on - strandat 971.172 kb on - strandat 971.200 kb on + strandat 971.237 kb on + strandat 971.237 kb on + strandat 971.237 kb on + strandat 971.287 kb on + strandat 971.438 kb on + strandat 972.219 kb on + strand, within PGA1_c09480at 972.325 kb on + strand, within PGA1_c09480at 972.352 kb on + strand, within PGA1_c09480at 972.367 kb on + strand, within PGA1_c09480at 972.423 kb on + strandat 973.471 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.02 mM
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970,906 + PGA1_c09470 0.75 +1.7
971,019 - PGA1_c09470 0.86 +1.6
971,116 + -0.3
971,124 - +1.2
971,138 + -0.3
971,143 + -0.5
971,148 + +0.4
971,151 - -1.3
971,172 - -0.3
971,200 + -0.3
971,237 + -0.7
971,237 + -0.8
971,237 + -0.1
971,287 + -3.1
971,438 + -0.4
972,219 + PGA1_c09480 0.56 -1.9
972,325 + PGA1_c09480 0.74 -2.8
972,352 + PGA1_c09480 0.79 -0.3
972,367 + PGA1_c09480 0.81 -2.7
972,423 + -1.3
973,471 + -0.2

Or see this region's nucleotide sequence