Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3136 and Dsui_3137 are separated by 89 nucleotides Dsui_3137 and Dsui_3138 are separated by 83 nucleotides Dsui_3138 and Dsui_3139 are separated by 21 nucleotides
Dsui_3136: Dsui_3136 - GTP-binding protein HflX, at 3,358,234 to 3,359,421
_3136
Dsui_3137: Dsui_3137 - RNA chaperone Hfq, at 3,359,511 to 3,359,750
_3137
Dsui_3138: Dsui_3138 - ribosome-associated GTPase EngA, at 3,359,834 to 3,361,219
_3138
Dsui_3139: Dsui_3139 - outer membrane assembly lipoprotein YfgL, at 3,361,241 to 3,362,389
_3139
Position (kb)
3359
3360
3361
3362 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3358.883 kb on - strand, within Dsui_3136 at 3358.915 kb on - strand, within Dsui_3136 at 3358.979 kb on + strand, within Dsui_3136 at 3358.990 kb on + strand, within Dsui_3136 at 3359.115 kb on - strand, within Dsui_3136 at 3359.119 kb on - strand, within Dsui_3136 at 3359.125 kb on - strand, within Dsui_3136 at 3359.151 kb on + strand, within Dsui_3136 at 3359.249 kb on - strand, within Dsui_3136 at 3359.280 kb on - strand, within Dsui_3136 at 3359.299 kb on + strand, within Dsui_3136 at 3359.333 kb on + strand at 3359.333 kb on + strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.532 kb on - strand at 3359.753 kb on - strand at 3359.826 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand at 3361.257 kb on - strand at 3361.400 kb on - strand, within Dsui_3139 at 3361.523 kb on - strand, within Dsui_3139 at 3361.617 kb on - strand, within Dsui_3139 at 3361.657 kb on - strand, within Dsui_3139 at 3361.659 kb on - strand, within Dsui_3139 at 3361.715 kb on - strand, within Dsui_3139 at 3361.721 kb on - strand, within Dsui_3139 at 3362.148 kb on - strand, within Dsui_3139 at 3362.209 kb on - strand, within Dsui_3139
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,358,883 - Dsui_3136 0.55 +0.0 3,358,915 - Dsui_3136 0.57 +0.1 3,358,979 + Dsui_3136 0.63 -1.5 3,358,990 + Dsui_3136 0.64 -0.5 3,359,115 - Dsui_3136 0.74 -0.0 3,359,119 - Dsui_3136 0.74 -0.1 3,359,125 - Dsui_3136 0.75 +0.1 3,359,151 + Dsui_3136 0.77 -2.5 3,359,249 - Dsui_3136 0.85 -0.1 3,359,280 - Dsui_3136 0.88 -0.2 3,359,299 + Dsui_3136 0.90 -1.5 3,359,333 + -2.1 3,359,333 + -2.1 3,359,367 - -0.1 3,359,367 - -0.4 3,359,367 - +0.1 3,359,532 - -0.6 3,359,753 - -1.6 3,359,826 - +0.0 3,359,901 - -0.0 3,359,901 - -0.1 3,359,901 - -0.2 3,361,257 - -0.0 3,361,400 - Dsui_3139 0.14 -3.4 3,361,523 - Dsui_3139 0.25 -3.0 3,361,617 - Dsui_3139 0.33 -3.7 3,361,657 - Dsui_3139 0.36 -3.0 3,361,659 - Dsui_3139 0.36 -3.8 3,361,715 - Dsui_3139 0.41 -1.5 3,361,721 - Dsui_3139 0.42 -3.7 3,362,148 - Dsui_3139 0.79 -1.8 3,362,209 - Dsui_3139 0.84 -4.3
Or see this region's nucleotide sequence