Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3091 and Dsui_3092 are separated by 122 nucleotides Dsui_3092 and Dsui_3093 are separated by 318 nucleotides Dsui_3093 and Dsui_3094 are separated by 136 nucleotides
Dsui_3091: Dsui_3091 - integral membrane protein, TerC family, at 3,308,780 to 3,309,745
_3091
Dsui_3092: Dsui_3092 - ATP-dependent DNA helicase RecQ, at 3,309,868 to 3,311,706
_3092
Dsui_3093: Dsui_3093 - hypothetical protein, at 3,312,025 to 3,312,339
_3093
Dsui_3094: Dsui_3094 - putative HD superfamily hydrolase, at 3,312,476 to 3,313,132
_3094
Position (kb)
3309
3310
3311
3312 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3308.903 kb on + strand, within Dsui_3091 at 3308.903 kb on + strand, within Dsui_3091 at 3308.911 kb on - strand at 3308.925 kb on + strand, within Dsui_3091 at 3308.931 kb on + strand, within Dsui_3091 at 3309.061 kb on + strand, within Dsui_3091 at 3309.115 kb on + strand, within Dsui_3091 at 3309.147 kb on + strand, within Dsui_3091 at 3309.212 kb on - strand at 3309.235 kb on + strand, within Dsui_3091 at 3309.489 kb on - strand at 3309.538 kb on - strand, within Dsui_3091 at 3309.592 kb on - strand, within Dsui_3091 at 3309.612 kb on + strand, within Dsui_3091 at 3309.823 kb on + strand at 3310.041 kb on + strand at 3310.130 kb on - strand, within Dsui_3092 at 3310.162 kb on + strand, within Dsui_3092 at 3310.504 kb on + strand, within Dsui_3092 at 3310.535 kb on - strand, within Dsui_3092 at 3310.542 kb on - strand, within Dsui_3092 at 3310.574 kb on - strand, within Dsui_3092 at 3310.702 kb on - strand at 3310.796 kb on + strand, within Dsui_3092 at 3310.806 kb on + strand, within Dsui_3092 at 3310.989 kb on - strand, within Dsui_3092 at 3310.989 kb on - strand, within Dsui_3092 at 3311.153 kb on + strand, within Dsui_3092 at 3311.212 kb on + strand at 3311.214 kb on - strand, within Dsui_3092 at 3311.257 kb on - strand, within Dsui_3092 at 3311.269 kb on + strand, within Dsui_3092 at 3311.323 kb on - strand, within Dsui_3092 at 3311.371 kb on - strand, within Dsui_3092 at 3311.450 kb on - strand, within Dsui_3092 at 3311.469 kb on + strand, within Dsui_3092 at 3311.561 kb on + strand at 3311.590 kb on - strand at 3311.615 kb on + strand at 3311.816 kb on - strand at 3311.816 kb on - strand at 3311.854 kb on - strand at 3311.855 kb on - strand at 3311.865 kb on + strand at 3311.865 kb on + strand at 3311.873 kb on - strand at 3311.975 kb on - strand at 3312.020 kb on + strand at 3312.105 kb on + strand, within Dsui_3093 at 3312.137 kb on + strand, within Dsui_3093 at 3312.248 kb on + strand at 3312.276 kb on - strand at 3312.379 kb on - strand at 3312.400 kb on - strand at 3312.450 kb on - strand at 3312.624 kb on + strand at 3312.682 kb on + strand at 3312.683 kb on + strand, within Dsui_3094 at 3312.685 kb on - strand, within Dsui_3094 at 3312.685 kb on - strand, within Dsui_3094 at 3312.705 kb on + strand, within Dsui_3094 at 3312.705 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,308,903 + Dsui_3091 0.13 -1.1 3,308,903 + Dsui_3091 0.13 -1.5 3,308,911 - +0.5 3,308,925 + Dsui_3091 0.15 -0.5 3,308,931 + Dsui_3091 0.16 +0.1 3,309,061 + Dsui_3091 0.29 -0.3 3,309,115 + Dsui_3091 0.35 -1.5 3,309,147 + Dsui_3091 0.38 +0.5 3,309,212 - -0.5 3,309,235 + Dsui_3091 0.47 -1.0 3,309,489 - +0.5 3,309,538 - Dsui_3091 0.78 -0.0 3,309,592 - Dsui_3091 0.84 +0.5 3,309,612 + Dsui_3091 0.86 +0.3 3,309,823 + +0.5 3,310,041 + +0.5 3,310,130 - Dsui_3092 0.14 +0.5 3,310,162 + Dsui_3092 0.16 -1.5 3,310,504 + Dsui_3092 0.35 -1.5 3,310,535 - Dsui_3092 0.36 -1.0 3,310,542 - Dsui_3092 0.37 -0.5 3,310,574 - Dsui_3092 0.38 -0.5 3,310,702 - -1.0 3,310,796 + Dsui_3092 0.50 -1.9 3,310,806 + Dsui_3092 0.51 -0.0 3,310,989 - Dsui_3092 0.61 -1.5 3,310,989 - Dsui_3092 0.61 -2.3 3,311,153 + Dsui_3092 0.70 +3.1 3,311,212 + -1.5 3,311,214 - Dsui_3092 0.73 +0.5 3,311,257 - Dsui_3092 0.76 +0.5 3,311,269 + Dsui_3092 0.76 -1.7 3,311,323 - Dsui_3092 0.79 -1.8 3,311,371 - Dsui_3092 0.82 -1.8 3,311,450 - Dsui_3092 0.86 -2.6 3,311,469 + Dsui_3092 0.87 -1.5 3,311,561 + +0.5 3,311,590 - -0.5 3,311,615 + +0.3 3,311,816 - +0.6 3,311,816 - -1.0 3,311,854 - +0.6 3,311,855 - +0.6 3,311,865 + +0.6 3,311,865 + -0.4 3,311,873 - +0.6 3,311,975 - -0.4 3,312,020 + -0.4 3,312,105 + Dsui_3093 0.25 -0.4 3,312,137 + Dsui_3093 0.36 -0.4 3,312,248 + +0.6 3,312,276 - -0.4 3,312,379 - +0.6 3,312,400 - -1.4 3,312,450 - -1.4 3,312,624 + +0.6 3,312,682 + -0.4 3,312,683 + Dsui_3094 0.32 -1.0 3,312,685 - Dsui_3094 0.32 +0.6 3,312,685 - Dsui_3094 0.32 -2.0 3,312,705 + Dsui_3094 0.35 +0.6 3,312,705 + +0.6
Or see this region's nucleotide sequence