Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2881 and Dsui_2882 are separated by 10 nucleotides Dsui_2882 and Dsui_2883 overlap by 1 nucleotides Dsui_2883 and Dsui_2884 are separated by 166 nucleotides
Dsui_2881: Dsui_2881 - 8-amino-7-oxononanoate synthase, at 3,077,077 to 3,078,252
_2881
Dsui_2882: Dsui_2882 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 3,078,263 to 3,079,015
_2882
Dsui_2883: Dsui_2883 - biotin biosynthesis protein BioC, at 3,079,015 to 3,079,788
_2883
Dsui_2884: Dsui_2884 - dethiobiotin synthase, at 3,079,955 to 3,080,608
_2884
Position (kb)
3078
3079
3080 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3077.724 kb on - strand, within Dsui_2881 at 3077.838 kb on - strand, within Dsui_2881 at 3077.869 kb on - strand, within Dsui_2881 at 3077.915 kb on + strand, within Dsui_2881 at 3078.077 kb on + strand, within Dsui_2881 at 3078.085 kb on - strand at 3078.159 kb on - strand at 3078.199 kb on - strand at 3078.228 kb on - strand at 3078.285 kb on + strand at 3078.293 kb on - strand at 3078.298 kb on - strand at 3078.408 kb on + strand, within Dsui_2882 at 3078.505 kb on + strand, within Dsui_2882 at 3078.513 kb on - strand, within Dsui_2882 at 3078.524 kb on + strand, within Dsui_2882 at 3078.586 kb on - strand at 3078.878 kb on - strand, within Dsui_2882 at 3078.879 kb on - strand at 3078.983 kb on + strand at 3079.040 kb on + strand at 3079.069 kb on - strand at 3079.100 kb on - strand, within Dsui_2883 at 3079.224 kb on + strand at 3079.341 kb on + strand, within Dsui_2883 at 3079.354 kb on - strand at 3079.375 kb on - strand, within Dsui_2883 at 3079.439 kb on + strand, within Dsui_2883 at 3079.548 kb on - strand at 3079.601 kb on + strand, within Dsui_2883 at 3079.754 kb on - strand at 3079.770 kb on + strand at 3079.778 kb on - strand at 3079.928 kb on - strand at 3079.953 kb on + strand at 3079.961 kb on - strand at 3079.963 kb on + strand at 3080.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,077,724 - Dsui_2881 0.55 -2.9 3,077,838 - Dsui_2881 0.65 +0.7 3,077,869 - Dsui_2881 0.67 -0.9 3,077,915 + Dsui_2881 0.71 -1.5 3,078,077 + Dsui_2881 0.85 -1.9 3,078,085 - +0.7 3,078,159 - -1.3 3,078,199 - -0.9 3,078,228 - -0.3 3,078,285 + -1.9 3,078,293 - +0.7 3,078,298 - +0.7 3,078,408 + Dsui_2882 0.19 -1.6 3,078,505 + Dsui_2882 0.32 -1.7 3,078,513 - Dsui_2882 0.33 -0.3 3,078,524 + Dsui_2882 0.35 -1.4 3,078,586 - +0.7 3,078,878 - Dsui_2882 0.82 -0.3 3,078,879 - +0.7 3,078,983 + -1.2 3,079,040 + -2.3 3,079,069 - -0.9 3,079,100 - Dsui_2883 0.11 +0.7 3,079,224 + -0.3 3,079,341 + Dsui_2883 0.42 -1.7 3,079,354 - -0.3 3,079,375 - Dsui_2883 0.47 +0.7 3,079,439 + Dsui_2883 0.55 -1.2 3,079,548 - +0.7 3,079,601 + Dsui_2883 0.76 -2.1 3,079,754 - -0.9 3,079,770 + -0.2 3,079,778 - +0.7 3,079,928 - +0.7 3,079,953 + +0.0 3,079,961 - +0.7 3,079,963 + -0.2 3,080,005 - +0.7
Or see this region's nucleotide sequence