Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2671 and Dsui_2672 are separated by 211 nucleotides Dsui_2672 and Dsui_2673 are separated by 50 nucleotides Dsui_2673 and Dsui_2674 overlap by 8 nucleotides Dsui_2674 and Dsui_2675 are separated by 60 nucleotides
Dsui_2671: Dsui_2671 - inosine-5''-monophosphate dehydrogenase, at 2,824,074 to 2,825,534
_2671
Dsui_2672: Dsui_2672 - hypothetical protein, at 2,825,746 to 2,826,096
_2672
Dsui_2673: Dsui_2673 - hypothetical protein, at 2,826,147 to 2,826,470
_2673
Dsui_2674: Dsui_2674 - oligoketide cyclase/lipid transport protein, at 2,826,463 to 2,826,894
_2674
Dsui_2675: Dsui_2675 - SsrA-binding protein, at 2,826,955 to 2,827,401
_2675
Position (kb)
2825
2826
2827 Strain fitness (log2 ratio)
-2
-1
0
1 at 2825.570 kb on + strand at 2825.575 kb on + strand at 2825.583 kb on - strand at 2825.583 kb on - strand at 2825.652 kb on - strand at 2825.676 kb on - strand at 2825.735 kb on + strand at 2825.758 kb on + strand at 2825.761 kb on + strand at 2825.764 kb on - strand at 2825.771 kb on + strand at 2825.803 kb on + strand, within Dsui_2672 at 2825.806 kb on + strand, within Dsui_2672 at 2825.815 kb on + strand, within Dsui_2672 at 2825.823 kb on - strand, within Dsui_2672 at 2825.830 kb on + strand, within Dsui_2672 at 2825.830 kb on + strand, within Dsui_2672 at 2825.837 kb on + strand, within Dsui_2672 at 2825.894 kb on - strand, within Dsui_2672 at 2825.937 kb on + strand, within Dsui_2672 at 2825.969 kb on + strand, within Dsui_2672 at 2826.065 kb on - strand at 2826.091 kb on + strand at 2826.096 kb on - strand at 2826.102 kb on + strand at 2826.115 kb on - strand at 2826.115 kb on - strand at 2826.115 kb on - strand at 2826.115 kb on - strand at 2826.130 kb on + strand at 2826.139 kb on - strand at 2826.228 kb on - strand, within Dsui_2673 at 2826.294 kb on - strand, within Dsui_2673 at 2826.365 kb on - strand, within Dsui_2673 at 2826.409 kb on - strand, within Dsui_2673 at 2826.897 kb on - strand at 2826.897 kb on - strand at 2826.980 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,825,570 + +0.2 2,825,575 + -1.3 2,825,583 - -0.3 2,825,583 - -0.3 2,825,652 - -0.3 2,825,676 - +0.7 2,825,735 + -0.2 2,825,758 + -0.1 2,825,761 + -0.7 2,825,764 - -0.9 2,825,771 + -0.3 2,825,803 + Dsui_2672 0.16 +0.1 2,825,806 + Dsui_2672 0.17 -0.2 2,825,815 + Dsui_2672 0.20 -0.8 2,825,823 - Dsui_2672 0.22 -0.9 2,825,830 + Dsui_2672 0.24 -0.1 2,825,830 + Dsui_2672 0.24 -0.4 2,825,837 + Dsui_2672 0.26 +0.2 2,825,894 - Dsui_2672 0.42 -1.9 2,825,937 + Dsui_2672 0.54 +0.1 2,825,969 + Dsui_2672 0.64 +0.1 2,826,065 - +0.7 2,826,091 + -0.3 2,826,096 - -0.3 2,826,102 + -0.1 2,826,115 - -1.9 2,826,115 - -2.2 2,826,115 - +0.7 2,826,115 - -1.9 2,826,130 + -0.9 2,826,139 - -0.1 2,826,228 - Dsui_2673 0.25 -0.7 2,826,294 - Dsui_2673 0.45 +1.2 2,826,365 - Dsui_2673 0.67 -0.9 2,826,409 - Dsui_2673 0.81 -0.1 2,826,897 - +0.2 2,826,897 - -0.0 2,826,980 - +0.7
Or see this region's nucleotide sequence