Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2510 and Dsui_2511 are separated by 10 nucleotides Dsui_2511 and Dsui_2512 overlap by 17 nucleotides
Dsui_2510: Dsui_2510 - anaerobic dehydrogenase, typically selenocysteine-containing, at 2,657,235 to 2,660,321
_2510
Dsui_2511: Dsui_2511 - response regulator, at 2,660,332 to 2,660,964
_2511
Dsui_2512: Dsui_2512 - histidine kinase, at 2,660,948 to 2,662,669
_2512
Position (kb)
2660
2661 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2659.385 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.426 kb on - strand, within Dsui_2510 at 2659.441 kb on + strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.497 kb on + strand, within Dsui_2510 at 2659.567 kb on + strand, within Dsui_2510 at 2659.609 kb on - strand, within Dsui_2510 at 2659.630 kb on + strand, within Dsui_2510 at 2659.802 kb on + strand, within Dsui_2510 at 2659.825 kb on + strand, within Dsui_2510 at 2659.843 kb on - strand, within Dsui_2510 at 2659.903 kb on + strand, within Dsui_2510 at 2659.961 kb on + strand, within Dsui_2510 at 2660.047 kb on - strand at 2660.086 kb on + strand at 2660.169 kb on + strand at 2660.183 kb on - strand at 2660.200 kb on + strand at 2660.233 kb on - strand at 2660.243 kb on + strand at 2660.335 kb on + strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.457 kb on - strand, within Dsui_2511 at 2660.477 kb on + strand, within Dsui_2511 at 2660.490 kb on - strand, within Dsui_2511 at 2660.585 kb on + strand, within Dsui_2511 at 2660.715 kb on + strand, within Dsui_2511 at 2660.730 kb on + strand, within Dsui_2511 at 2660.749 kb on - strand, within Dsui_2511 at 2660.765 kb on - strand, within Dsui_2511 at 2660.770 kb on + strand, within Dsui_2511 at 2660.860 kb on - strand, within Dsui_2511 at 2660.924 kb on + strand at 2660.952 kb on - strand at 2660.981 kb on + strand at 2661.062 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.075 kb on - strand at 2661.148 kb on - strand, within Dsui_2512 at 2661.293 kb on + strand, within Dsui_2512 at 2661.301 kb on - strand, within Dsui_2512 at 2661.390 kb on + strand, within Dsui_2512 at 2661.400 kb on + strand, within Dsui_2512 at 2661.408 kb on - strand, within Dsui_2512 at 2661.579 kb on + strand, within Dsui_2512 at 2661.666 kb on - strand, within Dsui_2512 at 2661.718 kb on + strand, within Dsui_2512 at 2661.718 kb on + strand, within Dsui_2512 at 2661.718 kb on + strand at 2661.733 kb on + strand, within Dsui_2512 at 2661.802 kb on - strand, within Dsui_2512 at 2661.863 kb on - strand, within Dsui_2512 at 2661.886 kb on + strand, within Dsui_2512 at 2661.913 kb on + strand, within Dsui_2512 at 2661.918 kb on + strand, within Dsui_2512
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,659,385 + Dsui_2510 0.70 -0.5 2,659,418 + Dsui_2510 0.71 -2.0 2,659,418 + Dsui_2510 0.71 -0.5 2,659,426 - Dsui_2510 0.71 -0.5 2,659,441 + Dsui_2510 0.71 -1.5 2,659,481 - Dsui_2510 0.73 +0.5 2,659,481 - Dsui_2510 0.73 -0.5 2,659,497 + Dsui_2510 0.73 -1.8 2,659,567 + Dsui_2510 0.76 +0.5 2,659,609 - Dsui_2510 0.77 -0.5 2,659,630 + Dsui_2510 0.78 +0.5 2,659,802 + Dsui_2510 0.83 +0.5 2,659,825 + Dsui_2510 0.84 -1.0 2,659,843 - Dsui_2510 0.84 -0.5 2,659,903 + Dsui_2510 0.86 -1.0 2,659,961 + Dsui_2510 0.88 -1.0 2,660,047 - -1.0 2,660,086 + -1.0 2,660,169 + +0.5 2,660,183 - -1.0 2,660,200 + -0.5 2,660,233 - -0.5 2,660,243 + +0.5 2,660,335 + -1.5 2,660,343 - -0.1 2,660,343 - -0.4 2,660,343 - -0.5 2,660,457 - Dsui_2511 0.20 -0.9 2,660,477 + Dsui_2511 0.23 +0.5 2,660,490 - Dsui_2511 0.25 +2.1 2,660,585 + Dsui_2511 0.40 +0.5 2,660,715 + Dsui_2511 0.61 +0.5 2,660,730 + Dsui_2511 0.63 +0.5 2,660,749 - Dsui_2511 0.66 +0.2 2,660,765 - Dsui_2511 0.68 -0.4 2,660,770 + Dsui_2511 0.69 -1.0 2,660,860 - Dsui_2511 0.83 -1.3 2,660,924 + -2.5 2,660,952 - -0.3 2,660,981 + -0.5 2,661,062 + -0.5 2,661,073 + -0.5 2,661,073 + +0.5 2,661,073 + -1.0 2,661,073 + +0.5 2,661,075 - -2.9 2,661,148 - Dsui_2512 0.12 +0.5 2,661,293 + Dsui_2512 0.20 +0.5 2,661,301 - Dsui_2512 0.20 -1.0 2,661,390 + Dsui_2512 0.26 -0.5 2,661,400 + Dsui_2512 0.26 +0.5 2,661,408 - Dsui_2512 0.27 +0.5 2,661,579 + Dsui_2512 0.37 +0.5 2,661,666 - Dsui_2512 0.42 +0.5 2,661,718 + Dsui_2512 0.45 -0.5 2,661,718 + Dsui_2512 0.45 +0.5 2,661,718 + +0.5 2,661,733 + Dsui_2512 0.46 +0.5 2,661,802 - Dsui_2512 0.50 -0.5 2,661,863 - Dsui_2512 0.53 -0.5 2,661,886 + Dsui_2512 0.54 +0.5 2,661,913 + Dsui_2512 0.56 +0.5 2,661,918 + Dsui_2512 0.56 -0.5
Or see this region's nucleotide sequence