Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2238 and Dsui_2239 are separated by 459 nucleotides Dsui_2239 and Dsui_2240 are separated by 161 nucleotides
Dsui_2238: Dsui_2238 - ABC-type dipeptide transport system, periplasmic component, at 2,381,177 to 2,382,739
_2238
Dsui_2239: Dsui_2239 - tRNA (uracil-5-)-methyltransferase, at 2,383,199 to 2,384,287
_2239
Dsui_2240: Dsui_2240 - PAS domain S-box, at 2,384,449 to 2,388,288
_2240
Position (kb)
2383
2384
2385 Strain fitness (log2 ratio)
-1
0
1 at 2382.327 kb on + strand, within Dsui_2238 at 2382.382 kb on + strand at 2382.412 kb on + strand, within Dsui_2238 at 2382.527 kb on - strand at 2382.531 kb on - strand, within Dsui_2238 at 2382.562 kb on + strand at 2382.782 kb on - strand at 2382.936 kb on + strand at 2383.038 kb on - strand at 2383.038 kb on - strand at 2383.038 kb on - strand at 2383.157 kb on - strand at 2383.221 kb on - strand at 2383.350 kb on - strand, within Dsui_2239 at 2383.356 kb on - strand, within Dsui_2239 at 2383.373 kb on - strand, within Dsui_2239 at 2383.475 kb on + strand at 2383.483 kb on - strand, within Dsui_2239 at 2383.483 kb on - strand, within Dsui_2239 at 2383.483 kb on - strand, within Dsui_2239 at 2383.515 kb on + strand at 2383.523 kb on - strand, within Dsui_2239 at 2383.788 kb on - strand, within Dsui_2239 at 2383.801 kb on + strand at 2383.977 kb on + strand at 2384.133 kb on + strand at 2384.365 kb on + strand at 2384.447 kb on + strand at 2384.525 kb on + strand at 2384.532 kb on - strand at 2384.533 kb on - strand at 2384.561 kb on + strand at 2384.637 kb on - strand at 2384.701 kb on + strand at 2384.775 kb on + strand at 2385.067 kb on - strand at 2385.240 kb on - strand at 2385.263 kb on + strand at 2385.277 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,382,327 + Dsui_2238 0.74 -1.3 2,382,382 + +0.7 2,382,412 + Dsui_2238 0.79 -1.3 2,382,527 - +0.7 2,382,531 - Dsui_2238 0.87 -0.9 2,382,562 + +0.7 2,382,782 - +0.7 2,382,936 + +0.7 2,383,038 - -0.0 2,383,038 - -1.6 2,383,038 - +0.7 2,383,157 - -0.1 2,383,221 - -0.3 2,383,350 - Dsui_2239 0.14 -0.5 2,383,356 - Dsui_2239 0.14 +0.3 2,383,373 - Dsui_2239 0.16 -0.4 2,383,475 + -1.3 2,383,483 - Dsui_2239 0.26 +0.4 2,383,483 - Dsui_2239 0.26 +0.1 2,383,483 - Dsui_2239 0.26 -0.9 2,383,515 + +0.7 2,383,523 - Dsui_2239 0.30 -0.7 2,383,788 - Dsui_2239 0.54 -0.3 2,383,801 + -0.9 2,383,977 + +0.7 2,384,133 + -1.3 2,384,365 + -0.9 2,384,447 + -0.3 2,384,525 + +0.7 2,384,532 - -1.3 2,384,533 - -0.9 2,384,561 + -0.3 2,384,637 - -0.9 2,384,701 + +0.7 2,384,775 + +0.7 2,385,067 - -0.9 2,385,240 - -0.3 2,385,263 + -0.9 2,385,277 + +0.7
Or see this region's nucleotide sequence