Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1700 and Dsui_1701 are separated by 82 nucleotides Dsui_1701 and Dsui_1702 are separated by 204 nucleotides Dsui_1702 and Dsui_1703 are separated by 14 nucleotides Dsui_1703 and Dsui_1704 are separated by 275 nucleotides
Dsui_1700: Dsui_1700 - putative membrane protein, at 1,787,684 to 1,788,394
_1700
Dsui_1701: Dsui_1701 - restriction endonuclease, at 1,788,477 to 1,789,109
_1701
Dsui_1702: Dsui_1702 - TonB family protein, at 1,789,314 to 1,790,039
_1702
Dsui_1703: Dsui_1703 - ADP-ribose pyrophosphatase, at 1,790,054 to 1,790,602
_1703
Dsui_1704: Dsui_1704 - flagellar motor stator protein MotA, at 1,790,878 to 1,791,735
_1704
Position (kb)
1789
1790
1791 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1788.348 kb on - strand at 1788.372 kb on - strand at 1788.382 kb on - strand at 1788.449 kb on + strand at 1788.482 kb on - strand at 1788.539 kb on - strand at 1788.540 kb on - strand at 1788.544 kb on - strand, within Dsui_1701 at 1788.599 kb on + strand, within Dsui_1701 at 1788.602 kb on - strand, within Dsui_1701 at 1788.717 kb on - strand, within Dsui_1701 at 1788.816 kb on + strand, within Dsui_1701 at 1788.828 kb on + strand at 1788.914 kb on + strand, within Dsui_1701 at 1788.935 kb on + strand, within Dsui_1701 at 1789.026 kb on + strand, within Dsui_1701 at 1789.034 kb on - strand, within Dsui_1701 at 1789.034 kb on - strand, within Dsui_1701 at 1789.034 kb on - strand, within Dsui_1701 at 1789.210 kb on + strand at 1789.310 kb on + strand at 1789.366 kb on + strand at 1789.385 kb on - strand at 1789.488 kb on + strand at 1789.714 kb on - strand, within Dsui_1702 at 1789.747 kb on + strand, within Dsui_1702 at 1789.834 kb on + strand, within Dsui_1702 at 1789.885 kb on - strand, within Dsui_1702 at 1789.973 kb on + strand at 1790.028 kb on - strand at 1790.083 kb on + strand at 1790.083 kb on + strand at 1790.083 kb on + strand at 1790.091 kb on - strand at 1790.091 kb on - strand at 1790.091 kb on - strand at 1790.093 kb on + strand at 1790.102 kb on + strand at 1790.106 kb on - strand at 1790.175 kb on - strand, within Dsui_1703 at 1790.221 kb on + strand, within Dsui_1703 at 1790.264 kb on + strand, within Dsui_1703 at 1790.282 kb on - strand, within Dsui_1703 at 1790.283 kb on - strand, within Dsui_1703 at 1790.341 kb on - strand, within Dsui_1703 at 1790.346 kb on - strand, within Dsui_1703 at 1790.433 kb on - strand, within Dsui_1703 at 1790.449 kb on - strand, within Dsui_1703 at 1790.493 kb on + strand, within Dsui_1703 at 1790.507 kb on - strand, within Dsui_1703 at 1790.592 kb on + strand at 1790.595 kb on - strand at 1790.610 kb on + strand at 1790.610 kb on + strand at 1790.613 kb on + strand at 1790.616 kb on - strand at 1790.618 kb on - strand at 1790.679 kb on - strand at 1790.683 kb on + strand at 1790.685 kb on + strand at 1790.692 kb on - strand at 1790.778 kb on - strand at 1790.801 kb on + strand at 1790.854 kb on + strand at 1790.861 kb on + strand at 1790.863 kb on + strand at 1791.023 kb on + strand, within Dsui_1704
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,788,348 - +0.6 1,788,372 - +0.4 1,788,382 - -0.0 1,788,449 + +0.4 1,788,482 - +0.4 1,788,539 - +0.4 1,788,540 - -1.6 1,788,544 - Dsui_1701 0.11 -1.6 1,788,599 + Dsui_1701 0.19 -0.6 1,788,602 - Dsui_1701 0.20 -0.6 1,788,717 - Dsui_1701 0.38 +0.4 1,788,816 + Dsui_1701 0.54 -3.2 1,788,828 + +0.4 1,788,914 + Dsui_1701 0.69 -1.9 1,788,935 + Dsui_1701 0.72 -2.6 1,789,026 + Dsui_1701 0.87 -1.2 1,789,034 - Dsui_1701 0.88 +0.4 1,789,034 - Dsui_1701 0.88 -1.2 1,789,034 - Dsui_1701 0.88 +0.4 1,789,210 + +0.4 1,789,310 + +0.4 1,789,366 + +0.4 1,789,385 - +0.4 1,789,488 + +0.4 1,789,714 - Dsui_1702 0.55 -2.7 1,789,747 + Dsui_1702 0.60 +0.4 1,789,834 + Dsui_1702 0.72 +0.4 1,789,885 - Dsui_1702 0.79 +0.4 1,789,973 + +0.4 1,790,028 - -0.6 1,790,083 + -0.6 1,790,083 + -0.6 1,790,083 + +0.4 1,790,091 - -0.7 1,790,091 - +0.0 1,790,091 - +0.2 1,790,093 + -0.3 1,790,102 + -1.6 1,790,106 - +0.1 1,790,175 - Dsui_1703 0.22 -0.0 1,790,221 + Dsui_1703 0.30 -2.6 1,790,264 + Dsui_1703 0.38 +0.4 1,790,282 - Dsui_1703 0.42 +0.6 1,790,283 - Dsui_1703 0.42 +0.4 1,790,341 - Dsui_1703 0.52 -0.3 1,790,346 - Dsui_1703 0.53 -0.0 1,790,433 - Dsui_1703 0.69 -0.9 1,790,449 - Dsui_1703 0.72 -0.2 1,790,493 + Dsui_1703 0.80 -1.9 1,790,507 - Dsui_1703 0.83 -0.0 1,790,592 + +0.4 1,790,595 - +0.3 1,790,610 + -2.4 1,790,610 + +0.4 1,790,613 + -0.6 1,790,616 - -1.2 1,790,618 - +0.2 1,790,679 - -0.6 1,790,683 + +0.4 1,790,685 + -1.6 1,790,692 - -0.6 1,790,778 - -0.6 1,790,801 + -0.2 1,790,854 + -0.0 1,790,861 + -0.1 1,790,863 + -0.2 1,791,023 + Dsui_1704 0.17 +0.0
Or see this region's nucleotide sequence