Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1459 and Dsui_1460 are separated by 140 nucleotides Dsui_1460 and Dsui_1461 are separated by 219 nucleotides
Dsui_1459: Dsui_1459 - hypothetical protein, at 1,517,853 to 1,519,376
_1459
Dsui_1460: Dsui_1460 - cAMP-binding protein, at 1,519,517 to 1,520,209
_1460
Dsui_1461: Dsui_1461 - RND family efflux transporter, MFP subunit, at 1,520,429 to 1,521,598
_1461
Position (kb)
1519
1520
1521 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1518.560 kb on - strand, within Dsui_1459 at 1518.651 kb on + strand, within Dsui_1459 at 1518.689 kb on - strand, within Dsui_1459 at 1518.769 kb on + strand, within Dsui_1459 at 1518.777 kb on - strand, within Dsui_1459 at 1518.833 kb on + strand, within Dsui_1459 at 1518.953 kb on + strand, within Dsui_1459 at 1518.954 kb on + strand at 1519.019 kb on - strand, within Dsui_1459 at 1519.119 kb on - strand, within Dsui_1459 at 1519.219 kb on + strand, within Dsui_1459 at 1519.227 kb on - strand at 1519.238 kb on + strand at 1519.244 kb on + strand at 1519.375 kb on + strand at 1519.515 kb on + strand at 1519.530 kb on - strand at 1519.636 kb on + strand, within Dsui_1460 at 1519.679 kb on - strand, within Dsui_1460 at 1519.764 kb on + strand at 1519.770 kb on - strand, within Dsui_1460 at 1519.770 kb on - strand, within Dsui_1460 at 1519.800 kb on - strand, within Dsui_1460 at 1519.869 kb on + strand, within Dsui_1460 at 1519.888 kb on - strand, within Dsui_1460 at 1519.903 kb on + strand, within Dsui_1460 at 1519.907 kb on - strand, within Dsui_1460 at 1519.920 kb on + strand, within Dsui_1460 at 1519.926 kb on + strand at 1519.928 kb on - strand, within Dsui_1460 at 1519.940 kb on + strand at 1519.948 kb on - strand, within Dsui_1460 at 1519.948 kb on - strand, within Dsui_1460 at 1519.959 kb on + strand, within Dsui_1460 at 1519.963 kb on + strand at 1519.966 kb on - strand, within Dsui_1460 at 1519.966 kb on - strand, within Dsui_1460 at 1519.966 kb on - strand, within Dsui_1460 at 1519.967 kb on - strand, within Dsui_1460 at 1519.997 kb on + strand, within Dsui_1460 at 1520.005 kb on - strand, within Dsui_1460 at 1520.027 kb on - strand, within Dsui_1460 at 1520.044 kb on + strand, within Dsui_1460 at 1520.252 kb on + strand at 1520.258 kb on - strand at 1520.258 kb on - strand at 1520.273 kb on + strand at 1520.363 kb on - strand at 1520.426 kb on + strand at 1520.439 kb on - strand at 1520.439 kb on - strand at 1520.622 kb on + strand, within Dsui_1461 at 1520.627 kb on + strand, within Dsui_1461 at 1520.628 kb on - strand, within Dsui_1461 at 1520.630 kb on - strand, within Dsui_1461 at 1520.635 kb on - strand at 1520.714 kb on - strand at 1520.779 kb on + strand, within Dsui_1461 at 1520.787 kb on - strand, within Dsui_1461 at 1520.851 kb on + strand, within Dsui_1461 at 1520.951 kb on + strand, within Dsui_1461 at 1520.995 kb on - strand, within Dsui_1461 at 1521.016 kb on - strand, within Dsui_1461 at 1521.036 kb on - strand at 1521.128 kb on - strand, within Dsui_1461 at 1521.145 kb on - strand, within Dsui_1461 at 1521.147 kb on + strand, within Dsui_1461 at 1521.163 kb on + strand, within Dsui_1461 at 1521.170 kb on - strand, within Dsui_1461
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,518,560 - Dsui_1459 0.46 -0.2 1,518,651 + Dsui_1459 0.52 -1.1 1,518,689 - Dsui_1459 0.55 -0.6 1,518,769 + Dsui_1459 0.60 +0.5 1,518,777 - Dsui_1459 0.61 -0.9 1,518,833 + Dsui_1459 0.64 +0.5 1,518,953 + Dsui_1459 0.72 +0.5 1,518,954 + +0.5 1,519,019 - Dsui_1459 0.77 -0.8 1,519,119 - Dsui_1459 0.83 -1.1 1,519,219 + Dsui_1459 0.90 +0.5 1,519,227 - -0.4 1,519,238 + -3.3 1,519,244 + -1.1 1,519,375 + -1.5 1,519,515 + -1.5 1,519,530 - -0.2 1,519,636 + Dsui_1460 0.17 -1.5 1,519,679 - Dsui_1460 0.23 +0.2 1,519,764 + +0.5 1,519,770 - Dsui_1460 0.37 +0.2 1,519,770 - Dsui_1460 0.37 +0.4 1,519,800 - Dsui_1460 0.41 +0.3 1,519,869 + Dsui_1460 0.51 +0.5 1,519,888 - Dsui_1460 0.54 +0.3 1,519,903 + Dsui_1460 0.56 -2.1 1,519,907 - Dsui_1460 0.56 +0.2 1,519,920 + Dsui_1460 0.58 -0.5 1,519,926 + +0.5 1,519,928 - Dsui_1460 0.59 +0.3 1,519,940 + +0.5 1,519,948 - Dsui_1460 0.62 -0.0 1,519,948 - Dsui_1460 0.62 +0.6 1,519,959 + Dsui_1460 0.64 +0.5 1,519,963 + -0.5 1,519,966 - Dsui_1460 0.65 -0.1 1,519,966 - Dsui_1460 0.65 +0.2 1,519,966 - Dsui_1460 0.65 +0.3 1,519,967 - Dsui_1460 0.65 +0.2 1,519,997 + Dsui_1460 0.69 -0.5 1,520,005 - Dsui_1460 0.70 +0.3 1,520,027 - Dsui_1460 0.74 +0.3 1,520,044 + Dsui_1460 0.76 -2.1 1,520,252 + -0.5 1,520,258 - +0.5 1,520,258 - +0.5 1,520,273 + -0.5 1,520,363 - -0.5 1,520,426 + +0.0 1,520,439 - +0.5 1,520,439 - -0.5 1,520,622 + Dsui_1461 0.16 -0.5 1,520,627 + Dsui_1461 0.17 -0.0 1,520,628 - Dsui_1461 0.17 -0.5 1,520,630 - Dsui_1461 0.17 -1.1 1,520,635 - +0.5 1,520,714 - +0.5 1,520,779 + Dsui_1461 0.30 -0.9 1,520,787 - Dsui_1461 0.31 -3.5 1,520,851 + Dsui_1461 0.36 +0.4 1,520,951 + Dsui_1461 0.45 -0.5 1,520,995 - Dsui_1461 0.48 -1.8 1,521,016 - Dsui_1461 0.50 -1.5 1,521,036 - -0.5 1,521,128 - Dsui_1461 0.60 -1.1 1,521,145 - Dsui_1461 0.61 -1.5 1,521,147 + Dsui_1461 0.61 +0.4 1,521,163 + Dsui_1461 0.63 -0.6 1,521,170 - Dsui_1461 0.63 +0.5
Or see this region's nucleotide sequence