Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0610 and Dsui_0611 are separated by 59 nucleotides Dsui_0611 and Dsui_0612 are separated by 315 nucleotides Dsui_0612 and Dsui_0613 are separated by 242 nucleotides
Dsui_0610: Dsui_0610 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 604,844 to 606,016
_0610
Dsui_0611: Dsui_0611 - phosphotransferase system cellobiose-specific component IIC, at 606,076 to 608,163
_0611
Dsui_0612: Dsui_0612 - hypothetical protein, at 608,479 to 608,775
_0612
Dsui_0613: Dsui_0613 - uncharacterized protein SCO1/SenC/PrrC, at 609,018 to 609,569
_0613
Position (kb) 606
607
608
609 Strain fitness (log2 ratio) -2
-1
0
1 at 605.147 kb on + strand, within Dsui_0610 at 605.155 kb on - strand, within Dsui_0610 at 605.186 kb on + strand, within Dsui_0610 at 605.194 kb on - strand, within Dsui_0610 at 605.220 kb on + strand, within Dsui_0610 at 605.228 kb on - strand, within Dsui_0610 at 605.235 kb on + strand, within Dsui_0610 at 605.243 kb on - strand, within Dsui_0610 at 605.415 kb on + strand, within Dsui_0610 at 605.427 kb on + strand, within Dsui_0610 at 605.650 kb on + strand, within Dsui_0610 at 605.691 kb on - strand, within Dsui_0610 at 605.771 kb on - strand, within Dsui_0610 at 605.778 kb on + strand, within Dsui_0610 at 605.786 kb on - strand, within Dsui_0610 at 605.796 kb on + strand, within Dsui_0610 at 605.916 kb on + strand at 605.987 kb on + strand at 606.036 kb on + strand at 606.041 kb on + strand at 606.193 kb on - strand at 606.198 kb on - strand at 606.199 kb on - strand at 606.256 kb on + strand at 606.301 kb on + strand, within Dsui_0611 at 606.510 kb on + strand, within Dsui_0611 at 606.532 kb on - strand, within Dsui_0611 at 606.590 kb on - strand at 606.597 kb on - strand, within Dsui_0611 at 606.637 kb on + strand, within Dsui_0611 at 606.671 kb on - strand, within Dsui_0611 at 606.790 kb on - strand, within Dsui_0611 at 606.869 kb on - strand, within Dsui_0611 at 607.091 kb on + strand, within Dsui_0611 at 607.301 kb on - strand, within Dsui_0611 at 607.452 kb on + strand at 607.456 kb on - strand, within Dsui_0611 at 607.535 kb on - strand, within Dsui_0611 at 607.573 kb on + strand, within Dsui_0611 at 607.708 kb on - strand, within Dsui_0611 at 607.743 kb on - strand, within Dsui_0611 at 607.782 kb on + strand, within Dsui_0611 at 607.845 kb on + strand, within Dsui_0611 at 607.956 kb on - strand at 608.028 kb on + strand at 608.043 kb on + strand at 608.082 kb on + strand at 608.090 kb on - strand at 608.175 kb on - strand at 608.213 kb on + strand at 608.213 kb on + strand at 608.221 kb on - strand at 608.334 kb on + strand at 608.460 kb on + strand at 608.478 kb on - strand at 608.478 kb on - strand at 608.976 kb on + strand at 609.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 605,147 + Dsui_0610 0.26 -0.2 605,155 - Dsui_0610 0.27 -0.5 605,186 + Dsui_0610 0.29 -0.1 605,194 - Dsui_0610 0.30 -2.3 605,220 + Dsui_0610 0.32 -0.1 605,228 - Dsui_0610 0.33 -2.3 605,235 + Dsui_0610 0.33 +0.1 605,243 - Dsui_0610 0.34 +0.5 605,415 + Dsui_0610 0.49 +0.2 605,427 + Dsui_0610 0.50 +0.1 605,650 + Dsui_0610 0.69 -0.1 605,691 - Dsui_0610 0.72 +0.5 605,771 - Dsui_0610 0.79 -0.5 605,778 + Dsui_0610 0.80 -0.1 605,786 - Dsui_0610 0.80 -1.0 605,796 + Dsui_0610 0.81 +0.1 605,916 + -0.6 605,987 + +0.1 606,036 + +0.3 606,041 + -0.4 606,193 - +0.8 606,198 - -0.0 606,199 - -0.8 606,256 + -0.8 606,301 + Dsui_0611 0.11 +0.5 606,510 + Dsui_0611 0.21 -0.5 606,532 - Dsui_0611 0.22 +0.5 606,590 - +0.5 606,597 - Dsui_0611 0.25 -0.5 606,637 + Dsui_0611 0.27 -1.0 606,671 - Dsui_0611 0.28 -1.5 606,790 - Dsui_0611 0.34 +0.5 606,869 - Dsui_0611 0.38 +0.5 607,091 + Dsui_0611 0.49 +0.5 607,301 - Dsui_0611 0.59 -1.5 607,452 + +0.5 607,456 - Dsui_0611 0.66 -1.0 607,535 - Dsui_0611 0.70 -1.0 607,573 + Dsui_0611 0.72 -1.5 607,708 - Dsui_0611 0.78 -0.5 607,743 - Dsui_0611 0.80 -1.0 607,782 + Dsui_0611 0.82 -1.5 607,845 + Dsui_0611 0.85 -0.5 607,956 - -1.0 608,028 + -1.8 608,043 + -1.0 608,082 + -1.5 608,090 - -1.0 608,175 - -2.5 608,213 + +0.5 608,213 + -0.5 608,221 - -1.8 608,334 + -1.0 608,460 + -2.0 608,478 - +0.5 608,478 - -2.6 608,976 + -0.2 609,066 - +0.5
Or see this region's nucleotide sequence