Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03694

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
3,859,041	-				-0.2
3,859,050	+				-0.6
3,859,082	-				+0.3
3,859,086	-				-0.1
3,859,086	-				+0.2
3,859,103	-				+0.4
3,859,118	+				-0.8
3,859,164	+		CCNA_03693	0.11	-2.6
3,859,169	+		CCNA_03693	0.12	+1.4
3,859,174	+		CCNA_03693	0.12	-0.9
3,859,182	-		CCNA_03693	0.13	+0.4
3,859,185	+		CCNA_03693	0.14	-2.0
3,859,194	-		CCNA_03693	0.15	+1.1
3,859,233	-		CCNA_03693	0.20	-0.3
3,859,248	-		CCNA_03693	0.22	+0.1
3,859,308	-		CCNA_03693	0.30	-0.1
3,859,322	-		CCNA_03693	0.32	+0.1
3,859,387	+		CCNA_03693	0.40	-1.8
3,859,395	-		CCNA_03693	0.42	-0.9
3,859,400	-		CCNA_03693	0.42	-0.3
3,859,418	-		CCNA_03693	0.45	+0.1
3,859,418	-		CCNA_03693	0.45	+0.2
3,859,454	+		CCNA_03693	0.49	+1.6
3,859,454	+		CCNA_03693	0.49	+0.5
3,859,454	+		CCNA_03693	0.49	-0.3
3,859,454	+		CCNA_03693	0.49	+0.0
3,859,457	-		CCNA_03693	0.50	-0.7
3,859,462	-		CCNA_03693	0.50	-1.5
3,859,462	-		CCNA_03693	0.50	+0.0
3,859,493	+		CCNA_03693	0.54	+2.1
3,859,497	+		CCNA_03693	0.55	-0.1
3,859,524	+		CCNA_03693	0.59	-1.3
3,859,524	+		CCNA_03693	0.59	-1.1
3,859,524	+		CCNA_03693	0.59	+1.2
3,859,524	+		CCNA_03693	0.59	+0.1
3,859,532	-		CCNA_03693	0.60	+0.0
3,859,558	+		CCNA_03693	0.63	-1.6
3,859,578	+		CCNA_03693	0.66	-2.5
3,859,579	+		CCNA_03693	0.66	-0.3
3,859,586	-		CCNA_03693	0.67	-2.7
3,859,611	+		CCNA_03693	0.70	+0.9
3,859,621	+		CCNA_03693	0.71	-0.9
3,859,630	-		CCNA_03693	0.73	+0.4
3,859,663	-		CCNA_03693	0.77	-0.6
3,859,701	+		CCNA_03693	0.82	-2.6
3,859,721	+		CCNA_03693	0.85	-3.0
3,859,729	-		CCNA_03693	0.86	-1.8
3,859,729	-		CCNA_03693	0.86	-1.4
3,859,729	-		CCNA_03693	0.86	+0.1
3,859,729	-		CCNA_03693	0.86	-1.6
3,859,778	-				+0.2
3,859,787	+				-0.9
3,859,832	-				-0.3
3,859,866	-				-0.6
3,859,866	-				-0.4
3,859,866	-				-1.1
3,859,866	-				-0.7
3,859,872	+				-0.3
3,859,880	-				-0.9
3,859,894	+				-0.1
3,859,951	-				-0.8
3,859,971	-				-1.7
3,859,973	+				+1.4
3,859,999	-				+0.6
3,860,006	-				-0.7
3,860,050	-				-0.5
3,860,071	+				+1.1
3,860,075	-				+0.7
3,860,079	-				+0.9
3,860,089	-				+0.1
3,860,108	-				-0.4
3,860,108	-				-1.9
3,860,118	-				+0.6
3,860,125	+				+1.2
3,860,125	+				+0.9
3,860,125	+				+0.1
3,860,125	+				+1.2
3,860,166	+		CCNA_03694	0.13	+1.3
3,860,172	+		CCNA_03694	0.14	+2.0
3,860,189	+		CCNA_03694	0.16	+0.7
3,860,197	-		CCNA_03694	0.17	+0.7
3,860,210	+		CCNA_03694	0.18	+1.1
3,860,218	-		CCNA_03694	0.19	+0.1
3,860,218	-		CCNA_03694	0.19	-0.9
3,860,218	-		CCNA_03694	0.19	+1.0
3,860,218	-		CCNA_03694	0.19	+0.9
3,860,232	+		CCNA_03694	0.20	+1.0
3,860,232	+		CCNA_03694	0.20	+1.1
3,860,250	+		CCNA_03694	0.22	+1.2
3,860,255	+		CCNA_03694	0.23	+0.8
3,860,255	+		CCNA_03694	0.23	+0.9
3,860,255	+		CCNA_03694	0.23	+1.2
3,860,255	+		CCNA_03694	0.23	+0.5
3,860,255	+		CCNA_03694	0.23	+0.7
3,860,263	-		CCNA_03694	0.24	-3.1
3,860,263	-		CCNA_03694	0.24	+1.3
3,860,263	-		CCNA_03694	0.24	+0.5
3,860,263	-		CCNA_03694	0.24	+0.5
3,860,263	-		CCNA_03694	0.24	+0.6
3,860,294	+		CCNA_03694	0.27	+0.9
3,860,308	-		CCNA_03694	0.28	+1.4
3,860,357	+		CCNA_03694	0.34	+0.3
3,860,359	-		CCNA_03694	0.34	+1.0
3,860,367	+		CCNA_03694	0.35	+1.3
3,860,367	+		CCNA_03694	0.35	+1.2
3,860,367	+		CCNA_03694	0.35	+2.7
3,860,375	-		CCNA_03694	0.35	+1.5
3,860,382	+		CCNA_03694	0.36	+0.6
3,860,382	+		CCNA_03694	0.36	+0.8
3,860,382	+		CCNA_03694	0.36	+1.2
3,860,382	+		CCNA_03694	0.36	+0.3
3,860,382	+		CCNA_03694	0.36	+0.9
3,860,385	-		CCNA_03694	0.37	-0.3
3,860,390	-		CCNA_03694	0.37	+0.5
3,860,390	-		CCNA_03694	0.37	+0.4
3,860,390	-		CCNA_03694	0.37	+1.2
3,860,390	-		CCNA_03694	0.37	+0.2
3,860,413	-		CCNA_03694	0.39	+0.2
3,860,460	+		CCNA_03694	0.44	+0.6
3,860,482	+		CCNA_03694	0.47	+1.0
3,860,482	+		CCNA_03694	0.47	+0.4
3,860,482	+		CCNA_03694	0.47	+0.3
3,860,482	+		CCNA_03694	0.47	+3.6
3,860,482	+		CCNA_03694	0.47	+0.3
3,860,482	+		CCNA_03694	0.47	+0.9
3,860,482	+		CCNA_03694	0.47	+1.3
3,860,482	+		CCNA_03694	0.47	+0.6
3,860,487	+		CCNA_03694	0.47	+1.0
3,860,487	+		CCNA_03694	0.47	+1.3
3,860,487	+		CCNA_03694	0.47	+1.1
3,860,490	-		CCNA_03694	0.48	-0.1
3,860,490	-		CCNA_03694	0.48	+1.8
3,860,490	-		CCNA_03694	0.48	+0.7
3,860,490	-		CCNA_03694	0.48	+0.9
3,860,492	+		CCNA_03694	0.48	+1.8
3,860,492	+		CCNA_03694	0.48	+1.2
3,860,492	+		CCNA_03694	0.48	+1.3
3,860,492	+		CCNA_03694	0.48	+0.9
3,860,492	+		CCNA_03694	0.48	+1.2
3,860,495	-		CCNA_03694	0.48	+1.5
3,860,500	+		CCNA_03694	0.49	+1.3
3,860,500	-		CCNA_03694	0.49	+0.3
3,860,500	-		CCNA_03694	0.49	-0.1
3,860,500	-		CCNA_03694	0.49	-0.4
3,860,500	-		CCNA_03694	0.49	+1.3
3,860,500	-		CCNA_03694	0.49	+0.8
3,860,505	-		CCNA_03694	0.49	+0.9
3,860,546	+		CCNA_03694	0.54	+1.2
3,860,550	-		CCNA_03694	0.54	+1.5
3,860,550	-				-0.9
3,860,554	-		CCNA_03694	0.54	-0.1
3,860,554	-		CCNA_03694	0.54	-0.2
3,860,568	+		CCNA_03694	0.56	+0.6
3,860,568	+		CCNA_03694	0.56	+1.0
3,860,568	+		CCNA_03694	0.56	+1.1
3,860,568	+		CCNA_03694	0.56	-0.9
3,860,568	+		CCNA_03694	0.56	+0.8
3,860,568	+		CCNA_03694	0.56	+1.3
3,860,568	+		CCNA_03694	0.56	+2.5
3,860,568	+		CCNA_03694	0.56	+0.4
3,860,568	+		CCNA_03694	0.56	+0.5
3,860,576	-		CCNA_03694	0.57	-0.0
3,860,576	-		CCNA_03694	0.57	+1.2
3,860,576	-		CCNA_03694	0.57	+0.7
3,860,576	-		CCNA_03694	0.57	-0.4
3,860,578	+		CCNA_03694	0.57	+1.9
3,860,591	+		CCNA_03694	0.58	+1.7
3,860,604	+		CCNA_03694	0.60	+1.5
3,860,614	-		CCNA_03694	0.61	+1.6
3,860,623	+		CCNA_03694	0.62	+0.8
3,860,623	+		CCNA_03694	0.62	-0.4
3,860,623	+		CCNA_03694	0.62	+1.2
3,860,623	+		CCNA_03694	0.62	+2.1
3,860,625	+		CCNA_03694	0.62	+0.6
3,860,631	-		CCNA_03694	0.63	+1.3
3,860,631	-		CCNA_03694	0.63	-1.2
3,860,631	-		CCNA_03694	0.63	+0.0
3,860,633	-		CCNA_03694	0.63	+1.8
3,860,638	+		CCNA_03694	0.63	+0.1
3,860,649	+		CCNA_03694	0.64	+0.3
3,860,659	-		CCNA_03694	0.66	-0.1
3,860,661	-		CCNA_03694	0.66	+1.8
3,860,678	-		CCNA_03694	0.68	+1.1
3,860,686	-		CCNA_03694	0.68	-0.4
3,860,706	+		CCNA_03694	0.70	-0.1
3,860,746	+		CCNA_03694	0.75	+0.2
3,860,770	+		CCNA_03694	0.77	+0.8
3,860,770	+		CCNA_03694	0.77	-2.3
3,860,770	+		CCNA_03694	0.77	+0.7
3,860,770	+		CCNA_03694	0.77	-0.4
3,860,770	+		CCNA_03694	0.77	+1.0
3,860,770	+		CCNA_03694	0.77	-1.6
3,860,770	+		CCNA_03694	0.77	+0.7
3,860,770	+		CCNA_03694	0.77	+0.9
3,860,778	-		CCNA_03694	0.78	+0.6
3,860,778	-		CCNA_03694	0.78	+0.9
3,860,778	-		CCNA_03694	0.78	+0.3
3,860,778	-		CCNA_03694	0.78	+1.5
3,860,778	-		CCNA_03694	0.78	+1.1
3,860,782	-		CCNA_03694	0.79	+1.0
3,860,798	-		CCNA_03694	0.80	-1.3
3,860,815	-		CCNA_03694	0.82	+1.9
3,860,866	+		CCNA_03694	0.87	+0.9
3,860,874	-		CCNA_03694	0.88	+0.8
3,860,897	-				-1.4
3,860,916	-				+1.2
3,860,918	+				+0.5
3,860,928	+				+0.3
3,860,928	+				+1.5
3,860,928	+				-1.4
3,860,931	-				+0.5
3,860,936	+				-1.9
3,860,936	-				+1.3
3,860,936	-				+1.5
3,860,936	-				+1.6
3,860,936	-				+1.2
3,860,936	-				+1.4
3,860,936	-				+1.1
3,860,979	+				-0.3
3,860,995	+				-0.3
3,861,010	+				-0.7
3,861,046	-				+0.6
3,861,048	+				-0.7
3,861,048	+				+2.1
3,861,056	-				-0.7
3,861,056	-				+0.1
3,861,057	+				-0.5
3,861,061	-				-0.0
3,861,061	-				+0.7
3,861,061	-				-0.9
3,861,064	+				-0.6
3,861,091	-				+1.9
3,861,100	+				+0.5
3,861,120	+				-0.4
3,861,120	+				+1.1
3,861,139	+				-0.9
3,861,147	-				-0.3
3,861,147	-				+0.4
3,861,182	+				+1.0
3,861,268	+		CCNA_03695	0.11	+1.8
3,861,352	+		CCNA_03695	0.17	+1.8
3,861,373	+		CCNA_03695	0.18	+0.0
3,861,374	-		CCNA_03695	0.18	+0.5
3,861,379	-		CCNA_03695	0.18	-0.3
3,861,379	-		CCNA_03695	0.18	+0.8
3,861,386	+		CCNA_03695	0.19	+0.3
3,861,386	+		CCNA_03695	0.19	+0.2
3,861,386	+		CCNA_03695	0.19	-1.3
3,861,394	-		CCNA_03695	0.19	+1.6
3,861,398	+		CCNA_03695	0.20	-0.3
3,861,406	-		CCNA_03695	0.20	-1.9
3,861,428	+		CCNA_03695	0.22	+0.0
3,861,434	+		CCNA_03695	0.22	-0.1
3,861,452	+		CCNA_03695	0.23	+0.5
3,861,469	+		CCNA_03695	0.24	+0.7
3,861,469	+		CCNA_03695	0.24	+0.8
3,861,514	-		CCNA_03695	0.27	-1.7
3,861,547	-		CCNA_03695	0.30	+1.5
3,861,565	-		CCNA_03695	0.31	+0.8
3,861,570	-		CCNA_03695	0.31	+1.1
3,861,609	-		CCNA_03695	0.34	-0.3
3,861,609	-		CCNA_03695	0.34	-0.3
3,861,610	-		CCNA_03695	0.34	-0.3
3,861,612	+		CCNA_03695	0.34	+1.1
3,861,612	+		CCNA_03695	0.34	+1.0
3,861,620	-		CCNA_03695	0.34	+0.4
3,861,636	-				-0.9
3,861,637	-		CCNA_03695	0.35	-0.1
3,861,653	+		CCNA_03695	0.36	+0.8
3,861,656	-		CCNA_03695	0.37	-0.6
3,861,663	-		CCNA_03695	0.37	-0.8
3,861,675	+		CCNA_03695	0.38	+1.4
3,861,675	+		CCNA_03695	0.38	+1.3
3,861,691	+		CCNA_03695	0.39	+0.9
3,861,691	+		CCNA_03695	0.39	+1.6
3,861,699	-		CCNA_03695	0.40	+0.2
3,861,699	-		CCNA_03695	0.40	-0.1
3,861,731	+		CCNA_03695	0.42	+1.0
3,861,733	+		CCNA_03695	0.42	+1.0
3,861,739	-		CCNA_03695	0.42	+1.4
3,861,756	+		CCNA_03695	0.43	+1.1
3,861,780	+		CCNA_03695	0.45	+2.8
3,861,788	-		CCNA_03695	0.45	+2.1
3,861,788	-		CCNA_03695	0.45	-0.3
3,861,806	+		CCNA_03695	0.47	+1.4
3,861,806	+		CCNA_03695	0.47	+1.5
3,861,828	-		CCNA_03695	0.48	-0.5
3,861,855	+		CCNA_03695	0.50	+0.2
3,861,862	-		CCNA_03695	0.50	+0.7
3,861,862	-		CCNA_03695	0.50	+0.0
3,861,876	+		CCNA_03695	0.51	-1.1
3,861,876	+		CCNA_03695	0.51	+1.3
3,861,876	+		CCNA_03695	0.51	+0.7
3,861,884	-		CCNA_03695	0.52	+0.4
3,861,884	-		CCNA_03695	0.52	-0.1
3,861,884	-		CCNA_03695	0.52	+0.8
3,861,932	+		CCNA_03695	0.55	-0.0
3,861,942	+		CCNA_03695	0.55	-0.2
3,861,953	+		CCNA_03695	0.56	+0.3
3,861,953	+		CCNA_03695	0.56	+1.0
3,861,953	+		CCNA_03695	0.56	+1.8
3,861,961	-		CCNA_03695	0.57	+2.1
3,861,961	-		CCNA_03695	0.57	-0.1
3,861,963	+		CCNA_03695	0.57	+1.4
3,861,975	-		CCNA_03695	0.58	+0.4
3,861,977	+		CCNA_03695	0.58	-0.6
3,861,978	+		CCNA_03695	0.58	+0.7