Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03663

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
3,821,579	-				+0.2
3,821,579	-				-2.0
3,821,581	+				+0.8
3,821,587	+				+0.4
3,821,589	+				-0.1
3,821,596	+				+0.2
3,821,596	-				-0.5
3,821,604	-		CCNA_03661	0.11	+0.8
3,821,604	-		CCNA_03661	0.11	+0.3
3,821,604	-		CCNA_03661	0.11	+1.6
3,821,635	-		CCNA_03661	0.36	-0.3
3,821,689	+		CCNA_03661	0.79	-0.4
3,821,689	+		CCNA_03661	0.79	-0.3
3,821,692	-		CCNA_03661	0.81	+0.4
3,821,699	+		CCNA_03661	0.87	-2.4
3,821,734	+				-1.1
3,821,742	-				+0.0
3,821,742	-				-1.5
3,821,764	+				-0.9
3,821,766	+				-3.0
3,821,774	-				-0.3
3,821,823	+				-0.1
3,821,823	+				+0.5
3,821,831	-				-0.0
3,821,838	+				+0.6
3,821,876	-				-0.2
3,821,878	-				+0.3
3,821,897	-				+1.1
3,821,915	+				-1.2
3,821,915	+				+0.0
3,821,915	+				-0.8
3,821,923	-				+0.9
3,821,937	+				-1.5
3,821,965	+				-0.2
3,821,975	+				-0.7
3,821,978	-				-0.8
3,821,984	+				-1.4
3,821,985	+				+0.7
3,821,992	-				+1.1
3,821,995	-				-1.1
3,822,013	-				-0.6
3,822,064	+		CCNA_03662	0.13	-0.6
3,822,064	+		CCNA_03662	0.13	-0.1
3,822,067	-		CCNA_03662	0.14	-0.4
3,822,067	-		CCNA_03662	0.14	+0.1
3,822,069	+		CCNA_03662	0.14	-0.0
3,822,069	+		CCNA_03662	0.14	+0.9
3,822,069	+		CCNA_03662	0.14	-0.3
3,822,070	-		CCNA_03662	0.15	+0.3
3,822,072	-		CCNA_03662	0.15	-0.3
3,822,072	-		CCNA_03662	0.15	+0.3
3,822,072	-		CCNA_03662	0.15	+0.1
3,822,077	-		CCNA_03662	0.17	+3.1
3,822,077	-		CCNA_03662	0.17	+0.0
3,822,077	-		CCNA_03662	0.17	-0.7
3,822,091	+		CCNA_03662	0.20	+0.3
3,822,100	+		CCNA_03662	0.22	+1.1
3,822,119	+		CCNA_03662	0.27	-1.8
3,822,138	-		CCNA_03662	0.32	+0.5
3,822,161	+		CCNA_03662	0.38	+1.0
3,822,167	+		CCNA_03662	0.40	-0.2
3,822,168	+		CCNA_03662	0.40	-0.9
3,822,191	+		CCNA_03662	0.46	-0.8
3,822,290	-		CCNA_03662	0.72	+0.2
3,822,291	-		CCNA_03662	0.72	-1.7
3,822,351	+		CCNA_03662	0.87	-0.7
3,822,351	+		CCNA_03662	0.87	-0.6
3,822,379	+				+0.5
3,822,417	-				+0.8
3,822,458	+				+1.6
3,822,511	+				-0.3
3,822,518	+				+0.1
3,822,518	+				-0.9
3,822,519	-				-1.2
3,822,550	-				-3.4
3,822,557	+				-1.4
3,822,565	-				-4.6
3,822,565	-				-3.0
3,822,565	-				-4.2
3,822,584	-				-2.6
3,822,591	+				-0.9
3,822,630	-				-2.6
3,822,763	-		CCNA_03663	0.13	-2.7
3,822,788	+		CCNA_03663	0.14	-0.3
3,822,806	-		CCNA_03663	0.15	-2.7
3,822,809	-		CCNA_03663	0.15	-3.9
3,822,813	+		CCNA_03663	0.15	-0.7
3,822,844	+		CCNA_03663	0.17	-0.7
3,822,852	-		CCNA_03663	0.17	-1.8
3,822,861	+		CCNA_03663	0.17	-2.3
3,822,882	+		CCNA_03663	0.18	-3.3
3,822,890	-		CCNA_03663	0.19	-4.6
3,822,905	+		CCNA_03663	0.19	-0.9
3,822,931	-		CCNA_03663	0.20	-3.2
3,822,931	-		CCNA_03663	0.20	-2.1
3,822,936	-		CCNA_03663	0.21	-1.6
3,822,971	+		CCNA_03663	0.22	-2.0
3,822,971	+		CCNA_03663	0.22	-2.6
3,822,979	-		CCNA_03663	0.23	-4.9
3,823,099	-		CCNA_03663	0.28	-3.9
3,823,134	-		CCNA_03663	0.29	-4.4
3,823,155	-		CCNA_03663	0.30	-4.4
3,823,166	+		CCNA_03663	0.31	+1.1
3,823,189	+		CCNA_03663	0.32	+1.1
3,823,197	-		CCNA_03663	0.32	-4.4
3,823,208	-		CCNA_03663	0.33	-2.8
3,823,208	-		CCNA_03663	0.33	-3.5
3,823,208	-		CCNA_03663	0.33	-5.0
3,823,208	-		CCNA_03663	0.33	-3.3
3,823,208	-		CCNA_03663	0.33	-0.8
3,823,208	-		CCNA_03663	0.33	-1.7
3,823,229	+		CCNA_03663	0.33	-1.4
3,823,246	+		CCNA_03663	0.34	-0.3
3,823,246	+		CCNA_03663	0.34	-0.9
3,823,254	-		CCNA_03663	0.35	-1.6
3,823,275	-		CCNA_03663	0.35	-2.6
3,823,281	+		CCNA_03663	0.36	-4.2
3,823,296	-		CCNA_03663	0.36	-4.8
3,823,319	+		CCNA_03663	0.37	+0.5
3,823,327	-		CCNA_03663	0.38	-3.1
3,823,328	-		CCNA_03663	0.38	-3.5
3,823,347	+		CCNA_03663	0.39	-1.3
3,823,350	-		CCNA_03663	0.39	-1.8
3,823,351	+		CCNA_03663	0.39	-2.2
3,823,351	+		CCNA_03663	0.39	-0.7
3,823,351	+		CCNA_03663	0.39	-1.3
3,823,378	+		CCNA_03663	0.40	-1.1
3,823,378	+		CCNA_03663	0.40	-2.0
3,823,378	-		CCNA_03663	0.40	-3.8
3,823,412	-		CCNA_03663	0.41	-2.1
3,823,414	+		CCNA_03663	0.41	-1.4
3,823,414	+		CCNA_03663	0.41	+2.1
3,823,417	-		CCNA_03663	0.42	-1.0
3,823,422	-		CCNA_03663	0.42	-2.7
3,823,466	-		CCNA_03663	0.44	-1.7
3,823,471	+		CCNA_03663	0.44	-1.7
3,823,471	+		CCNA_03663	0.44	+0.1
3,823,471	+		CCNA_03663	0.44	-3.1
3,823,479	-		CCNA_03663	0.44	-2.4
3,823,498	-		CCNA_03663	0.45	-3.1
3,823,523	+		CCNA_03663	0.46	-3.0
3,823,540	-		CCNA_03663	0.47	-3.8
3,823,567	+		CCNA_03663	0.48	+0.5
3,823,570	-		CCNA_03663	0.48	-2.4
3,823,570	-		CCNA_03663	0.48	-2.8
3,823,598	+		CCNA_03663	0.49	-2.0
3,823,601	-		CCNA_03663	0.50	-1.9
3,823,607	+				-0.7
3,823,654	+		CCNA_03663	0.52	+0.1
3,823,677	-		CCNA_03663	0.53	-3.3
3,823,679	+		CCNA_03663	0.53	+1.1
3,823,686	-		CCNA_03663	0.53	-4.1
3,823,699	-		CCNA_03663	0.54	-3.2
3,823,742	-		CCNA_03663	0.56	-5.3
3,823,743	-		CCNA_03663	0.56	-3.1
3,823,754	+		CCNA_03663	0.56	+0.1
3,823,765	+		CCNA_03663	0.57	-3.6
3,823,765	+		CCNA_03663	0.57	+0.1
3,823,774	-		CCNA_03663	0.57	-2.6
3,823,775	+		CCNA_03663	0.57	-0.5
3,823,783	-		CCNA_03663	0.57	-2.4
3,823,785	+		CCNA_03663	0.58	-3.9
3,823,785	+		CCNA_03663	0.58	-3.6
3,823,789	+		CCNA_03663	0.58	-4.3
3,823,793	-		CCNA_03663	0.58	-3.0
3,823,824	-		CCNA_03663	0.59	-3.1
3,823,835	+		CCNA_03663	0.60	-0.9
3,823,835	+		CCNA_03663	0.60	-2.1
3,823,835	+		CCNA_03663	0.60	+0.1
3,823,843	-		CCNA_03663	0.60	-2.9
3,823,843	-		CCNA_03663	0.60	-5.1
3,823,843	-		CCNA_03663	0.60	-1.3
3,823,845	+		CCNA_03663	0.60	-4.7
3,823,845	+		CCNA_03663	0.60	-6.7
3,823,845	+		CCNA_03663	0.60	-4.0
3,823,845	+		CCNA_03663	0.60	-4.5
3,823,845	+		CCNA_03663	0.60	-3.9
3,823,845	+		CCNA_03663	0.60	-4.1
3,823,845	+		CCNA_03663	0.60	-3.6
3,823,845	+		CCNA_03663	0.60	-2.7
3,823,853	-		CCNA_03663	0.61	+1.1
3,823,853	-		CCNA_03663	0.61	+1.1
3,823,853	-		CCNA_03663	0.61	+2.1
3,823,860	-		CCNA_03663	0.61	-4.6
3,823,876	-		CCNA_03663	0.62	-3.0
3,823,948	+		CCNA_03663	0.65	+0.5
3,823,967	-		CCNA_03663	0.65	-2.1
3,823,969	+		CCNA_03663	0.66	-1.3
3,824,018	+		CCNA_03663	0.68	-3.0
3,824,018	+		CCNA_03663	0.68	-0.5
3,824,026	-		CCNA_03663	0.68	-1.5
3,824,028	+		CCNA_03663	0.68	-1.4
3,824,045	-		CCNA_03663	0.69	-1.8
3,824,051	+		CCNA_03663	0.69	-1.5
3,824,063	+		CCNA_03663	0.70	+0.5
3,824,063	+		CCNA_03663	0.70	-1.3
3,824,063	+		CCNA_03663	0.70	-0.9
3,824,063	+		CCNA_03663	0.70	-3.1
3,824,064	-		CCNA_03663	0.70	-0.5
3,824,071	-		CCNA_03663	0.70	-2.4
3,824,071	-		CCNA_03663	0.70	-3.1
3,824,071	-		CCNA_03663	0.70	-3.7
3,824,071	-		CCNA_03663	0.70	-4.2
3,824,071	-		CCNA_03663	0.70	-3.9
3,824,108	+		CCNA_03663	0.72	-1.6
3,824,108	+		CCNA_03663	0.72	-1.5
3,824,108	+		CCNA_03663	0.72	-1.9
3,824,108	+		CCNA_03663	0.72	-1.8
3,824,108	+		CCNA_03663	0.72	-2.2
3,824,108	+		CCNA_03663	0.72	-1.3
3,824,108	+		CCNA_03663	0.72	-2.8
3,824,110	-		CCNA_03663	0.72	-2.6
3,824,110	-		CCNA_03663	0.72	-3.1
3,824,110	-		CCNA_03663	0.72	-4.8
3,824,110	-		CCNA_03663	0.72	-4.9
3,824,110	-		CCNA_03663	0.72	-1.0
3,824,110	-		CCNA_03663	0.72	+0.8
3,824,116	-		CCNA_03663	0.72	-3.1
3,824,116	-		CCNA_03663	0.72	-1.8
3,824,116	-		CCNA_03663	0.72	-3.2
3,824,116	-		CCNA_03663	0.72	-4.1
3,824,116	-		CCNA_03663	0.72	-4.4
3,824,116	-		CCNA_03663	0.72	-4.6
3,824,116	-		CCNA_03663	0.72	-5.7
3,824,126	-		CCNA_03663	0.72	-5.6
3,824,152	+		CCNA_03663	0.74	-0.7
3,824,152	+		CCNA_03663	0.74	+0.1
3,824,169	+		CCNA_03663	0.74	-1.4
3,824,171	+		CCNA_03663	0.74	+0.2
3,824,195	+		CCNA_03663	0.75	-0.7
3,824,201	+		CCNA_03663	0.76	-0.7
3,824,209	-		CCNA_03663	0.76	-1.9
3,824,209	-		CCNA_03663	0.76	-3.4
3,824,209	-		CCNA_03663	0.76	-3.2
3,824,214	-		CCNA_03663	0.76	-2.7
3,824,219	+		CCNA_03663	0.76	+1.1
3,824,232	-		CCNA_03663	0.77	-2.3
3,824,232	-		CCNA_03663	0.77	-4.6
3,824,236	+		CCNA_03663	0.77	+0.5
3,824,242	-		CCNA_03663	0.77	-4.5
3,824,286	-		CCNA_03663	0.79	-2.7
3,824,288	+		CCNA_03663	0.79	+0.1
3,824,320	-		CCNA_03663	0.81	-5.6
3,824,322	-		CCNA_03663	0.81	-3.2
3,824,357	+		CCNA_03663	0.82	+1.1
3,824,357	+		CCNA_03663	0.82	-1.4
3,824,365	-		CCNA_03663	0.83	-4.2
3,824,372	-		CCNA_03663	0.83	-0.9
3,824,396	-		CCNA_03663	0.84	-1.1
3,824,408	-		CCNA_03663	0.85	-3.2
3,824,415	+		CCNA_03663	0.85	+0.1
3,824,480	+		CCNA_03663	0.88	-1.3
3,824,488	-		CCNA_03663	0.88	-4.2
3,824,488	-		CCNA_03663	0.88	-4.3
3,824,528	+		CCNA_03663	0.90	-2.1
3,824,534	+				-0.7
3,824,542	-				-2.7
3,824,548	-				-2.5
3,824,549	-				-1.6
3,824,585	+				-0.3
3,824,592	-				-3.2
3,824,612	+				-0.3
3,824,622	+				-0.5
3,824,630	-				-3.3
3,824,695	-				-4.6
3,824,701	-				-3.9
3,824,724	-				-3.7
3,824,724	-				-2.6
3,824,753	-				+0.5
3,824,811	+				-1.3
3,824,817	+				-0.3
3,824,818	-				+0.1
3,824,825	+				+0.8
3,824,840	-				-0.3
3,824,932	+				-1.4
3,824,932	+				-2.9
3,824,951	+				+0.2
3,824,951	+				+0.4
3,824,956	+				-0.8
3,824,959	-				-2.5
3,824,975	+				+0.3
3,824,975	+				-1.1
3,825,010	-				-0.8
3,825,010	-				-2.2
3,825,010	-				-1.7
3,825,010	-				-1.6