Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03292

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
3,458,076	+		CCNA_03291	0.13	+2.9
3,458,084	+		CCNA_03291	0.14	-0.4
3,458,099	+		CCNA_03291	0.15	-0.4
3,458,147	-		CCNA_03291	0.20	-0.4
3,458,241	-		CCNA_03291	0.29	-0.2
3,458,246	+		CCNA_03291	0.30	+0.1
3,458,273	+		CCNA_03291	0.32	-1.9
3,458,275	-		CCNA_03291	0.33	-0.7
3,458,278	+		CCNA_03291	0.33	-0.4
3,458,281	-		CCNA_03291	0.33	+1.1
3,458,286	-		CCNA_03291	0.34	+2.4
3,458,286	-		CCNA_03291	0.34	+0.5
3,458,286	-		CCNA_03291	0.34	-0.7
3,458,336	+		CCNA_03291	0.39	-0.9
3,458,344	-		CCNA_03291	0.40	-0.2
3,458,357	+		CCNA_03291	0.41	+0.6
3,458,363	+		CCNA_03291	0.41	-1.9
3,458,372	-		CCNA_03291	0.42	-1.3
3,458,384	-		CCNA_03291	0.44	-0.3
3,458,393	-		CCNA_03291	0.44	-0.1
3,458,458	+		CCNA_03291	0.51	-0.0
3,458,466	-		CCNA_03291	0.52	+0.5
3,458,466	-		CCNA_03291	0.52	+0.4
3,458,507	+		CCNA_03291	0.56	-1.2
3,458,515	-		CCNA_03291	0.57	+2.0
3,458,515	-		CCNA_03291	0.57	-1.1
3,458,580	+		CCNA_03291	0.63	-0.6
3,458,580	+		CCNA_03291	0.63	+1.1
3,458,580	+		CCNA_03291	0.63	-0.4
3,458,580	-		CCNA_03291	0.63	-0.3
3,458,588	-		CCNA_03291	0.64	-1.9
3,458,600	-		CCNA_03291	0.65	+0.5
3,458,602	+		CCNA_03291	0.65	+0.1
3,458,610	-		CCNA_03291	0.66	+0.1
3,458,615	-		CCNA_03291	0.67	-0.3
3,458,625	-		CCNA_03291	0.68	-0.4
3,458,648	+		CCNA_03291	0.70	-1.2
3,458,672	+		CCNA_03291	0.72	+0.1
3,458,679	-		CCNA_03291	0.73	+0.0
3,458,679	-		CCNA_03291	0.73	+0.1
3,458,679	-		CCNA_03291	0.73	+1.9
3,458,704	+		CCNA_03291	0.76	+0.7
3,458,714	-		CCNA_03291	0.77	+0.3
3,458,733	+		CCNA_03291	0.78	-1.6
3,458,741	-		CCNA_03291	0.79	+0.6
3,458,787	+		CCNA_03291	0.84	+0.6
3,458,787	+		CCNA_03291	0.84	-0.7
3,458,795	-		CCNA_03291	0.85	-0.7
3,458,795	-		CCNA_03291	0.85	-0.6
3,458,795	-		CCNA_03291	0.85	-0.0
3,458,797	+		CCNA_03291	0.85	-0.2
3,458,805	-				-0.0
3,458,823	+		CCNA_03291	0.87	+0.1
3,458,831	-		CCNA_03291	0.88	+0.5
3,458,913	+				+2.1
3,458,926	-				-0.7
3,458,936	-				+0.2
3,458,942	-				+0.0
3,458,969	-				+0.7
3,458,981	+				-0.7
3,459,002	-				+0.7
3,459,032	+				-1.7
3,459,032	+				+0.3
3,459,032	+				-1.4
3,459,032	+				-1.6
3,459,032	+				-1.8
3,459,032	+				+1.0
3,459,032	+				+1.0
3,459,032	+				-1.2
3,459,040	-				-0.5
3,459,040	-				-1.6
3,459,040	-				-1.3
3,459,040	-				-0.4
3,459,040	-				+0.4
3,459,040	-				+0.1
3,459,040	-				-0.1
3,459,040	-				+0.2
3,459,040	-				+0.2
3,459,040	-				+0.3
3,459,074	+				-1.2
3,459,125	-				-3.1
3,459,125	-				+0.6
3,459,187	+				-1.6
3,459,210	+				-0.4
3,459,210	+				-2.3
3,459,210	+				-1.0
3,459,218	-				-1.7
3,459,218	-				-1.8
3,459,218	-				-0.7
3,459,254	-		CCNA_03292	0.12	-1.9
3,459,254	-		CCNA_03292	0.12	-1.2
3,459,261	+		CCNA_03292	0.12	+1.1
3,459,269	-		CCNA_03292	0.12	-0.1
3,459,281	+		CCNA_03292	0.13	-0.9
3,459,284	-		CCNA_03292	0.13	-3.2
3,459,312	+		CCNA_03292	0.15	-2.9
3,459,318	-		CCNA_03292	0.16	+3.7
3,459,341	-		CCNA_03292	0.17	+2.1
3,459,345	+		CCNA_03292	0.17	-2.2
3,459,351	-		CCNA_03292	0.18	+0.6
3,459,381	+		CCNA_03292	0.20	-1.2
3,459,385	+		CCNA_03292	0.20	-0.1
3,459,404	+		CCNA_03292	0.21	+0.3
3,459,404	+		CCNA_03292	0.21	+0.2
3,459,410	+		CCNA_03292	0.22	-1.2
3,459,410	+		CCNA_03292	0.22	-1.5
3,459,422	-		CCNA_03292	0.22	+1.0
3,459,464	-		CCNA_03292	0.25	-1.2
3,459,475	+		CCNA_03292	0.26	+1.6
3,459,489	-		CCNA_03292	0.27	-0.7
3,459,579	+		CCNA_03292	0.32	+0.1
3,459,579	-		CCNA_03292	0.32	-0.2
3,459,588	+		CCNA_03292	0.33	+1.3
3,459,648	+		CCNA_03292	0.37	-0.9
3,459,657	+		CCNA_03292	0.37	+0.2
3,459,665	-		CCNA_03292	0.38	-0.2
3,459,671	+		CCNA_03292	0.38	-1.2
3,459,753	-		CCNA_03292	0.44	-1.0
3,459,753	-		CCNA_03292	0.44	-0.4
3,459,754	-		CCNA_03292	0.44	-1.1
3,459,869	+		CCNA_03292	0.51	+0.1
3,459,872	-		CCNA_03292	0.51	+0.1
3,459,893	+		CCNA_03292	0.53	-1.3
3,459,893	+		CCNA_03292	0.53	-1.0
3,459,901	-		CCNA_03292	0.53	-0.7
3,459,901	-		CCNA_03292	0.53	-0.4
3,459,901	-		CCNA_03292	0.53	+0.6
3,459,901	-		CCNA_03292	0.53	-0.4
3,459,932	+		CCNA_03292	0.55	+0.6
3,459,948	+		CCNA_03292	0.56	+0.6
3,459,972	-		CCNA_03292	0.58	+0.1
3,459,985	+		CCNA_03292	0.59	+0.8
3,459,997	+		CCNA_03292	0.59	-0.4
3,459,997	+		CCNA_03292	0.59	-1.1
3,460,005	-		CCNA_03292	0.60	+0.1
3,460,005	-		CCNA_03292	0.60	-0.7
3,460,006	+		CCNA_03292	0.60	-1.2
3,460,014	-		CCNA_03292	0.60	-0.0
3,460,051	-		CCNA_03292	0.63	-2.1
3,460,056	-		CCNA_03292	0.63	+0.6
3,460,121	-		CCNA_03292	0.67	+0.6
3,460,121	-		CCNA_03292	0.67	+0.6
3,460,144	-		CCNA_03292	0.69	-1.8
3,460,155	-		CCNA_03292	0.69	+0.6
3,460,156	+		CCNA_03292	0.70	-0.4
3,460,254	+		CCNA_03292	0.76	+0.1
3,460,270	+		CCNA_03292	0.77	+0.6
3,460,324	-		CCNA_03292	0.80	-3.0
3,460,372	+		CCNA_03292	0.83	+0.7
3,460,384	+		CCNA_03292	0.84	+0.1
3,460,384	+		CCNA_03292	0.84	-0.3
3,460,384	+		CCNA_03292	0.84	-0.4
3,460,384	+		CCNA_03292	0.84	+0.1
3,460,392	-		CCNA_03292	0.85	-2.4
3,460,406	+		CCNA_03292	0.86	-0.4
3,460,410	+		CCNA_03292	0.86	-0.0
3,460,420	+		CCNA_03292	0.87	-0.5
3,460,435	-		CCNA_03292	0.88	-1.3
3,460,448	-		CCNA_03292	0.88	+0.1
3,460,453	-		CCNA_03292	0.89	-0.5
3,460,466	-		CCNA_03292	0.90	-0.1
3,460,486	+				+0.2
3,460,538	+				+1.2
3,460,623	+				+0.6
3,460,625	-				-0.7
3,460,631	-				-0.2
3,460,631	-				-0.3
3,460,776	+				+0.9
3,460,776	+				-0.4
3,460,777	+				+1.1
3,460,777	+				-1.7
3,460,784	-				-0.5
3,460,800	+				-2.6
3,460,820	+				+2.1
3,460,844	-				+0.0
3,460,849	-				+1.3
3,460,851	+				+1.7
3,460,851	+				+0.6
3,460,851	+				-2.2
3,460,859	-				-0.8
3,460,859	-				-0.1
3,460,879	-				+1.0
3,460,889	-				-0.8
3,460,893	+				+2.1
3,460,961	+		CCNA_03293	0.11	-0.9
3,460,975	+		CCNA_03293	0.12	-1.4
3,460,983	-		CCNA_03293	0.13	-2.2
3,460,983	-		CCNA_03293	0.13	+0.8
3,460,983	-		CCNA_03293	0.13	-2.5
3,460,997	+		CCNA_03293	0.13	+0.7
3,460,997	+		CCNA_03293	0.13	-0.8
3,461,023	+		CCNA_03293	0.14	+1.1
3,461,059	-		CCNA_03293	0.16	-0.1
3,461,064	-		CCNA_03293	0.16	+0.1
3,461,077	+		CCNA_03293	0.17	-1.4
3,461,084	-		CCNA_03293	0.17	-1.8
3,461,084	-		CCNA_03293	0.17	-0.6
3,461,090	+		CCNA_03293	0.18	-0.7
3,461,155	+		CCNA_03293	0.21	+1.2
3,461,166	+		CCNA_03293	0.21	-0.0
3,461,166	+		CCNA_03293	0.21	+0.6
3,461,172	-		CCNA_03293	0.22	-1.1
3,461,177	+		CCNA_03293	0.22	-0.2
3,461,180	-		CCNA_03293	0.22	+0.1
3,461,185	-		CCNA_03293	0.22	+0.4
3,461,185	-		CCNA_03293	0.22	-0.9
3,461,252	+		CCNA_03293	0.25	+0.6
3,461,252	+		CCNA_03293	0.25	+0.6
3,461,253	-		CCNA_03293	0.25	-1.4
3,461,260	-		CCNA_03293	0.26	-0.4
3,461,274	+		CCNA_03293	0.26	-1.6
3,461,311	-		CCNA_03293	0.28	-0.0
3,461,322	+		CCNA_03293	0.29	-0.3
3,461,330	-		CCNA_03293	0.29	-0.6
3,461,330	-		CCNA_03293	0.29	-2.9
3,461,350	+		CCNA_03293	0.30	-1.4
3,461,391	+		CCNA_03293	0.32	-2.0
3,461,391	+		CCNA_03293	0.32	-1.2
3,461,391	+		CCNA_03293	0.32	-0.3
3,461,391	+		CCNA_03293	0.32	-1.3
3,461,391	+		CCNA_03293	0.32	-0.9
3,461,399	-		CCNA_03293	0.32	-2.0
3,461,399	-		CCNA_03293	0.32	-1.4
3,461,399	-		CCNA_03293	0.32	-1.3
3,461,399	-		CCNA_03293	0.32	+0.6
3,461,399	-		CCNA_03293	0.32	+0.1
3,461,399	-		CCNA_03293	0.32	+3.6
3,461,401	+		CCNA_03293	0.33	-0.3
3,461,409	-		CCNA_03293	0.33	+1.1
3,461,409	-		CCNA_03293	0.33	-0.2
3,461,450	-		CCNA_03293	0.35	-0.3
3,461,517	-		CCNA_03293	0.38	-1.2
3,461,542	+		CCNA_03293	0.39	-1.7
3,461,547	+		CCNA_03293	0.40	+0.2
3,461,572	-		CCNA_03293	0.41	+1.7
3,461,582	-		CCNA_03293	0.41	+2.1
3,461,589	+		CCNA_03293	0.42	-0.6
3,461,599	+		CCNA_03293	0.42	-0.9