Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03206

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
3,367,266	+		CCNA_03205	0.52	+0.1
3,367,266	+		CCNA_03205	0.52	-0.8
3,367,266	+		CCNA_03205	0.52	-0.7
3,367,266	+		CCNA_03205	0.52	-1.2
3,367,266	+		CCNA_03205	0.52	-1.7
3,367,266	+		CCNA_03205	0.52	-3.1
3,367,274	-		CCNA_03205	0.53	-1.4
3,367,274	-		CCNA_03205	0.53	-0.3
3,367,280	-		CCNA_03205	0.53	-2.0
3,367,289	-		CCNA_03205	0.53	+0.2
3,367,408	+		CCNA_03205	0.61	-1.0
3,367,415	-		CCNA_03205	0.61	-1.4
3,367,420	+		CCNA_03205	0.61	-1.4
3,367,520	+		CCNA_03205	0.67	-1.3
3,367,545	-		CCNA_03205	0.69	+1.2
3,367,599	+		CCNA_03205	0.72	-0.3
3,367,626	-		CCNA_03205	0.74	-0.4
3,367,638	+		CCNA_03205	0.75	-2.4
3,367,641	-		CCNA_03205	0.75	+2.2
3,367,646	-		CCNA_03205	0.75	-1.2
3,367,695	+		CCNA_03205	0.78	+0.2
3,367,695	+		CCNA_03205	0.78	-2.1
3,367,695	+		CCNA_03205	0.78	-2.8
3,367,695	+		CCNA_03205	0.78	-0.2
3,367,695	+		CCNA_03205	0.78	-1.4
3,367,703	-		CCNA_03205	0.78	-2.9
3,367,729	-		CCNA_03205	0.80	-2.3
3,367,797	+		CCNA_03205	0.84	-0.5
3,367,810	-		CCNA_03205	0.85	-1.5
3,367,813	+		CCNA_03205	0.85	-1.0
3,367,813	+		CCNA_03205	0.85	-0.7
3,367,813	+		CCNA_03205	0.85	+0.2
3,367,880	-		CCNA_03205	0.89	-0.4
3,367,945	+				+0.2
3,367,945	+				+0.4
3,367,950	+				-0.3
3,367,950	+				+0.3
3,367,950	+				+0.5
3,367,950	+				-0.5
3,367,953	-				-1.2
3,367,958	-				-1.7
3,367,958	-				-1.3
3,367,958	-				+0.2
3,367,991	+				+0.3
3,368,016	+				+1.0
3,368,016	+				+0.2
3,368,016	+				-0.3
3,368,016	+				+0.4
3,368,016	+				+0.4
3,368,016	+				-0.7
3,368,016	+				+0.2
3,368,016	+				-0.0
3,368,024	-				-1.7
3,368,024	-				+0.6
3,368,094	+				+0.3
3,368,094	+				-0.1
3,368,094	+				+0.8
3,368,094	+				-0.1
3,368,102	-				-0.6
3,368,126	+				+0.6
3,368,126	+				+0.5
3,368,141	+				+0.2
3,368,141	+				+0.3
3,368,169	-				+0.1
3,368,244	-				-2.1
3,368,295	+				-2.7
3,368,303	+				-1.8
3,368,327	-				-4.3
3,368,327	-				-1.3
3,368,347	+				-1.4
3,368,407	+		CCNA_03206	0.11	-3.3
3,368,407	+		CCNA_03206	0.11	-2.2
3,368,407	+		CCNA_03206	0.11	-3.7
3,368,415	-		CCNA_03206	0.11	-2.6
3,368,420	-		CCNA_03206	0.11	-1.8
3,368,510	+		CCNA_03206	0.18	-3.6
3,368,517	-		CCNA_03206	0.18	-0.2
3,368,522	+		CCNA_03206	0.19	-3.3
3,368,522	+		CCNA_03206	0.19	-0.6
3,368,524	+		CCNA_03206	0.19	-1.2
3,368,530	-		CCNA_03206	0.19	-1.7
3,368,532	-		CCNA_03206	0.20	-1.7
3,368,557	+		CCNA_03206	0.21	-2.5
3,368,562	-		CCNA_03206	0.22	-0.6
3,368,577	+		CCNA_03206	0.23	-4.7
3,368,639	+		CCNA_03206	0.27	-3.6
3,368,647	-		CCNA_03206	0.28	-0.2
3,368,647	-		CCNA_03206	0.28	-0.4
3,368,652	-		CCNA_03206	0.28	-2.2
3,368,652	-		CCNA_03206	0.28	-3.4
3,368,654	+		CCNA_03206	0.28	-2.0
3,368,667	-		CCNA_03206	0.29	-1.2
3,368,669	+		CCNA_03206	0.29	-3.5
3,368,670	+		CCNA_03206	0.29	-2.2
3,368,674	+		CCNA_03206	0.30	-3.0
3,368,674	+		CCNA_03206	0.30	-1.6
3,368,674	+		CCNA_03206	0.30	-1.8
3,368,699	-		CCNA_03206	0.32	-1.8
3,368,756	+		CCNA_03206	0.36	-3.7
3,368,793	+		CCNA_03206	0.38	-1.2
3,368,816	+		CCNA_03206	0.40	-0.2
3,368,838	-		CCNA_03206	0.42	-1.6
3,368,842	+		CCNA_03206	0.42	-3.0
3,368,878	+		CCNA_03206	0.44	-1.5
3,368,923	+		CCNA_03206	0.48	-0.5
3,368,923	+		CCNA_03206	0.48	-1.5
3,368,928	+		CCNA_03206	0.48	-2.4
3,368,931	-		CCNA_03206	0.48	+0.6
3,368,978	+		CCNA_03206	0.52	-1.7
3,368,986	-		CCNA_03206	0.52	-1.2
3,369,002	+		CCNA_03206	0.53	-1.4
3,369,019	-		CCNA_03206	0.55	-1.4
3,369,053	+		CCNA_03206	0.57	+2.2
3,369,078	-		CCNA_03206	0.59	-1.2
3,369,078	-		CCNA_03206	0.59	-3.2
3,369,078	-		CCNA_03206	0.59	-2.6
3,369,125	+		CCNA_03206	0.62	-4.2
3,369,156	+		CCNA_03206	0.64	+0.4
3,369,186	+		CCNA_03206	0.67	-2.2
3,369,205	+		CCNA_03206	0.68	-1.4
3,369,233	-		CCNA_03206	0.70	-0.2
3,369,255	-		CCNA_03206	0.72	-1.2
3,369,268	-		CCNA_03206	0.72	-0.4
3,369,307	+		CCNA_03206	0.75	-1.9
3,369,358	+		CCNA_03206	0.79	-1.6
3,369,402	-		CCNA_03206	0.82	-0.2
3,369,411	+		CCNA_03206	0.83	-3.2
3,369,421	+		CCNA_03206	0.84	-4.0
3,369,450	-		CCNA_03206	0.86	-1.3
3,369,515	+				-2.9
3,369,543	-				+0.6
3,369,613	+				-2.0
3,369,633	+				-2.1
3,369,636	+				-2.0
3,369,651	-				-1.2
3,369,684	+				+0.5
3,369,688	-				+0.2
3,369,748	-				+0.6
3,369,751	+				-1.3
3,369,751	+				-1.7
3,369,751	+				-0.5
3,369,759	-				+0.5
3,369,761	+				-1.0
3,369,872	-		CCNA_03207	0.14	+0.9
3,369,886	+		CCNA_03207	0.16	-0.2
3,369,933	+		CCNA_03207	0.22	-0.3
3,370,036	-		CCNA_03207	0.34	+1.2
3,370,040	+		CCNA_03207	0.35	+0.1
3,370,062	-		CCNA_03207	0.37	-0.4
3,370,068	+		CCNA_03207	0.38	+0.4
3,370,119	+		CCNA_03207	0.44	-0.6
3,370,119	+		CCNA_03207	0.44	-0.8
3,370,134	+		CCNA_03207	0.46	-0.3
3,370,134	+		CCNA_03207	0.46	+0.7
3,370,134	+		CCNA_03207	0.46	-0.4
3,370,134	+		CCNA_03207	0.46	-0.9
3,370,142	-		CCNA_03207	0.47	-1.8
3,370,236	+		CCNA_03207	0.58	+0.5
3,370,236	+		CCNA_03207	0.58	+0.8
3,370,236	+		CCNA_03207	0.58	+0.7
3,370,293	+		CCNA_03207	0.65	+0.4
3,370,299	-		CCNA_03207	0.66	+0.6
3,370,299	-		CCNA_03207	0.66	-2.2
3,370,300	+		CCNA_03207	0.66	-0.0
3,370,301	-		CCNA_03207	0.66	-0.7
3,370,307	+		CCNA_03207	0.67	-0.2
3,370,307	+		CCNA_03207	0.67	+0.7
3,370,308	-		CCNA_03207	0.67	+1.7
3,370,308	-		CCNA_03207	0.67	-0.8
3,370,310	+		CCNA_03207	0.67	-0.1
3,370,315	-		CCNA_03207	0.68	+0.2
3,370,327	+		CCNA_03207	0.69	+0.7
3,370,327	+		CCNA_03207	0.69	+0.6
3,370,327	+		CCNA_03207	0.69	+1.1
3,370,335	-		CCNA_03207	0.70	-1.8
3,370,352	+		CCNA_03207	0.72	+0.6
3,370,393	-		CCNA_03207	0.77	-1.2
3,370,416	-		CCNA_03207	0.80	+0.1
3,370,440	+		CCNA_03207	0.83	+0.4
3,370,523	+				+0.6
3,370,529	-				-1.6
3,370,575	-				+0.3
3,370,588	+				+0.3
3,370,588	+				+0.2
3,370,588	-				+0.2
3,370,594	+				-0.1
3,370,600	+				+0.0
3,370,600	+				+0.6
3,370,600	+				+0.5
3,370,600	+				+1.1
3,370,600	+				+0.3
3,370,600	+				+0.2
3,370,600	+				+0.0
3,370,600	+				+0.1
3,370,600	+				+0.5
3,370,600	+				+0.3
3,370,600	+				+0.6
3,370,600	+				+0.5
3,370,600	+				-1.8
3,370,608	-				+0.9
3,370,608	-				-1.8
3,370,608	-				-0.2
3,370,608	-				+0.5
3,370,608	-				-2.6
3,370,613	-				+2.8
3,370,615	-				-0.2
3,370,633	+				-1.2
3,370,644	+				+0.4
3,370,644	+				-0.1
3,370,644	+				-1.8
3,370,644	+				+0.3