Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02866

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
3,018,030	-		CCNA_02864	0.68	+0.0
3,018,030	-		CCNA_02864	0.68	-0.0
3,018,034	+		CCNA_02864	0.69	-1.9
3,018,053	-		CCNA_02864	0.72	-0.2
3,018,096	+		CCNA_02864	0.79	+1.1
3,018,111	-		CCNA_02864	0.81	-0.2
3,018,153	-		CCNA_02864	0.88	-0.2
3,018,169	+				-0.8
3,018,169	+				-0.8
3,018,174	+				+0.8
3,018,174	+				-0.2
3,018,174	+				+0.4
3,018,177	-				-0.9
3,018,182	-				+2.4
3,018,182	-				+0.9
3,018,192	+				+0.0
3,018,200	-				+0.7
3,018,209	-				-0.8
3,018,226	+				-0.7
3,018,231	+				-0.2
3,018,239	-				+2.0
3,018,253	-				-1.3
3,018,273	+				-0.7
3,018,281	+				-0.2
3,018,282	+				+0.9
3,018,282	-				+0.3
3,018,296	-		CCNA_02865	0.11	-1.6
3,018,296	-		CCNA_02865	0.11	-0.3
3,018,375	+		CCNA_02865	0.23	+0.3
3,018,375	+		CCNA_02865	0.23	-2.7
3,018,383	-		CCNA_02865	0.24	+0.3
3,018,383	-		CCNA_02865	0.24	-1.2
3,018,383	-		CCNA_02865	0.24	-1.5
3,018,383	-		CCNA_02865	0.24	-1.0
3,018,383	-		CCNA_02865	0.24	+0.3
3,018,383	-		CCNA_02865	0.24	-1.9
3,018,384	+		CCNA_02865	0.25	+2.3
3,018,384	+		CCNA_02865	0.25	-1.0
3,018,486	+		CCNA_02865	0.41	-0.8
3,018,495	-		CCNA_02865	0.42	+0.3
3,018,524	+		CCNA_02865	0.47	-0.7
3,018,524	+		CCNA_02865	0.47	-0.2
3,018,526	+		CCNA_02865	0.47	-0.2
3,018,533	-		CCNA_02865	0.48	+0.4
3,018,539	-		CCNA_02865	0.49	-0.2
3,018,610	-		CCNA_02865	0.60	-1.7
3,018,634	+		CCNA_02865	0.64	+2.3
3,018,642	-		CCNA_02865	0.65	-0.0
3,018,687	+		CCNA_02865	0.72	-2.0
3,018,694	-		CCNA_02865	0.73	+0.2
3,018,709	-		CCNA_02865	0.76	+0.5
3,018,714	-		CCNA_02865	0.76	-1.0
3,018,775	-		CCNA_02865	0.86	+1.0
3,018,785	-		CCNA_02865	0.88	+0.3
3,018,802	-				+1.3
3,018,813	+				-1.4
3,018,821	-				-0.0
3,018,827	-				+1.3
3,018,840	-				-1.5
3,018,909	-				+1.0
3,018,937	+				-1.2
3,018,946	-				+0.0
3,018,967	+				+0.8
3,018,977	+				-1.1
3,018,982	+				+0.9
3,019,031	-				+0.0
3,019,119	-		CCNA_02866	0.23	+0.0
3,019,171	-		CCNA_02866	0.34	-1.2
3,019,171	-		CCNA_02866	0.34	+0.0
3,019,197	+		CCNA_02866	0.40	-5.8
3,019,218	+		CCNA_02866	0.45	-3.7
3,019,218	+		CCNA_02866	0.45	-2.0
3,019,242	+		CCNA_02866	0.50	-4.0
3,019,250	+		CCNA_02866	0.51	-3.3
3,019,271	-		CCNA_02866	0.56	+1.3
3,019,298	+		CCNA_02866	0.62	-1.9
3,019,298	+		CCNA_02866	0.62	-4.1
3,019,301	-		CCNA_02866	0.62	-1.0
3,019,306	-		CCNA_02866	0.63	-3.2
3,019,306	-		CCNA_02866	0.63	-0.5
3,019,306	-		CCNA_02866	0.63	-3.6
3,019,309	+		CCNA_02866	0.64	-2.5
3,019,331	-		CCNA_02866	0.69	-3.5
3,019,373	-		CCNA_02866	0.78	-2.0
3,019,384	+		CCNA_02866	0.80	-2.2
3,019,392	-		CCNA_02866	0.82	-1.7
3,019,410	-		CCNA_02866	0.86	-0.8
3,019,410	-		CCNA_02866	0.86	-3.6
3,019,451	-				-1.8
3,019,456	-				-0.8
3,019,490	-				+2.3
3,019,506	+				-0.2
3,019,506	+				-0.6
3,019,514	-				+0.3
3,019,538	+				+0.0
3,019,538	+				+0.4
3,019,546	-				+1.3
3,019,557	-				+2.3
3,019,557	-				+0.3
3,019,610	+				+0.9
3,019,610	+				-0.2
3,019,618	-				+0.0
3,019,618	-				+0.4
3,019,663	+				+1.6
3,019,663	+				-0.6
3,019,663	+				-0.1
3,019,663	+				-1.7
3,019,663	+				-0.8
3,019,663	+				+0.8
3,019,671	-				-1.6
3,019,671	-				-0.2
3,019,671	-				-0.4
3,019,671	-				-1.0
3,019,671	-				-0.2
3,019,671	-				+0.2
3,019,671	-				-0.5
3,019,682	+				-0.3
3,019,683	+				+3.4
3,019,685	-				+0.5
3,019,688	+				-0.6
3,019,688	+				-1.6
3,019,690	-				+0.2
3,019,696	-				+0.2
3,019,696	-				-1.0
3,019,696	-				-0.4
3,019,714	+		CCNA_02867	0.13	-0.2
3,019,723	-		CCNA_02867	0.15	-0.2
3,019,728	-		CCNA_02867	0.16	-0.8
3,019,728	-		CCNA_02867	0.16	-0.9
3,019,736	+		CCNA_02867	0.17	-0.4
3,019,744	-		CCNA_02867	0.19	-0.0
3,019,813	+		CCNA_02867	0.32	-2.0
3,019,813	+		CCNA_02867	0.32	+0.2
3,019,821	-		CCNA_02867	0.34	+0.0
3,019,821	-		CCNA_02867	0.34	-0.6
3,019,840	-		CCNA_02867	0.38	+1.5
3,019,890	+		CCNA_02867	0.48	+0.0
3,019,890	+		CCNA_02867	0.48	-1.2
3,019,898	-		CCNA_02867	0.49	+1.4
3,019,922	+		CCNA_02867	0.54	-0.1
3,019,943	+		CCNA_02867	0.58	+1.4
3,019,943	+		CCNA_02867	0.58	-0.1
3,019,943	+		CCNA_02867	0.58	-0.2
3,019,951	-		CCNA_02867	0.60	-1.0
3,019,962	+		CCNA_02867	0.62	+2.0
3,019,966	-		CCNA_02867	0.63	-0.1
3,020,000	+		CCNA_02867	0.69	-0.4
3,020,000	+		CCNA_02867	0.69	-2.6
3,020,008	-		CCNA_02867	0.71	+0.8
3,020,009	-		CCNA_02867	0.71	-2.0
3,020,015	-		CCNA_02867	0.72	-1.0
3,020,041	-		CCNA_02867	0.77	+0.2
3,020,041	-		CCNA_02867	0.77	-0.6
3,020,085	-		CCNA_02867	0.86	-0.6
3,020,085	-		CCNA_02867	0.86	-0.7
3,020,085	-		CCNA_02867	0.86	+0.0
3,020,085	-		CCNA_02867	0.86	+0.3
3,020,087	+		CCNA_02867	0.86	+0.3
3,020,087	+		CCNA_02867	0.86	-1.0
3,020,087	+		CCNA_02867	0.86	-0.2
3,020,087	+		CCNA_02867	0.86	+0.3
3,020,087	+		CCNA_02867	0.86	-0.2
3,020,087	+		CCNA_02867	0.86	+1.3
3,020,087	+		CCNA_02867	0.86	-1.7
3,020,095	-		CCNA_02867	0.88	+1.0
3,020,095	-		CCNA_02867	0.88	-0.7
3,020,095	-		CCNA_02867	0.88	-0.9
3,020,095	-		CCNA_02867	0.88	-0.8
3,020,095	-		CCNA_02867	0.88	-0.3
3,020,095	-		CCNA_02867	0.88	-0.4
3,020,095	-		CCNA_02867	0.88	-1.7
3,020,177	-		CCNA_02868	0.14	+0.3
3,020,182	-		CCNA_02868	0.17	+0.4
3,020,190	+		CCNA_02868	0.21	+0.5
3,020,194	+		CCNA_02868	0.23	-0.9
3,020,209	+		CCNA_02868	0.32	+0.1
3,020,217	-		CCNA_02868	0.36	+0.1
3,020,217	-		CCNA_02868	0.36	+0.2
3,020,267	+		CCNA_02868	0.64	-2.4
3,020,275	-		CCNA_02868	0.68	-0.9
3,020,416	+		CCNA_02869	0.31	-1.1
3,020,416	+		CCNA_02869	0.31	-0.5
3,020,424	-		CCNA_02869	0.34	-0.2
3,020,424	-		CCNA_02869	0.34	-1.0
3,020,424	-		CCNA_02869	0.34	-0.7
3,020,455	+		CCNA_02869	0.45	-1.1
3,020,455	+		CCNA_02869	0.45	-0.5
3,020,458	-		CCNA_02869	0.46	-0.6
3,020,460	+		CCNA_02869	0.46	-2.4