Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02756

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,919,097	+		CCNA_02754	0.87	+0.8
2,919,111	-		CCNA_02754	0.88	+0.5
2,919,123	-		CCNA_02754	0.89	+0.1
2,919,163	+				+1.4
2,919,163	+				+0.4
2,919,168	+				+0.4
2,919,171	-				-0.4
2,919,171	-				+3.4
2,919,192	+				+2.8
2,919,200	-				-0.7
2,919,205	-				+0.2
2,919,206	-				+0.4
2,919,244	+				+0.8
2,919,274	-				-0.3
2,919,282	-				-0.0
2,919,282	-				+0.6
2,919,308	+				+1.4
2,919,328	+				+1.4
2,919,328	+				+0.1
2,919,345	+				-1.0
2,919,350	+				-0.6
2,919,353	-				-1.0
2,919,404	+				+1.4
2,919,409	+				+1.2
2,919,409	+				-0.8
2,919,409	+				-0.9
2,919,422	-				+0.1
2,919,720	+		CCNA_02755	0.12	-1.7
2,919,745	+		CCNA_02755	0.19	-1.6
2,919,748	-		CCNA_02755	0.19	-0.4
2,919,753	-		CCNA_02755	0.21	-0.7
2,919,774	+		CCNA_02755	0.26	-0.9
2,919,774	+		CCNA_02755	0.26	-1.9
2,919,774	+		CCNA_02755	0.26	-0.6
2,919,778	+		CCNA_02755	0.27	-2.0
2,919,778	+		CCNA_02755	0.27	-0.7
2,919,779	+		CCNA_02755	0.27	-0.6
2,919,780	+		CCNA_02755	0.27	-2.2
2,919,786	-		CCNA_02755	0.29	+0.3
2,919,787	-		CCNA_02755	0.29	+0.8
2,919,797	+		CCNA_02755	0.32	+0.8
2,919,797	+		CCNA_02755	0.32	-2.0
2,919,805	-		CCNA_02755	0.34	-0.6
2,919,850	-		CCNA_02755	0.45	-0.9
2,919,850	-		CCNA_02755	0.45	-0.2
2,919,854	+		CCNA_02755	0.46	-1.8
2,919,954	+		CCNA_02755	0.71	-1.5
2,919,954	+		CCNA_02755	0.71	-2.0
2,919,974	+		CCNA_02755	0.76	-1.0
2,919,975	-		CCNA_02755	0.76	-1.6
2,919,975	-		CCNA_02755	0.76	-2.2
2,919,980	+		CCNA_02755	0.77	+0.6
2,919,980	+		CCNA_02755	0.77	-0.2
2,919,988	-		CCNA_02755	0.79	+0.2
2,920,037	+				+0.1
2,920,045	-				-1.2
2,920,076	+				-1.4
2,920,086	+				-1.6
2,920,092	+				-0.7
2,920,118	+				-1.2
2,920,125	+				-0.4
2,920,125	+				+0.4
2,920,126	-				-2.0
2,920,133	-				-1.8
2,920,133	-				-1.9
2,920,133	-				-2.8
2,920,147	-				-2.8
2,920,151	+		CCNA_02756	0.10	-0.2
2,920,151	+		CCNA_02756	0.10	+0.8
2,920,157	-		CCNA_02756	0.11	-1.9
2,920,157	-		CCNA_02756	0.11	-1.9
2,920,157	-		CCNA_02756	0.11	-0.7
2,920,159	-		CCNA_02756	0.11	-1.8
2,920,159	-		CCNA_02756	0.11	-0.5
2,920,159	-		CCNA_02756	0.11	-1.3
2,920,255	+				+2.4
2,920,259	-		CCNA_02756	0.25	-1.2
2,920,259	-		CCNA_02756	0.25	-2.0
2,920,263	+		CCNA_02756	0.25	-0.5
2,920,263	+		CCNA_02756	0.25	-1.3
2,920,265	+		CCNA_02756	0.25	-0.4
2,920,271	-		CCNA_02756	0.26	-1.5
2,920,271	-		CCNA_02756	0.26	-1.2
2,920,271	-		CCNA_02756	0.26	-2.1
2,920,271	-		CCNA_02756	0.26	-2.3
2,920,273	-		CCNA_02756	0.26	-0.4
2,920,278	+		CCNA_02756	0.27	-0.7
2,920,314	+		CCNA_02756	0.32	+0.4
2,920,314	+		CCNA_02756	0.32	+0.4
2,920,314	+		CCNA_02756	0.32	+0.1
2,920,314	+		CCNA_02756	0.32	-0.2
2,920,314	+		CCNA_02756	0.32	+0.2
2,920,319	+		CCNA_02756	0.32	+0.4
2,920,322	-		CCNA_02756	0.33	-3.3
2,920,322	-		CCNA_02756	0.33	-0.7
2,920,322	-		CCNA_02756	0.33	-1.5
2,920,322	-		CCNA_02756	0.33	+2.4
2,920,322	-		CCNA_02756	0.33	-2.5
2,920,322	-		CCNA_02756	0.33	-3.9
2,920,327	+		CCNA_02756	0.33	+0.1
2,920,327	+		CCNA_02756	0.33	+0.4
2,920,354	-		CCNA_02756	0.37	-2.6
2,920,367	-		CCNA_02756	0.39	-0.5
2,920,397	-		CCNA_02756	0.43	-2.2
2,920,397	-		CCNA_02756	0.43	-0.1
2,920,408	-		CCNA_02756	0.44	-2.0
2,920,414	-		CCNA_02756	0.45	-1.6
2,920,415	-		CCNA_02756	0.45	-1.0
2,920,446	-		CCNA_02756	0.49	-1.5
2,920,451	-		CCNA_02756	0.50	-0.3
2,920,505	-		CCNA_02756	0.57	-2.8
2,920,509	+		CCNA_02756	0.57	-0.2
2,920,509	+		CCNA_02756	0.57	-0.9
2,920,530	+		CCNA_02756	0.60	-0.7
2,920,533	-		CCNA_02756	0.61	+0.4
2,920,536	+		CCNA_02756	0.61	-1.2
2,920,544	+		CCNA_02756	0.62	-0.8
2,920,583	-		CCNA_02756	0.67	-2.1
2,920,590	-		CCNA_02756	0.68	-1.5
2,920,609	+		CCNA_02756	0.71	-1.7
2,920,609	+		CCNA_02756	0.71	+1.4
2,920,617	-		CCNA_02756	0.72	-2.4
2,920,645	-		CCNA_02756	0.75	-1.2
2,920,645	-		CCNA_02756	0.75	-0.9
2,920,657	-		CCNA_02756	0.77	-2.7
2,920,673	-		CCNA_02756	0.79	+0.1
2,920,678	-		CCNA_02756	0.80	-0.9
2,920,686	+		CCNA_02756	0.81	-0.9
2,920,714	+		CCNA_02756	0.84	+0.8
2,920,714	+		CCNA_02756	0.84	-1.4
2,920,714	+		CCNA_02756	0.84	-0.7
2,920,714	+		CCNA_02756	0.84	-1.0
2,920,714	+		CCNA_02756	0.84	-0.6
2,920,714	+		CCNA_02756	0.84	-1.9
2,920,722	-		CCNA_02756	0.86	-2.1
2,920,728	-		CCNA_02756	0.86	+0.9
2,920,749	+		CCNA_02756	0.89	-2.9
2,920,757	-				-0.2
2,920,757	-				-1.7
2,920,771	-				-1.3
2,920,807	-				+1.4
2,920,812	-				+1.4
2,920,850	-				-1.5
2,920,859	+				-0.6
2,920,859	+				-0.7
2,920,860	-				+1.4
2,920,861	-				-0.6
2,920,861	-				+1.8
2,920,867	-				+0.4
2,920,867	-				-1.3
2,920,867	-				-1.2
2,920,867	-				-0.7
2,920,869	+				-0.1
2,920,869	+				+0.1
2,920,869	+				-2.5
2,920,869	+				+0.6
2,920,869	+				-0.6
2,920,869	+				-0.2
2,920,875	+				+1.3
2,920,875	+				-0.4
2,920,877	-				-0.6
2,920,883	-				-0.2
2,920,883	-				-0.3
2,920,929	-				+0.4
2,920,946	-				+0.8
2,920,950	+				-1.0
2,920,951	-				+0.2
2,920,966	-				-0.6
2,920,972	+				-1.8
2,920,980	-				+0.3
2,920,981	-				-0.5
2,921,047	-				-0.4
2,921,047	-				-0.7
2,921,047	-				+0.5
2,921,097	-		CCNA_02757	0.15	-1.0
2,921,135	-		CCNA_02757	0.21	-0.4
2,921,135	-		CCNA_02757	0.21	+1.0
2,921,135	-		CCNA_02757	0.21	-0.6
2,921,173	-		CCNA_02757	0.26	+0.6
2,921,174	+		CCNA_02757	0.26	-0.7
2,921,174	+		CCNA_02757	0.26	-1.7
2,921,174	+		CCNA_02757	0.26	+0.8
2,921,174	+		CCNA_02757	0.26	+0.7
2,921,174	+		CCNA_02757	0.26	-0.4
2,921,174	+		CCNA_02757	0.26	-0.5
2,921,174	+		CCNA_02757	0.26	-0.1
2,921,174	+		CCNA_02757	0.26	+0.3
2,921,174	+		CCNA_02757	0.26	+0.3
2,921,174	+		CCNA_02757	0.26	+1.4
2,921,174	+		CCNA_02757	0.26	-0.2
2,921,174	+		CCNA_02757	0.26	+0.8
2,921,174	+		CCNA_02757	0.26	-0.7
2,921,174	+		CCNA_02757	0.26	-0.0
2,921,182	-		CCNA_02757	0.27	-0.3
2,921,182	-		CCNA_02757	0.27	+1.6
2,921,182	-		CCNA_02757	0.27	-1.5
2,921,182	-		CCNA_02757	0.27	+1.5
2,921,182	-		CCNA_02757	0.27	-0.6
2,921,182	-		CCNA_02757	0.27	+0.1
2,921,182	-		CCNA_02757	0.27	-0.9
2,921,182	-		CCNA_02757	0.27	+0.9
2,921,182	-		CCNA_02757	0.27	+0.8
2,921,182	-		CCNA_02757	0.27	-0.5
2,921,182	-		CCNA_02757	0.27	+1.0
2,921,182	-		CCNA_02757	0.27	+0.8
2,921,182	-		CCNA_02757	0.27	-0.5
2,921,182	-		CCNA_02757	0.27	+0.3
2,921,182	-		CCNA_02757	0.27	+0.0
2,921,182	-		CCNA_02757	0.27	-0.6
2,921,182	-		CCNA_02757	0.27	-0.2
2,921,182	-		CCNA_02757	0.27	+0.3
2,921,182	-		CCNA_02757	0.27	+0.0
2,921,182	-		CCNA_02757	0.27	-1.3
2,921,182	-		CCNA_02757	0.27	-1.2
2,921,182	-		CCNA_02757	0.27	-1.0
2,921,186	+		CCNA_02757	0.28	-0.2
2,921,186	+		CCNA_02757	0.28	-0.2
2,921,190	-		CCNA_02757	0.28	-0.5
2,921,221	-		CCNA_02757	0.33	+0.2
2,921,221	-		CCNA_02757	0.33	+0.5
2,921,221	-		CCNA_02757	0.33	+0.3
2,921,221	-		CCNA_02757	0.33	+0.2
2,921,224	+		CCNA_02757	0.33	+0.4
2,921,227	-		CCNA_02757	0.33	+0.4
2,921,275	+		CCNA_02757	0.40	-0.7
2,921,275	+				+0.4
2,921,300	+		CCNA_02757	0.44	+0.5
2,921,308	-		CCNA_02757	0.45	-1.7
2,921,308	-		CCNA_02757	0.45	+0.6
2,921,313	+		CCNA_02757	0.45	+0.4
2,921,341	+		CCNA_02757	0.49	-1.3
2,921,385	-		CCNA_02757	0.55	+1.0
2,921,410	+		CCNA_02757	0.59	+1.3
2,921,410	+		CCNA_02757	0.59	-0.4
2,921,418	-		CCNA_02757	0.60	-1.3
2,921,418	-		CCNA_02757	0.60	+0.1
2,921,435	+		CCNA_02757	0.62	+1.8
2,921,447	+		CCNA_02757	0.64	-1.0
2,921,454	+		CCNA_02757	0.65	-1.3
2,921,462	-		CCNA_02757	0.66	-0.7
2,921,479	-		CCNA_02757	0.68	-1.6
2,921,483	+		CCNA_02757	0.69	-1.3
2,921,483	+		CCNA_02757	0.69	+0.7
2,921,515	+		CCNA_02757	0.73	-0.2
2,921,567	-		CCNA_02757	0.81	-0.5
2,921,584	+		CCNA_02757	0.83	-0.8
2,921,605	-		CCNA_02757	0.86	+3.4
2,921,607	+		CCNA_02757	0.86	-0.4
2,921,608	+		CCNA_02757	0.86	-0.3
2,921,611	-		CCNA_02757	0.87	-1.7
2,921,621	+		CCNA_02757	0.88	+1.9
2,921,621	+		CCNA_02757	0.88	-1.0
2,921,621	+		CCNA_02757	0.88	-3.1
2,921,624	-		CCNA_02757	0.89	-2.3
2,921,629	-		CCNA_02757	0.89	+0.8
2,921,629	-		CCNA_02757	0.89	+0.8
2,921,642	+				+1.4
2,921,725	+				+0.0
2,921,733	-				+0.8
2,921,796	+				+0.4
2,921,796	+				-0.1
2,921,804	-		CCNA_02758	0.11	+2.4
2,921,827	+		CCNA_02758	0.16	+0.5