Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02680

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,831,835	+				+2.4
2,831,841	-				-0.7
2,831,843	-				-0.6
2,831,846	-				-1.3
2,831,863	-				-0.3
2,831,947	-		CCNA_02679	0.14	-2.8
2,831,947	-		CCNA_02679	0.14	-1.5
2,831,956	+		CCNA_02679	0.16	+2.4
2,831,959	-		CCNA_02679	0.16	-2.7
2,831,964	-		CCNA_02679	0.17	-1.6
2,832,123	-		CCNA_02679	0.38	-1.4
2,832,128	-		CCNA_02679	0.39	-0.8
2,832,186	-		CCNA_02679	0.46	-4.2
2,832,191	-		CCNA_02679	0.47	-2.8
2,832,204	-		CCNA_02679	0.49	-0.9
2,832,270	-		CCNA_02679	0.57	+1.1
2,832,291	+		CCNA_02679	0.60	+2.4
2,832,365	+		CCNA_02679	0.70	+2.4
2,832,378	-		CCNA_02679	0.72	-0.2
2,832,469	-		CCNA_02679	0.84	-1.4
2,832,524	-				-1.2
2,832,534	-				-2.9
2,832,557	+				-0.4
2,832,560	-				-2.7
2,832,560	-				-0.2
2,832,653	-				+0.7
2,832,717	+				+1.4
2,832,724	-				+0.4
2,832,737	-				-0.3
2,832,737	-				-0.3
2,832,737	-				-0.4
2,832,746	-				-0.8
2,832,748	-				-0.1
2,832,769	-				-0.9
2,832,779	-				-0.7
2,832,809	+				+1.4
2,832,817	-				-2.4
2,832,817	-				-0.1
2,832,817	-				-0.9
2,832,817	-				-1.0
2,832,817	-				-2.4
2,832,817	-				-0.4
2,832,817	-				-2.0
2,832,817	-				-1.5
2,832,840	+		CCNA_02680	0.10	-1.4
2,832,851	+		CCNA_02680	0.12	+2.4
2,832,867	+		CCNA_02680	0.13	-0.2
2,832,871	+		CCNA_02680	0.14	-0.6
2,832,871	+		CCNA_02680	0.14	-1.4
2,832,879	-		CCNA_02680	0.15	+0.1
2,832,879	-		CCNA_02680	0.15	-0.9
2,832,879	-		CCNA_02680	0.15	-2.0
2,832,897	+		CCNA_02680	0.17	+0.1
2,832,905	-		CCNA_02680	0.17	-1.6
2,832,905	-		CCNA_02680	0.17	-1.6
2,832,971	-		CCNA_02680	0.24	-1.5
2,833,036	+		CCNA_02680	0.31	+0.4
2,833,036	+		CCNA_02680	0.31	+2.4
2,833,036	+		CCNA_02680	0.31	+0.8
2,833,044	-		CCNA_02680	0.32	-1.4
2,833,044	-		CCNA_02680	0.32	-2.8
2,833,044	-		CCNA_02680	0.32	-2.3
2,833,044	-		CCNA_02680	0.32	-2.1
2,833,051	-		CCNA_02680	0.33	-1.4
2,833,051	-		CCNA_02680	0.33	-1.6
2,833,086	+		CCNA_02680	0.37	-1.2
2,833,093	+		CCNA_02680	0.37	-0.6
2,833,101	-		CCNA_02680	0.38	-0.8
2,833,101	-		CCNA_02680	0.38	-0.0
2,833,106	+		CCNA_02680	0.39	+0.8
2,833,106	+		CCNA_02680	0.39	+0.1
2,833,120	-		CCNA_02680	0.40	-0.6
2,833,122	+		CCNA_02680	0.40	+0.1
2,833,127	+		CCNA_02680	0.41	+1.4
2,833,130	-		CCNA_02680	0.41	-1.1
2,833,132	+		CCNA_02680	0.42	+2.4
2,833,140	-		CCNA_02680	0.42	-1.7
2,833,145	-		CCNA_02680	0.43	+0.1
2,833,162	+		CCNA_02680	0.45	-1.0
2,833,162	+		CCNA_02680	0.45	+1.4
2,833,162	+		CCNA_02680	0.45	+2.4
2,833,162	+		CCNA_02680	0.45	-0.9
2,833,162	+		CCNA_02680	0.45	-1.1
2,833,162	+		CCNA_02680	0.45	+0.8
2,833,162	+		CCNA_02680	0.45	-1.2
2,833,162	+		CCNA_02680	0.45	-1.1
2,833,170	-		CCNA_02680	0.46	+0.1
2,833,170	-		CCNA_02680	0.46	-1.7
2,833,170	-		CCNA_02680	0.46	-0.6
2,833,170	-		CCNA_02680	0.46	-0.4
2,833,170	-		CCNA_02680	0.46	-1.4
2,833,170	-		CCNA_02680	0.46	-0.6
2,833,232	+		CCNA_02680	0.52	+0.8
2,833,267	+		CCNA_02680	0.56	-1.7
2,833,275	-		CCNA_02680	0.57	-0.6
2,833,286	+		CCNA_02680	0.58	-1.1
2,833,286	+		CCNA_02680	0.58	+0.3
2,833,291	+		CCNA_02680	0.58	-0.4
2,833,294	-		CCNA_02680	0.59	+0.1
2,833,294	-		CCNA_02680	0.59	-2.0
2,833,297	-		CCNA_02680	0.59	-0.2
2,833,308	-		CCNA_02680	0.60	-0.4
2,833,357	+		CCNA_02680	0.65	-0.9
2,833,357	+		CCNA_02680	0.65	-0.5
2,833,365	-		CCNA_02680	0.66	+1.1
2,833,365	-		CCNA_02680	0.66	+0.4
2,833,365	-		CCNA_02680	0.66	-1.9
2,833,398	+		CCNA_02680	0.70	+1.4
2,833,406	-		CCNA_02680	0.71	-3.0
2,833,406	-		CCNA_02680	0.71	-1.2
2,833,476	+		CCNA_02680	0.78	-0.8
2,833,484	-		CCNA_02680	0.79	-2.5
2,833,489	-		CCNA_02680	0.80	-2.1
2,833,497	+		CCNA_02680	0.80	+0.1
2,833,505	+		CCNA_02680	0.81	-1.4
2,833,563	-		CCNA_02680	0.87	-1.6
2,833,594	-				-0.8
2,833,594	-				-1.5
2,833,594	-				-1.3
2,833,594	-				+0.1
2,833,598	+				+0.8
2,833,611	-				-0.7
2,833,717	+				-1.3
2,833,720	-				+0.0
2,833,725	-				+1.4
2,833,725	-				+0.4
2,833,725	-				+0.2
2,833,725	-				-0.2
2,833,730	+				+0.4
2,833,762	+				+0.2
2,833,772	-				-0.1
2,833,788	+				+0.1
2,833,806	+				-1.1
2,833,814	-				+0.8
2,833,814	-				-1.8
2,833,814	-				+1.4
2,833,857	+				-0.4
2,833,857	+				-0.7
2,833,865	-				-0.8
2,833,865	-				-0.4
2,833,900	-				-0.3
2,833,917	+				+1.1
2,833,917	+				-0.4
2,833,925	-		CCNA_02681	0.10	-1.2
2,833,963	+		CCNA_02681	0.13	-0.5
2,833,994	+		CCNA_02681	0.15	-2.3
2,833,994	+				-2.1
2,833,994	+		CCNA_02681	0.15	+0.5
2,833,994	+		CCNA_02681	0.15	-0.3
2,834,002	-		CCNA_02681	0.16	+0.1
2,834,002	-		CCNA_02681	0.16	-0.1
2,834,007	+		CCNA_02681	0.16	-1.2
2,834,054	-		CCNA_02681	0.19	+1.8
2,834,066	+		CCNA_02681	0.20	-0.5
2,834,066	+		CCNA_02681	0.20	-0.7
2,834,069	-		CCNA_02681	0.20	+0.4
2,834,161	-		CCNA_02681	0.27	+0.6
2,834,161	-		CCNA_02681	0.27	-0.4
2,834,161	-		CCNA_02681	0.27	-0.1
2,834,161	-		CCNA_02681	0.27	+1.4
2,834,161	-		CCNA_02681	0.27	-0.8
2,834,181	+		CCNA_02681	0.28	-0.4
2,834,207	+		CCNA_02681	0.30	-0.3
2,834,257	+		CCNA_02681	0.34	-0.1
2,834,261	+		CCNA_02681	0.34	-0.3
2,834,271	+		CCNA_02681	0.35	-0.0
2,834,271	+		CCNA_02681	0.35	+0.1
2,834,271	+		CCNA_02681	0.35	-2.7
2,834,354	-		CCNA_02681	0.40	-1.7
2,834,412	+		CCNA_02681	0.44	-1.8
2,834,420	-		CCNA_02681	0.45	-0.8
2,834,439	-		CCNA_02681	0.46	-0.2
2,834,444	-		CCNA_02681	0.47	-1.2
2,834,565	-		CCNA_02681	0.55	+0.8
2,834,579	+		CCNA_02681	0.56	-0.6
2,834,592	+		CCNA_02681	0.57	+0.4
2,834,595	-		CCNA_02681	0.57	+2.4
2,834,600	-		CCNA_02681	0.58	+0.1
2,834,618	+		CCNA_02681	0.59	-1.1
2,834,618	+		CCNA_02681	0.59	-0.4
2,834,618	+		CCNA_02681	0.59	-0.3
2,834,626	-		CCNA_02681	0.59	+0.8
2,834,626	-		CCNA_02681	0.59	+2.4
2,834,632	-		CCNA_02681	0.60	-0.9
2,834,632	-		CCNA_02681	0.60	-2.4
2,834,646	+		CCNA_02681	0.61	-1.1
2,834,666	-		CCNA_02681	0.62	-0.2
2,834,666	-		CCNA_02681	0.62	-0.2
2,834,678	-		CCNA_02681	0.63	-0.4