Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02460

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,602,259	-		CCNA_02459	0.56	-2.0
2,602,264	+		CCNA_02459	0.56	-4.0
2,602,264	+		CCNA_02459	0.56	-3.4
2,602,299	-		CCNA_02459	0.57	+0.8
2,602,299	-		CCNA_02459	0.57	-0.2
2,602,310	-		CCNA_02459	0.58	-1.2
2,602,310	-		CCNA_02459	0.58	-0.6
2,602,311	+		CCNA_02459	0.58	-3.7
2,602,318	+		CCNA_02459	0.58	-2.7
2,602,318	+		CCNA_02459	0.58	-3.2
2,602,319	-		CCNA_02459	0.58	-1.1
2,602,319	-		CCNA_02459	0.58	-0.9
2,602,338	+		CCNA_02459	0.59	-1.9
2,602,340	-		CCNA_02459	0.59	-1.7
2,602,348	-		CCNA_02459	0.60	-1.2
2,602,353	-				-0.2
2,602,353	-		CCNA_02459	0.60	+0.4
2,602,356	+		CCNA_02459	0.60	-2.8
2,602,364	-		CCNA_02459	0.60	-0.9
2,602,399	-		CCNA_02459	0.62	+0.1
2,602,403	-		CCNA_02459	0.62	+0.1
2,602,407	-		CCNA_02459	0.62	-2.2
2,602,409	+		CCNA_02459	0.63	-4.0
2,602,416	+		CCNA_02459	0.63	-3.6
2,602,416	+		CCNA_02459	0.63	-3.2
2,602,424	-		CCNA_02459	0.63	-3.9
2,602,424	-		CCNA_02459	0.63	-0.2
2,602,440	+		CCNA_02459	0.64	-0.5
2,602,440	+		CCNA_02459	0.64	-3.4
2,602,448	-		CCNA_02459	0.64	-2.3
2,602,453	-		CCNA_02459	0.65	-0.8
2,602,479	-		CCNA_02459	0.66	-2.8
2,602,479	-		CCNA_02459	0.66	-2.1
2,602,527	+		CCNA_02459	0.68	-2.8
2,602,527	+		CCNA_02459	0.68	-2.4
2,602,527	+		CCNA_02459	0.68	-1.4
2,602,527	+		CCNA_02459	0.68	-2.5
2,602,535	-		CCNA_02459	0.68	+0.8
2,602,565	+		CCNA_02459	0.70	-4.2
2,602,576	+		CCNA_02459	0.70	-1.8
2,602,611	+		CCNA_02459	0.72	-4.4
2,602,678	+		CCNA_02459	0.75	-2.7
2,602,701	+		CCNA_02459	0.76	-3.1
2,602,732	-		CCNA_02459	0.78	+0.8
2,602,732	-		CCNA_02459	0.78	-0.6
2,602,767	+		CCNA_02459	0.79	-5.4
2,602,767	+		CCNA_02459	0.79	-2.1
2,602,767	+		CCNA_02459	0.79	+0.1
2,602,767	+		CCNA_02459	0.79	-2.6
2,602,767	+		CCNA_02459	0.79	-2.3
2,602,767	+		CCNA_02459	0.79	-1.2
2,602,769	-		CCNA_02459	0.79	-1.4
2,602,769	-		CCNA_02459	0.79	-4.6
2,602,774	+		CCNA_02459	0.80	-2.1
2,602,775	-		CCNA_02459	0.80	-2.1
2,602,775	-		CCNA_02459	0.80	+1.4
2,602,775	-		CCNA_02459	0.80	-0.8
2,602,799	-		CCNA_02459	0.81	+0.8
2,602,831	+		CCNA_02459	0.82	-1.2
2,602,831	+		CCNA_02459	0.82	-2.7
2,602,839	-		CCNA_02459	0.83	+1.4
2,602,840	+		CCNA_02459	0.83	-3.8
2,602,848	-		CCNA_02459	0.83	+0.4
2,602,861	+		CCNA_02459	0.84	-2.2
2,602,875	-		CCNA_02459	0.84	+0.8
2,602,914	+		CCNA_02459	0.86	-3.3
2,602,914	+		CCNA_02459	0.86	-2.5
2,602,922	-		CCNA_02459	0.86	-1.1
2,602,922	-		CCNA_02459	0.86	-2.2
2,602,956	-		CCNA_02459	0.88	-1.9
2,602,996	+		CCNA_02459	0.90	-3.4
2,603,002	+				-4.1
2,603,005	-				+0.4
2,603,009	-				-1.1
2,603,038	-				+1.4
2,603,060	-				+2.4
2,603,062	+				-0.4
2,603,062	+				-2.9
2,603,070	-				-1.2
2,603,084	-				+0.8
2,603,091	+				-2.9
2,603,091	+				-3.2
2,603,091	-				-3.0
2,603,091	-				-0.2
2,603,098	+				-2.6
2,603,099	-				-1.5
2,603,142	+				+0.1
2,603,176	+				-4.1
2,603,195	+				-0.6
2,603,200	+				-5.4
2,603,201	-				-1.9
2,603,201	-				-2.8
2,603,201	-				-3.0
2,603,203	-				-1.0
2,603,205	+				+0.2
2,603,205	+				-1.2
2,603,213	-				-0.7
2,603,213	-				+1.6
2,603,240	+				-1.4
2,603,257	+		CCNA_02460	0.11	-0.6
2,603,295	+		CCNA_02460	0.19	-0.1
2,603,375	+		CCNA_02460	0.36	+1.4
2,603,391	-		CCNA_02460	0.40	-0.1
2,603,393	+		CCNA_02460	0.40	+0.1
2,603,393	+		CCNA_02460	0.40	-1.1
2,603,401	-		CCNA_02460	0.42	-0.3
2,603,416	+		CCNA_02460	0.45	-0.4
2,603,416	+		CCNA_02460	0.45	-0.9
2,603,416	+		CCNA_02460	0.45	+0.4
2,603,421	+		CCNA_02460	0.46	-0.2
2,603,421	+		CCNA_02460	0.46	-2.1
2,603,424	-		CCNA_02460	0.47	+0.6
2,603,424	-		CCNA_02460	0.47	+0.1
2,603,437	+		CCNA_02460	0.50	+0.6
2,603,447	+		CCNA_02460	0.52	+1.4
2,603,479	+		CCNA_02460	0.59	-1.3
2,603,481	+		CCNA_02460	0.59	+0.5
2,603,487	-		CCNA_02460	0.60	-0.0
2,603,520	+		CCNA_02460	0.68	-0.6
2,603,539	+		CCNA_02460	0.72	-1.1
2,603,548	-		CCNA_02460	0.74	-0.0
2,603,548	-		CCNA_02460	0.74	-0.0
2,603,549	+		CCNA_02460	0.74	-1.2
2,603,557	-		CCNA_02460	0.76	+0.2
2,603,557	-		CCNA_02460	0.76	+0.0
2,603,559	-		CCNA_02460	0.76	+0.7
2,603,575	-		CCNA_02460	0.79	+0.4
2,603,577	+		CCNA_02460	0.80	+0.4
2,603,590	-		CCNA_02460	0.83	-0.2
2,603,613	-		CCNA_02460	0.88	+0.0
2,603,673	-				+0.5
2,603,675	+				+0.1
2,603,675	+				-2.0
2,603,683	-				+0.3
2,603,683	-				-0.5
2,603,683	-				-0.0
2,603,683	-				-1.2
2,603,754	+		CCNA_02461	0.10	-0.8
2,603,755	-		CCNA_02461	0.11	+0.2
2,603,755	-		CCNA_02461	0.11	+0.7
2,603,770	-		CCNA_02461	0.14	+0.3
2,603,770	-		CCNA_02461	0.14	+0.3
2,603,790	-		CCNA_02461	0.18	+0.6
2,603,836	+		CCNA_02461	0.28	+0.6
2,603,905	-		CCNA_02461	0.43	-0.4
2,603,935	+		CCNA_02461	0.49	-1.1
2,603,935	-		CCNA_02461	0.49	+0.8
2,603,940	+		CCNA_02461	0.50	+0.4
2,603,948	-		CCNA_02461	0.52	+0.7
2,603,948	-		CCNA_02461	0.52	+0.7
2,603,973	-		CCNA_02461	0.57	+0.6
2,603,990	+		CCNA_02461	0.61	+0.8
2,603,994	-		CCNA_02461	0.62	+0.7
2,604,005	+		CCNA_02461	0.64	-0.4
2,604,013	-		CCNA_02461	0.66	-0.7
2,604,026	-		CCNA_02461	0.69	-0.3
2,604,062	-		CCNA_02461	0.77	+1.6
2,604,065	+		CCNA_02461	0.77	+2.2
2,604,073	-		CCNA_02461	0.79	+0.6
2,604,073	-		CCNA_02461	0.79	-0.4
2,604,114	+		CCNA_02461	0.88	+0.8
2,604,122	-		CCNA_02461	0.89	+0.5
2,604,173	-				-4.0
2,604,185	+				+0.8
2,604,224	-				+0.4
2,604,287	+				-1.5
2,604,288	+				+0.8
2,604,324	+				+0.4
2,604,359	+				-0.0
2,604,359	+				+0.6
2,604,367	-				-1.1
2,604,372	-				-0.3
2,604,391	-		CCNA_02462	0.12	-1.7
2,604,393	+		CCNA_02462	0.12	-0.7
2,604,409	-		CCNA_02462	0.17	-2.1
2,604,424	+		CCNA_02462	0.22	-0.7
2,604,458	+		CCNA_02462	0.33	+0.0
2,604,507	-		CCNA_02462	0.48	-0.2
2,604,510	+		CCNA_02462	0.49	+0.2
2,604,518	-		CCNA_02462	0.52	+1.1
2,604,566	+		CCNA_02462	0.67	+0.2
2,604,566	+		CCNA_02462	0.67	-0.3