Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02368

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,509,420	-				-1.8
2,509,463	+		CCNA_02367	0.14	-3.8
2,509,465	+		CCNA_02367	0.14	-5.2
2,509,607	+		CCNA_02367	0.27	-5.7
2,509,631	-		CCNA_02367	0.29	-0.6
2,509,643	+		CCNA_02367	0.30	-5.1
2,509,712	-		CCNA_02367	0.37	-3.2
2,509,727	+		CCNA_02367	0.38	-3.8
2,509,732	-		CCNA_02367	0.39	+0.1
2,509,732	-		CCNA_02367	0.39	-4.4
2,509,737	+		CCNA_02367	0.39	-3.8
2,509,737	+		CCNA_02367	0.39	-4.0
2,509,761	+		CCNA_02367	0.41	-4.0
2,509,806	+		CCNA_02367	0.45	-5.3
2,509,814	-		CCNA_02367	0.46	-1.7
2,509,818	+		CCNA_02367	0.46	-3.3
2,509,842	+		CCNA_02367	0.49	-1.4
2,509,850	-		CCNA_02367	0.49	-2.4
2,509,872	+		CCNA_02367	0.51	-4.6
2,509,872	-		CCNA_02367	0.51	-1.6
2,509,872	-		CCNA_02367	0.51	-2.0
2,509,960	-		CCNA_02367	0.60	-0.6
2,509,967	+		CCNA_02367	0.60	-3.5
2,509,967	+		CCNA_02367	0.60	-3.0
2,509,967	+		CCNA_02367	0.60	-2.8
2,509,975	-		CCNA_02367	0.61	-1.7
2,510,007	+		CCNA_02367	0.64	-2.6
2,510,014	+		CCNA_02367	0.64	-1.9
2,510,015	+		CCNA_02367	0.65	-2.3
2,510,024	+		CCNA_02367	0.65	-4.9
2,510,050	-		CCNA_02367	0.68	-3.8
2,510,067	+		CCNA_02367	0.69	-3.2
2,510,075	-		CCNA_02367	0.70	-3.2
2,510,095	+		CCNA_02367	0.72	-4.8
2,510,130	-		CCNA_02367	0.75	-5.6
2,510,144	+		CCNA_02367	0.76	-5.0
2,510,152	-		CCNA_02367	0.77	-4.1
2,510,152	-		CCNA_02367	0.77	-4.1
2,510,200	+		CCNA_02367	0.82	-3.4
2,510,206	+		CCNA_02367	0.82	-3.5
2,510,219	-		CCNA_02367	0.83	-4.0
2,510,224	+		CCNA_02367	0.84	-1.4
2,510,236	+		CCNA_02367	0.85	-5.0
2,510,266	-		CCNA_02367	0.88	-3.3
2,510,268	+		CCNA_02367	0.88	-4.9
2,510,278	+		CCNA_02367	0.89	-2.0
2,510,283	+		CCNA_02367	0.89	-5.3
2,510,286	-		CCNA_02367	0.89	-5.0
2,510,325	+				-4.8
2,510,349	+				-2.8
2,510,368	+				-4.6
2,510,395	+				-1.1
2,510,395	+				-1.1
2,510,395	+				-0.7
2,510,403	-				-0.1
2,510,403	-				+2.4
2,510,417	+				-0.7
2,510,417	+				-0.1
2,510,453	+				+0.4
2,510,499	-				-2.5
2,510,509	-				-4.0
2,510,526	+				-0.7
2,510,551	-				-2.4
2,510,570	-		CCNA_02368	0.11	-3.7
2,510,620	-		CCNA_02368	0.14	-4.7
2,510,620	-		CCNA_02368	0.14	+0.4
2,510,620	-		CCNA_02368	0.14	-4.3
2,510,636	-		CCNA_02368	0.15	-4.3
2,510,641	-		CCNA_02368	0.15	-6.0
2,510,663	-		CCNA_02368	0.16	-3.3
2,510,675	-		CCNA_02368	0.17	-5.3
2,510,680	-		CCNA_02368	0.17	-3.0
2,510,681	+		CCNA_02368	0.17	+2.4
2,510,733	+		CCNA_02368	0.20	+0.9
2,510,837	-		CCNA_02368	0.27	-4.0
2,510,837	-		CCNA_02368	0.27	-5.3
2,510,838	-		CCNA_02368	0.27	-5.8
2,510,849	-		CCNA_02368	0.27	-4.1
2,510,865	+		CCNA_02368	0.28	+2.4
2,510,865	+		CCNA_02368	0.28	-0.7
2,510,873	-		CCNA_02368	0.29	-2.3
2,510,873	-		CCNA_02368	0.29	-4.9
2,510,874	-		CCNA_02368	0.29	-5.0
2,510,877	+				+2.4
2,510,885	-		CCNA_02368	0.30	-6.1
2,510,885	-		CCNA_02368	0.30	-5.1
2,510,920	+		CCNA_02368	0.32	+2.4
2,510,977	-		CCNA_02368	0.35	-2.1
2,510,977	-		CCNA_02368	0.35	-5.6
2,510,979	+		CCNA_02368	0.35	+2.4
2,511,023	-		CCNA_02368	0.38	-3.0
2,511,024	-		CCNA_02368	0.38	-5.0
2,511,024	-		CCNA_02368	0.38	-5.0
2,511,122	-		CCNA_02368	0.44	-5.2
2,511,134	-		CCNA_02368	0.45	-2.4
2,511,134	-		CCNA_02368	0.45	-3.9
2,511,163	-		CCNA_02368	0.47	-4.1
2,511,163	-		CCNA_02368	0.47	-3.8
2,511,189	-		CCNA_02368	0.48	-3.1
2,511,347	+		CCNA_02368	0.58	+0.4
2,511,347	+		CCNA_02368	0.58	+2.4
2,511,352	+		CCNA_02368	0.58	+0.9
2,511,355	-		CCNA_02368	0.58	-2.9
2,511,355	-		CCNA_02368	0.58	-4.0
2,511,355	-		CCNA_02368	0.58	-3.1
2,511,355	-		CCNA_02368	0.58	-3.8
2,511,355	-		CCNA_02368	0.58	-4.9
2,511,355	-		CCNA_02368	0.58	-2.3
2,511,355	-		CCNA_02368	0.58	-2.2
2,511,362	-		CCNA_02368	0.59	-4.2
2,511,362	-		CCNA_02368	0.59	-3.1
2,511,393	+		CCNA_02368	0.61	+0.9
2,511,409	+		CCNA_02368	0.62	-2.2
2,511,409	+		CCNA_02368	0.62	-3.1
2,511,417	-		CCNA_02368	0.62	-3.6
2,511,417	-		CCNA_02368	0.62	-5.1
2,511,459	-		CCNA_02368	0.65	-2.9
2,511,496	+		CCNA_02368	0.67	+0.9
2,511,504	-		CCNA_02368	0.67	-4.6
2,511,520	+		CCNA_02368	0.68	-2.6
2,511,520	+		CCNA_02368	0.68	+2.4
2,511,543	-		CCNA_02368	0.70	-4.1
2,511,546	-		CCNA_02368	0.70	-3.9
2,511,548	-		CCNA_02368	0.70	-2.4
2,511,600	-		CCNA_02368	0.73	-4.0
2,511,600	-		CCNA_02368	0.73	-3.5
2,511,611	-		CCNA_02368	0.74	-3.6
2,511,646	+		CCNA_02368	0.76	-2.0
2,511,654	+		CCNA_02368	0.76	+1.4
2,511,654	-		CCNA_02368	0.76	-3.1
2,511,659	+		CCNA_02368	0.77	+2.4
2,511,659	+		CCNA_02368	0.77	+0.9
2,511,667	+		CCNA_02368	0.77	+2.4
2,511,667	-		CCNA_02368	0.77	-5.4
2,511,667	-		CCNA_02368	0.77	-2.4
2,511,667	-		CCNA_02368	0.77	-2.7
2,511,710	-		CCNA_02368	0.80	-3.4
2,511,777	-		CCNA_02368	0.84	-1.9
2,511,785	-		CCNA_02368	0.84	-5.6
2,511,880	-				-4.8
2,511,939	-				-4.4
2,512,120	-				+3.0
2,512,120	-				-2.2
2,512,139	+				-0.4
2,512,154	-				-1.0
2,512,181	+				+1.1
2,512,211	-		CCNA_02369	0.11	-1.7
2,512,226	+		CCNA_02369	0.12	-1.0
2,512,247	-		CCNA_02369	0.13	+0.5
2,512,247	-		CCNA_02369	0.13	+0.1
2,512,257	+		CCNA_02369	0.13	-0.2
2,512,377	+		CCNA_02369	0.20	-0.3
2,512,423	-		CCNA_02369	0.22	-0.7
2,512,474	-		CCNA_02369	0.25	-0.0
2,512,474	-		CCNA_02369	0.25	-0.7
2,512,521	+		CCNA_02369	0.28	-1.8
2,512,529	-		CCNA_02369	0.28	+0.4
2,512,534	-		CCNA_02369	0.29	+1.4
2,512,666	-		CCNA_02369	0.36	-1.3
2,512,701	+		CCNA_02369	0.38	-0.4
2,512,701	+		CCNA_02369	0.38	-1.7
2,512,704	-		CCNA_02369	0.38	+0.4
2,512,709	-		CCNA_02369	0.38	-0.3
2,512,709	-		CCNA_02369	0.38	+1.1
2,512,725	-		CCNA_02369	0.39	-0.6
2,512,751	+		CCNA_02369	0.40	+2.4
2,512,751	+		CCNA_02369	0.40	+0.9
2,512,759	-		CCNA_02369	0.41	-0.0
2,512,759	-		CCNA_02369	0.41	+1.0
2,512,785	-		CCNA_02369	0.42	+0.1
2,512,811	+		CCNA_02369	0.44	-0.1
2,512,830	-		CCNA_02369	0.45	-1.4
2,512,848	+		CCNA_02369	0.46	+2.4
2,512,848	+		CCNA_02369	0.46	+1.4
2,512,848	+		CCNA_02369	0.46	+0.4
2,512,848	+		CCNA_02369	0.46	+0.9
2,512,848	+		CCNA_02369	0.46	+2.4
2,512,848	+		CCNA_02369	0.46	+0.9
2,512,848	+		CCNA_02369	0.46	+0.9
2,512,856	-		CCNA_02369	0.46	-1.7
2,512,862	-		CCNA_02369	0.47	+0.9
2,512,887	-		CCNA_02369	0.48	+0.9
2,512,949	+		CCNA_02369	0.51	+0.4
2,512,949	-		CCNA_02369	0.51	-1.0
2,512,951	+		CCNA_02369	0.52	+1.1
2,512,973	-		CCNA_02369	0.53	-0.1
2,512,990	-		CCNA_02369	0.54	+1.6