Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02261

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,410,487	-		CCNA_02259	0.59	+0.6
2,410,487	-		CCNA_02259	0.59	+0.1
2,410,487	-		CCNA_02259	0.59	-0.0
2,410,487	-		CCNA_02259	0.59	+0.4
2,410,487	-		CCNA_02259	0.59	-0.1
2,410,487	-		CCNA_02259	0.59	-0.5
2,410,805	-				-0.2
2,410,805	-				+0.4
2,410,826	-				-0.5
2,410,827	-				+0.3
2,410,867	-				+1.2
2,410,882	+				-1.7
2,410,882	+				+1.0
2,410,890	-				+1.1
2,410,890	-				+0.5
2,410,890	-				+1.4
2,410,890	-				+0.8
2,410,898	+				+1.1
2,410,948	+				-0.5
2,410,949	+				+1.6
2,410,991	+		CCNA_02260	0.16	-1.7
2,411,046	+		CCNA_02260	0.30	-0.2
2,411,068	-		CCNA_02260	0.35	-1.4
2,411,097	+		CCNA_02260	0.42	-1.3
2,411,128	+		CCNA_02260	0.50	-0.5
2,411,138	+		CCNA_02260	0.52	-3.1
2,411,183	+		CCNA_02260	0.63	-1.5
2,411,201	-		CCNA_02260	0.68	-1.2
2,411,338	-				+0.7
2,411,367	+				-0.7
2,411,375	-				+0.5
2,411,375	-				+0.6
2,411,375	-				-0.3
2,411,375	-				+0.4
2,411,375	-				+0.1
2,411,431	+				+1.4
2,411,440	-				-4.1
2,411,475	+				-7.7
2,411,480	+				+0.0
2,411,480	+				-1.3
2,411,516	-				-2.2
2,411,620	+		CCNA_02261	0.10	-1.1
2,411,620	+		CCNA_02261	0.10	+2.4
2,411,628	-		CCNA_02261	0.11	-4.6
2,411,628	-		CCNA_02261	0.11	-3.8
2,411,628	-		CCNA_02261	0.11	-4.6
2,411,628	-		CCNA_02261	0.11	-4.2
2,411,628	-		CCNA_02261	0.11	-4.1
2,411,690	-		CCNA_02261	0.14	-2.4
2,411,690	-		CCNA_02261	0.14	-4.1
2,411,699	+		CCNA_02261	0.14	+1.4
2,411,699	+		CCNA_02261	0.14	-0.2
2,411,707	-		CCNA_02261	0.15	-5.8
2,411,746	-		CCNA_02261	0.17	-4.0
2,411,757	+		CCNA_02261	0.17	+0.8
2,411,757	+		CCNA_02261	0.17	+1.4
2,411,781	+		CCNA_02261	0.18	+2.4
2,411,781	+		CCNA_02261	0.18	+1.4
2,411,781	+		CCNA_02261	0.18	+2.4
2,411,781	+		CCNA_02261	0.18	+2.4
2,411,781	+		CCNA_02261	0.18	+2.4
2,411,781	+		CCNA_02261	0.18	+2.4
2,411,781	+		CCNA_02261	0.18	-2.6
2,411,789	-		CCNA_02261	0.19	-5.2
2,411,789	-		CCNA_02261	0.19	-3.8
2,411,789	-		CCNA_02261	0.19	-4.4
2,411,789	-		CCNA_02261	0.19	-5.9
2,411,789	-		CCNA_02261	0.19	-4.9
2,411,789	-		CCNA_02261	0.19	-5.2
2,411,789	-		CCNA_02261	0.19	-2.6
2,411,789	-		CCNA_02261	0.19	-5.5
2,411,789	-		CCNA_02261	0.19	-4.4
2,411,789	-		CCNA_02261	0.19	-3.8
2,411,811	-		CCNA_02261	0.20	-2.8
2,411,860	+		CCNA_02261	0.22	+1.4
2,411,865	+		CCNA_02261	0.22	+2.4
2,411,883	+		CCNA_02261	0.23	+2.4
2,411,917	+		CCNA_02261	0.25	-0.6
2,411,947	+		CCNA_02261	0.27	+0.4
2,411,971	+		CCNA_02261	0.28	+0.4
2,411,976	+		CCNA_02261	0.28	+0.0
2,411,984	-		CCNA_02261	0.28	-4.5
2,411,995	-		CCNA_02261	0.29	-4.0
2,412,007	-		CCNA_02261	0.30	-4.3
2,412,064	+		CCNA_02261	0.32	+1.4
2,412,147	-		CCNA_02261	0.36	-3.3
2,412,148	+		CCNA_02261	0.37	+1.4
2,412,151	-		CCNA_02261	0.37	-3.7
2,412,151	-		CCNA_02261	0.37	-2.1
2,412,190	+		CCNA_02261	0.39	+2.4
2,412,233	-		CCNA_02261	0.41	-3.4
2,412,309	-		CCNA_02261	0.45	-5.1
2,412,309	-		CCNA_02261	0.45	-5.1
2,412,309	-		CCNA_02261	0.45	-2.9
2,412,325	+		CCNA_02261	0.45	+2.4
2,412,410	-		CCNA_02261	0.50	-4.4
2,412,436	-		CCNA_02261	0.51	-4.1
2,412,442	+		CCNA_02261	0.51	-3.3
2,412,443	-		CCNA_02261	0.51	-3.3
2,412,478	-		CCNA_02261	0.53	-4.5
2,412,478	-		CCNA_02261	0.53	-3.9
2,412,504	-		CCNA_02261	0.54	-2.6
2,412,577	-		CCNA_02261	0.58	-1.6
2,412,581	+		CCNA_02261	0.58	+1.4
2,412,584	-		CCNA_02261	0.58	-2.5
2,412,588	-		CCNA_02261	0.58	-4.6
2,412,604	-		CCNA_02261	0.59	-4.3
2,412,630	+		CCNA_02261	0.60	+2.4
2,412,630	+		CCNA_02261	0.60	+2.4
2,412,630	+		CCNA_02261	0.60	+2.4
2,412,631	-		CCNA_02261	0.61	-2.6
2,412,638	-		CCNA_02261	0.61	-4.5
2,412,638	-		CCNA_02261	0.61	-0.5
2,412,638	-		CCNA_02261	0.61	-3.2
2,412,638	-		CCNA_02261	0.61	-4.7
2,412,638	-		CCNA_02261	0.61	-3.1
2,412,638	-		CCNA_02261	0.61	-3.3
2,412,643	-		CCNA_02261	0.61	-2.3
2,412,643	-		CCNA_02261	0.61	-4.3
2,412,705	+		CCNA_02261	0.64	-2.6
2,412,720	-		CCNA_02261	0.65	-4.3
2,412,739	-		CCNA_02261	0.66	-3.0
2,412,762	+		CCNA_02261	0.67	-3.5
2,412,762	+		CCNA_02261	0.67	-2.9
2,412,762	+		CCNA_02261	0.67	-0.2
2,412,762	+		CCNA_02261	0.67	-1.9
2,412,770	-		CCNA_02261	0.67	+0.5
2,412,855	+		CCNA_02261	0.72	+2.4
2,412,862	-		CCNA_02261	0.72	-0.8
2,412,863	-		CCNA_02261	0.72	-1.9
2,412,863	-		CCNA_02261	0.72	-2.7
2,412,876	+		CCNA_02261	0.73	+0.4
2,412,905	+		CCNA_02261	0.74	-1.2
2,412,913	-		CCNA_02261	0.75	-3.6
2,412,913	-		CCNA_02261	0.75	-0.3
2,412,948	+		CCNA_02261	0.76	+1.4
2,412,958	+		CCNA_02261	0.77	+0.8
2,413,045	-		CCNA_02261	0.81	-1.5
2,413,088	+		CCNA_02261	0.83	+2.4
2,413,105	+		CCNA_02261	0.84	+0.4
2,413,105	+		CCNA_02261	0.84	+0.4
2,413,105	+		CCNA_02261	0.84	-1.2
2,413,127	+		CCNA_02261	0.85	+0.8
2,413,128	-		CCNA_02261	0.85	-3.3
2,413,135	-		CCNA_02261	0.86	-5.6
2,413,137	+		CCNA_02261	0.86	+2.4
2,413,142	+		CCNA_02261	0.86	-1.2
2,413,150	-		CCNA_02261	0.86	-2.9
2,413,174	+		CCNA_02261	0.88	-0.2
2,413,242	+				+0.0
2,413,250	-				-2.4
2,413,250	-				-2.2
2,413,274	-				-4.0
2,413,291	-				-4.8
2,413,305	+				+2.4
2,413,305	+				+2.4
2,413,326	+				+1.4
2,413,365	+				+2.4
2,413,390	+				+2.4
2,413,556	-				+0.8
2,413,557	-				+0.0
2,413,616	+				-1.4
2,413,621	+				+0.8
2,413,621	+				+0.9
2,413,623	-				+0.4
2,413,635	+				+0.8
2,413,671	+				+0.2
2,413,693	+				+1.4
2,413,751	+				-1.1
2,413,769	-				-0.9
2,413,771	+				-1.7
2,413,779	-				-0.1
2,413,823	+				-0.2
2,413,825	-				-0.6
2,413,831	-				-1.5
2,413,893	+		CCNA_02262	0.11	-2.0
2,413,916	+		CCNA_02262	0.12	-0.2
2,414,022	+		CCNA_02262	0.15	-2.3
2,414,022	+		CCNA_02262	0.15	-0.6
2,414,040	-		CCNA_02262	0.15	+0.2
2,414,047	+		CCNA_02262	0.15	+1.4
2,414,062	+		CCNA_02262	0.16	-2.0
2,414,067	+		CCNA_02262	0.16	+0.9
2,414,070	-		CCNA_02262	0.16	-1.1
2,414,070	-		CCNA_02262	0.16	+1.0
2,414,088	-		CCNA_02262	0.16	+0.0
2,414,095	+				+0.0
2,414,102	+		CCNA_02262	0.17	+2.4
2,414,136	+		CCNA_02262	0.18	+0.8
2,414,144	-		CCNA_02262	0.18	+2.0
2,414,154	-		CCNA_02262	0.18	+0.8
2,414,167	-		CCNA_02262	0.18	+0.4
2,414,187	+		CCNA_02262	0.19	+2.4
2,414,195	-		CCNA_02262	0.19	-0.6
2,414,206	+		CCNA_02262	0.19	-0.9
2,414,214	-		CCNA_02262	0.20	-0.5
2,414,214	-		CCNA_02262	0.20	-1.3
2,414,215	+		CCNA_02262	0.20	+1.0
2,414,291	-		CCNA_02262	0.22	-1.6
2,414,306	+		CCNA_02262	0.22	+0.0
2,414,388	+		CCNA_02262	0.24	+0.2
2,414,388	+		CCNA_02262	0.24	+0.4
2,414,390	-		CCNA_02262	0.24	-0.5
2,414,396	-		CCNA_02262	0.24	+0.5
2,414,396	-		CCNA_02262	0.24	+0.4