Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02172

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,323,938	-		CCNA_02171	0.50	+0.5
2,323,939	+		CCNA_02171	0.50	+0.9
2,323,958	+		CCNA_02171	0.51	+0.5
2,323,963	+		CCNA_02171	0.52	+0.4
2,323,963	+		CCNA_02171	0.52	-2.1
2,323,983	-		CCNA_02171	0.53	+0.8
2,323,988	-		CCNA_02171	0.54	+1.2
2,323,988	-		CCNA_02171	0.54	+1.5
2,323,993	+		CCNA_02171	0.54	-0.2
2,324,016	-		CCNA_02171	0.56	+0.8
2,324,029	-		CCNA_02171	0.57	+0.8
2,324,041	+		CCNA_02171	0.58	+0.4
2,324,044	+		CCNA_02171	0.58	+0.0
2,324,049	-		CCNA_02171	0.58	+0.8
2,324,089	+		CCNA_02171	0.62	-0.1
2,324,104	-		CCNA_02171	0.63	+1.4
2,324,126	+		CCNA_02171	0.64	-0.6
2,324,131	+		CCNA_02171	0.65	+0.0
2,324,179	+		CCNA_02171	0.69	+0.5
2,324,185	+		CCNA_02171	0.69	+1.9
2,324,185	+				+1.4
2,324,188	-		CCNA_02171	0.69	+0.8
2,324,226	-		CCNA_02171	0.72	+2.3
2,324,245	-		CCNA_02171	0.74	+1.2
2,324,252	-		CCNA_02171	0.74	+1.0
2,324,252	-		CCNA_02171	0.74	+1.1
2,324,314	-		CCNA_02171	0.79	+1.1
2,324,314	-		CCNA_02171	0.79	+1.2
2,324,314	-		CCNA_02171	0.79	+1.3
2,324,314	-		CCNA_02171	0.79	+1.1
2,324,314	-		CCNA_02171	0.79	+0.9
2,324,355	-		CCNA_02171	0.82	+0.8
2,324,356	+		CCNA_02171	0.82	-1.5
2,324,356	+		CCNA_02171	0.82	-1.2
2,324,370	-		CCNA_02171	0.84	+1.1
2,324,377	+		CCNA_02171	0.84	-0.3
2,324,385	-		CCNA_02171	0.85	+1.0
2,324,385	-		CCNA_02171	0.85	+1.4
2,324,385	-		CCNA_02171	0.85	+0.8
2,324,414	-		CCNA_02171	0.87	+1.1
2,324,417	+		CCNA_02171	0.87	+0.4
2,324,425	-		CCNA_02171	0.88	+1.4
2,324,446	-		CCNA_02171	0.89	+1.2
2,324,483	+				-0.1
2,324,484	-				+1.2
2,324,496	-				+1.0
2,324,526	+				+1.6
2,324,526	+				-0.4
2,324,526	+				+1.4
2,324,528	+				+0.0
2,324,529	-				+1.2
2,324,534	-				+1.0
2,324,534	-				+0.7
2,324,534	-				+0.9
2,324,534	-				+0.8
2,324,534	-				+0.5
2,324,536	-				+0.8
2,324,539	+				-0.3
2,324,547	-				+1.2
2,324,554	+				-0.0
2,324,554	+				-1.3
2,324,562	-				+0.6
2,324,592	-				+1.4
2,324,624	+				-0.6
2,324,624	+				-1.2
2,324,645	-				-0.2
2,324,649	+				+1.3
2,324,692	-				+1.4
2,324,718	+				-1.0
2,324,718	+				+2.4
2,324,719	-				-0.5
2,324,730	-				+0.0
2,324,785	-				-1.5
2,324,815	+				+1.4
2,324,845	+				-0.9
2,324,853	-				+1.4
2,324,874	+				-1.6
2,324,902	-				+1.0
2,324,950	+				+0.7
2,324,968	+				+1.7
2,324,985	+				+1.5
2,325,012	+		CCNA_02172	0.10	+0.8
2,325,020	-		CCNA_02172	0.11	+0.6
2,325,022	+		CCNA_02172	0.11	+1.7
2,325,079	+		CCNA_02172	0.16	+0.9
2,325,079	+		CCNA_02172	0.16	+2.3
2,325,088	+		CCNA_02172	0.16	+1.0
2,325,089	-		CCNA_02172	0.17	+0.4
2,325,110	+		CCNA_02172	0.18	+1.5
2,325,123	+		CCNA_02172	0.19	+1.5
2,325,123	+		CCNA_02172	0.19	+0.9
2,325,131	-		CCNA_02172	0.20	+2.4
2,325,143	-		CCNA_02172	0.21	+0.6
2,325,157	+		CCNA_02172	0.22	+1.5
2,325,210	+		CCNA_02172	0.27	+1.5
2,325,215	+		CCNA_02172	0.27	+1.7
2,325,218	-		CCNA_02172	0.27	-0.5
2,325,218	-				+0.8
2,325,247	+		CCNA_02172	0.30	+1.5
2,325,255	-		CCNA_02172	0.30	+1.6
2,325,360	+		CCNA_02172	0.39	+1.1
2,325,360	+		CCNA_02172	0.39	+0.2
2,325,362	-		CCNA_02172	0.39	+0.1
2,325,367	+		CCNA_02172	0.40	+0.7
2,325,375	-		CCNA_02172	0.40	-0.6
2,325,378	+		CCNA_02172	0.40	+0.9
2,325,385	-		CCNA_02172	0.41	+0.6
2,325,396	+		CCNA_02172	0.42	+0.6
2,325,402	-		CCNA_02172	0.42	+2.4
2,325,414	-		CCNA_02172	0.43	+1.4
2,325,422	+		CCNA_02172	0.44	+1.4
2,325,441	-		CCNA_02172	0.46	+1.4
2,325,442	+		CCNA_02172	0.46	+1.2
2,325,491	+		CCNA_02172	0.50	+1.4
2,325,501	+		CCNA_02172	0.51	+1.2
2,325,546	+		CCNA_02172	0.54	+1.4
2,325,554	-		CCNA_02172	0.55	+1.2
2,325,590	+		CCNA_02172	0.58	+1.1
2,325,636	+		CCNA_02172	0.62	+1.4
2,325,654	+		CCNA_02172	0.63	+1.7
2,325,679	-		CCNA_02172	0.65	+3.4
2,325,730	+		CCNA_02172	0.70	+1.6
2,325,733	-		CCNA_02172	0.70	+0.2
2,325,765	-		CCNA_02172	0.73	+1.5
2,325,772	+		CCNA_02172	0.73	+1.2
2,325,772	+		CCNA_02172	0.73	+1.4
2,325,780	-		CCNA_02172	0.74	+1.1
2,325,780	-		CCNA_02172	0.74	+0.4
2,325,782	+		CCNA_02172	0.74	+1.2
2,325,782	+		CCNA_02172	0.74	+1.7
2,325,782	+		CCNA_02172	0.74	+1.0
2,325,812	+		CCNA_02172	0.76	+1.2
2,325,814	+		CCNA_02172	0.77	+1.5
2,325,847	-		CCNA_02172	0.79	+1.5
2,325,847	-		CCNA_02172	0.79	+2.1
2,325,864	+		CCNA_02172	0.81	+1.5
2,325,864	+		CCNA_02172	0.81	+2.7
2,325,922	+		CCNA_02172	0.86	+1.7
2,325,930	+		CCNA_02172	0.86	+1.6
2,325,938	-		CCNA_02172	0.87	-0.1
2,325,938	-		CCNA_02172	0.87	+0.8
2,325,977	+				+1.9
2,325,996	-				-0.2
2,326,025	+				+1.3
2,326,032	+				+1.5
2,326,089	+				+0.6
2,326,089	+				+1.3
2,326,089	-				+2.4
2,326,104	-				+1.1
2,326,148	+				+1.2
2,326,157	+				+1.6
2,326,157	+				+1.7
2,326,167	+		CCNA_02173	0.10	+1.7
2,326,187	+		CCNA_02173	0.13	+1.5
2,326,187	+		CCNA_02173	0.13	+0.8
2,326,187	+		CCNA_02173	0.13	+1.8
2,326,187	+		CCNA_02173	0.13	+1.8
2,326,187	+		CCNA_02173	0.13	+1.9
2,326,195	-		CCNA_02173	0.14	+2.4
2,326,195	-		CCNA_02173	0.14	-1.2
2,326,195	-		CCNA_02173	0.14	+1.4
2,326,202	-		CCNA_02173	0.15	-0.9
2,326,229	-		CCNA_02173	0.18	+1.4
2,326,319	-		CCNA_02173	0.30	+2.4
2,326,324	+		CCNA_02173	0.31	+1.9
2,326,410	-		CCNA_02173	0.42	+2.4
2,326,412	+		CCNA_02173	0.43	+1.7
2,326,434	-		CCNA_02173	0.46	+1.1
2,326,439	+		CCNA_02173	0.46	+1.7
2,326,439	+		CCNA_02173	0.46	+0.9
2,326,449	+		CCNA_02173	0.48	+2.2
2,326,465	+		CCNA_02173	0.50	+1.4
2,326,519	+		CCNA_02173	0.57	+1.4
2,326,519	+		CCNA_02173	0.57	+1.6
2,326,519	+		CCNA_02173	0.57	+1.2
2,326,519	+		CCNA_02173	0.57	+1.8
2,326,519	+		CCNA_02173	0.57	+1.4
2,326,519	+		CCNA_02173	0.57	+2.1
2,326,519	+		CCNA_02173	0.57	+1.2
2,326,527	-		CCNA_02173	0.58	+2.1
2,326,527	-		CCNA_02173	0.58	+2.6
2,326,527	-		CCNA_02173	0.58	+1.9
2,326,527	-		CCNA_02173	0.58	+2.1
2,326,527	-		CCNA_02173	0.58	+2.2
2,326,527	-				+2.4
2,326,527	-		CCNA_02173	0.58	+2.1
2,326,527	-		CCNA_02173	0.58	+2.0
2,326,546	+		CCNA_02173	0.61	+1.3
2,326,554	-		CCNA_02173	0.62	+0.3
2,326,581	+		CCNA_02173	0.65	+1.3
2,326,581	+		CCNA_02173	0.65	+2.4
2,326,616	+		CCNA_02173	0.70	+1.8
2,326,692	+		CCNA_02173	0.80	+1.5
2,326,715	+		CCNA_02173	0.83	+1.6
2,326,753	-		CCNA_02173	0.88	-0.2
2,326,814	+				+0.8
2,326,898	+				+1.4
2,326,906	-				-0.2
2,326,928	+				+1.1
2,326,954	-				+0.8
2,327,021	+		CCNA_02174	0.16	+1.4
2,327,026	+		CCNA_02174	0.16	+1.7
2,327,026	+		CCNA_02174	0.16	+1.6
2,327,026	+		CCNA_02174	0.16	+1.7
2,327,026	+		CCNA_02174	0.16	+1.7
2,327,026	+		CCNA_02174	0.16	+1.7
2,327,026	+		CCNA_02174	0.16	+1.7
2,327,026	+		CCNA_02174	0.16	+1.3
2,327,026	+		CCNA_02174	0.16	+1.5
2,327,034	-		CCNA_02174	0.17	+1.2
2,327,034	-		CCNA_02174	0.17	-0.3
2,327,034	-		CCNA_02174	0.17	-0.6
2,327,034	-		CCNA_02174	0.17	+0.2
2,327,034	-		CCNA_02174	0.17	+1.0