Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02087

Experiment: PYE_noCalcium 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 25C survival rep3 12 days
2,236,095	-		CCNA_02086	0.88	+2.4
2,236,119	-				-1.2
2,236,165	+				+1.4
2,236,173	-				+0.2
2,236,190	+				+2.4
2,236,206	-				+1.1
2,236,252	+				+0.3
2,236,257	+				-2.3
2,236,260	-				-2.5
2,236,260	-				-2.6
2,236,260	-				+0.9
2,236,262	+				-0.8
2,236,275	-				+0.0
2,236,286	-				-1.7
2,236,311	+				-0.2
2,236,318	-				-0.8
2,236,353	-				+0.2
2,236,360	+				+2.4
2,236,360	+				+1.4
2,236,368	-				-1.4
2,236,368	-				-0.0
2,236,376	-				-0.3
2,236,381	-				+1.5
2,236,422	-				-4.4
2,236,435	-				-3.8
2,236,438	+				+0.4
2,236,447	+				-2.9
2,236,542	+		CCNA_02087	0.16	-1.6
2,236,550	-		CCNA_02087	0.16	-4.2
2,236,586	+		CCNA_02087	0.19	-0.5
2,236,586	+		CCNA_02087	0.19	-0.8
2,236,594	-		CCNA_02087	0.20	-3.3
2,236,594	-		CCNA_02087	0.20	-4.4
2,236,594	-		CCNA_02087	0.20	-5.1
2,236,594	-		CCNA_02087	0.20	-3.3
2,236,610	+		CCNA_02087	0.21	-1.1
2,236,617	-		CCNA_02087	0.22	-1.5
2,236,651	+		CCNA_02087	0.25	-1.6
2,236,669	-		CCNA_02087	0.26	-3.8
2,236,717	+		CCNA_02087	0.30	-1.5
2,236,717	+		CCNA_02087	0.30	-0.6
2,236,717	+		CCNA_02087	0.30	-1.6
2,236,717	+		CCNA_02087	0.30	-2.0
2,236,722	+		CCNA_02087	0.31	-4.2
2,236,725	-		CCNA_02087	0.31	-3.5
2,236,725	-		CCNA_02087	0.31	-4.3
2,236,725	-		CCNA_02087	0.31	-2.5
2,236,746	+		CCNA_02087	0.33	-4.5
2,236,754	-		CCNA_02087	0.34	-3.1
2,236,754	-		CCNA_02087	0.34	-4.2
2,236,772	+		CCNA_02087	0.35	-1.6
2,236,772	+		CCNA_02087	0.35	-0.2
2,236,772	+		CCNA_02087	0.35	-0.8
2,236,773	-		CCNA_02087	0.35	-2.6
2,236,780	-		CCNA_02087	0.36	-4.4
2,236,780	-		CCNA_02087	0.36	-4.3
2,236,780	-		CCNA_02087	0.36	-5.6
2,236,780	-		CCNA_02087	0.36	-3.5
2,236,780	-		CCNA_02087	0.36	-3.5
2,236,780	-		CCNA_02087	0.36	-4.3
2,236,780	-		CCNA_02087	0.36	-3.9
2,236,782	-		CCNA_02087	0.36	-4.6
2,236,791	-		CCNA_02087	0.37	-3.0
2,236,816	+		CCNA_02087	0.39	-3.0
2,236,830	+		CCNA_02087	0.40	+0.4
2,236,830	+		CCNA_02087	0.40	-1.2
2,236,833	-		CCNA_02087	0.40	-4.8
2,236,838	-		CCNA_02087	0.41	-3.1
2,236,843	-		CCNA_02087	0.41	-1.6
2,236,853	+		CCNA_02087	0.42	+1.4
2,236,861	-		CCNA_02087	0.43	-2.9
2,236,867	-		CCNA_02087	0.43	-4.2
2,236,902	-		CCNA_02087	0.46	-4.9
2,236,938	-		CCNA_02087	0.49	-4.4
2,236,943	+		CCNA_02087	0.49	-1.5
2,236,943	+		CCNA_02087	0.49	-0.3
2,236,950	-		CCNA_02087	0.50	-1.7
2,236,982	-		CCNA_02087	0.53	-4.3
2,236,982	-		CCNA_02087	0.53	-2.2
2,236,982	-		CCNA_02087	0.53	-1.8
2,237,001	-		CCNA_02087	0.54	-5.5
2,237,005	-		CCNA_02087	0.55	-3.4
2,237,028	-		CCNA_02087	0.57	-4.1
2,237,041	-		CCNA_02087	0.58	-4.1
2,237,089	+		CCNA_02087	0.62	-3.0
2,237,092	-		CCNA_02087	0.62	-4.3
2,237,096	-		CCNA_02087	0.62	-1.2
2,237,108	+		CCNA_02087	0.63	+1.4
2,237,108	+		CCNA_02087	0.63	-0.8
2,237,116	-		CCNA_02087	0.64	-4.3
2,237,116	-				-0.6
2,237,126	-		CCNA_02087	0.65	-4.0
2,237,143	+		CCNA_02087	0.66	-1.2
2,237,143	+		CCNA_02087	0.66	-1.0
2,237,144	+		CCNA_02087	0.66	-1.7
2,237,144	+		CCNA_02087	0.66	-0.8
2,237,151	-		CCNA_02087	0.67	-5.1
2,237,151	-		CCNA_02087	0.67	-4.1
2,237,151	-		CCNA_02087	0.67	-5.3
2,237,152	-		CCNA_02087	0.67	-3.1
2,237,152	-		CCNA_02087	0.67	-4.9
2,237,196	+		CCNA_02087	0.71	-1.6
2,237,204	-		CCNA_02087	0.71	-3.4
2,237,205	-		CCNA_02087	0.72	-3.2
2,237,212	+		CCNA_02087	0.72	-4.5
2,237,227	+		CCNA_02087	0.73	-1.1
2,237,235	-		CCNA_02087	0.74	-4.2
2,237,235	-		CCNA_02087	0.74	-4.1
2,237,235	-		CCNA_02087	0.74	-1.3
2,237,242	-		CCNA_02087	0.75	-4.1
2,237,246	+		CCNA_02087	0.75	-1.1
2,237,252	+		CCNA_02087	0.76	-0.8
2,237,271	-		CCNA_02087	0.77	-2.5
2,237,283	-		CCNA_02087	0.78	-2.2
2,237,288	+		CCNA_02087	0.79	-0.1
2,237,319	+		CCNA_02087	0.81	-1.6
2,237,321	-		CCNA_02087	0.81	-4.2
2,237,326	+		CCNA_02087	0.82	-1.3
2,237,326	+		CCNA_02087	0.82	+0.0
2,237,334	-		CCNA_02087	0.82	-1.5
2,237,368	+		CCNA_02087	0.85	-1.1
2,237,383	-		CCNA_02087	0.87	-3.1
2,237,398	+		CCNA_02087	0.88	-0.8
2,237,439	+				-3.4
2,237,447	-				-1.3
2,237,447	-				-1.5
2,237,462	+				-1.5
2,237,463	+				-1.7
2,237,470	-				-1.1
2,237,496	+				-3.0
2,237,500	+				-0.5
2,237,531	+				-0.2
2,237,537	+				+0.4
2,237,537	+				-1.5
2,237,545	-				-2.0
2,237,575	+				-0.2
2,237,583	-				-0.8
2,237,583	-				-0.6
2,237,595	+				-1.1
2,237,599	+				+0.4
2,237,603	-				+0.8
2,237,603	-				-0.7
2,237,603	-				-0.2
2,237,603	-				-1.7
2,237,603	-				+0.5
2,237,627	+				-0.4
2,237,635	-				-0.2
2,237,635	-				-0.8
2,237,706	+		CCNA_02088	0.23	+0.4
2,237,706	+		CCNA_02088	0.23	-1.3
2,237,778	+		CCNA_02088	0.44	-1.0
2,237,974	+				+0.1
2,237,982	-				+2.4
2,238,012	+		CCNA_02089	0.12	-0.3
2,238,015	-		CCNA_02089	0.13	-0.4
2,238,015	-		CCNA_02089	0.13	-0.3
2,238,015	-		CCNA_02089	0.13	-0.6
2,238,015	-		CCNA_02089	0.13	+1.3
2,238,015	-		CCNA_02089	0.13	-1.0
2,238,020	-		CCNA_02089	0.14	-1.0
2,238,034	+		CCNA_02089	0.18	-0.5
2,238,042	-		CCNA_02089	0.20	+0.9
2,238,103	+		CCNA_02089	0.36	+0.0
2,238,103	+		CCNA_02089	0.36	-1.5
2,238,103	+		CCNA_02089	0.36	-1.4
2,238,103	+		CCNA_02089	0.36	-1.7
2,238,103	+		CCNA_02089	0.36	+0.1
2,238,103	+		CCNA_02089	0.36	+0.2
2,238,108	+		CCNA_02089	0.38	-1.0
2,238,111	-		CCNA_02089	0.38	+0.4
2,238,111	-		CCNA_02089	0.38	-2.6
2,238,111	-		CCNA_02089	0.38	-1.6
2,238,111	-		CCNA_02089	0.38	+2.4
2,238,111	-		CCNA_02089	0.38	+0.0
2,238,111	-		CCNA_02089	0.38	-1.0
2,238,111	-		CCNA_02089	0.38	+0.8
2,238,111	-		CCNA_02089	0.38	+0.7
2,238,146	+		CCNA_02089	0.48	+0.9
2,238,174	+		CCNA_02089	0.55	+1.1
2,238,174	+		CCNA_02089	0.55	-0.3
2,238,174	+		CCNA_02089	0.55	+1.1
2,238,177	-		CCNA_02089	0.56	+0.4
2,238,182	-		CCNA_02089	0.57	+3.4
2,238,182	-		CCNA_02089	0.57	+0.3
2,238,182	-		CCNA_02089	0.57	+1.1
2,238,182	-		CCNA_02089	0.57	+0.7
2,238,200	-		CCNA_02089	0.62	+0.6
2,238,298	+		CCNA_02089	0.88	+0.2
2,238,298	+		CCNA_02089	0.88	-0.5
2,238,298	+		CCNA_02089	0.88	+0.5
2,238,298	+		CCNA_02089	0.88	-1.6
2,238,298	+		CCNA_02089	0.88	-1.1
2,238,421	+		CCNA_02090	0.10	+0.8
2,238,427	-		CCNA_02090	0.11	+0.9
2,238,450	-		CCNA_02090	0.14	-0.7