Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25015

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25005 and BWI76_RS25010 overlap by 1 nucleotidesBWI76_RS25010 and BWI76_RS25015 are separated by 17 nucleotidesBWI76_RS25015 and BWI76_RS25020 overlap by 4 nucleotidesBWI76_RS25020 and BWI76_RS25025 are separated by 22 nucleotides BWI76_RS25005: BWI76_RS25005 - biotin-independent malonate decarboxylase subunit beta, at 5,207,176 to 5,208,105 _RS25005 BWI76_RS25010: BWI76_RS25010 - malonyl-S-acyl carrier protein--biotin carboxyltransferase, at 5,208,105 to 5,208,986 _RS25010 BWI76_RS25015: BWI76_RS25015 - hypothetical protein, at 5,209,004 to 5,210,107 _RS25015 BWI76_RS25020: BWI76_RS25020 - hypothetical protein, at 5,210,104 to 5,210,778 _RS25020 BWI76_RS25025: BWI76_RS25025 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 5,210,801 to 5,211,019 _RS25025 Position (kb) 5209 5210 5211Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 5208.195 kb on - strand, within BWI76_RS25010at 5208.214 kb on + strand, within BWI76_RS25010at 5208.235 kb on - strand, within BWI76_RS25010at 5208.242 kb on + strand, within BWI76_RS25010at 5208.498 kb on - strand, within BWI76_RS25010at 5208.576 kb on + strand, within BWI76_RS25010at 5208.651 kb on + strand, within BWI76_RS25010at 5208.763 kb on - strand, within BWI76_RS25010at 5208.784 kb on - strand, within BWI76_RS25010at 5208.868 kb on + strand, within BWI76_RS25010at 5208.870 kb on + strand, within BWI76_RS25010at 5208.986 kb on + strandat 5209.168 kb on - strand, within BWI76_RS25015at 5209.310 kb on - strand, within BWI76_RS25015at 5209.342 kb on + strand, within BWI76_RS25015at 5209.479 kb on + strand, within BWI76_RS25015at 5209.573 kb on + strand, within BWI76_RS25015at 5209.692 kb on + strand, within BWI76_RS25015at 5209.694 kb on - strand, within BWI76_RS25015at 5209.903 kb on + strand, within BWI76_RS25015at 5209.923 kb on - strand, within BWI76_RS25015at 5210.071 kb on + strandat 5210.128 kb on - strandat 5210.138 kb on - strandat 5210.206 kb on + strand, within BWI76_RS25020at 5210.314 kb on - strand, within BWI76_RS25020at 5210.318 kb on + strand, within BWI76_RS25020at 5210.346 kb on + strand, within BWI76_RS25020at 5210.363 kb on + strand, within BWI76_RS25020at 5210.431 kb on - strand, within BWI76_RS25020at 5210.470 kb on + strand, within BWI76_RS25020at 5210.479 kb on - strand, within BWI76_RS25020at 5210.504 kb on + strand, within BWI76_RS25020at 5210.511 kb on + strand, within BWI76_RS25020at 5210.511 kb on + strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.519 kb on - strand, within BWI76_RS25020at 5210.546 kb on - strand, within BWI76_RS25020at 5210.584 kb on + strand, within BWI76_RS25020at 5210.589 kb on - strand, within BWI76_RS25020at 5210.598 kb on - strand, within BWI76_RS25020at 5210.598 kb on - strand, within BWI76_RS25020at 5210.599 kb on - strand, within BWI76_RS25020at 5210.599 kb on - strand, within BWI76_RS25020at 5210.600 kb on + strand, within BWI76_RS25020at 5210.608 kb on - strand, within BWI76_RS25020at 5210.614 kb on + strand, within BWI76_RS25020at 5210.619 kb on + strand, within BWI76_RS25020at 5210.641 kb on + strand, within BWI76_RS25020at 5210.647 kb on + strand, within BWI76_RS25020at 5210.666 kb on + strand, within BWI76_RS25020at 5210.674 kb on + strand, within BWI76_RS25020at 5210.679 kb on + strand, within BWI76_RS25020at 5210.690 kb on + strand, within BWI76_RS25020at 5210.690 kb on + strand, within BWI76_RS25020at 5210.690 kb on + strand, within BWI76_RS25020at 5210.693 kb on + strand, within BWI76_RS25020at 5210.693 kb on + strand, within BWI76_RS25020at 5210.701 kb on - strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.703 kb on + strand, within BWI76_RS25020at 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.711 kb on - strandat 5210.715 kb on + strandat 5210.718 kb on - strandat 5210.718 kb on - strandat 5210.745 kb on + strandat 5210.745 kb on + strandat 5210.745 kb on + strandat 5210.753 kb on - strandat 5210.762 kb on + strandat 5210.762 kb on + strandat 5210.762 kb on + strandat 5210.770 kb on - strandat 5210.770 kb on - strandat 5210.772 kb on + strandat 5210.772 kb on + strandat 5210.774 kb on + strandat 5210.780 kb on - strandat 5210.822 kb on + strandat 5210.831 kb on - strand, within BWI76_RS25025at 5210.836 kb on - strandat 5210.850 kb on - strand, within BWI76_RS25025at 5210.881 kb on + strand, within BWI76_RS25025at 5210.884 kb on - strand, within BWI76_RS25025at 5210.884 kb on - strand, within BWI76_RS25025at 5210.886 kb on + strand, within BWI76_RS25025at 5210.893 kb on + strand, within BWI76_RS25025at 5210.962 kb on + strand, within BWI76_RS25025at 5210.962 kb on + strand, within BWI76_RS25025at 5210.962 kb on + strand, within BWI76_RS25025at 5210.962 kb on + strand, within BWI76_RS25025at 5210.964 kb on + strand, within BWI76_RS25025at 5210.964 kb on + strand, within BWI76_RS25025at 5210.964 kb on + strand, within BWI76_RS25025at 5210.964 kb on + strand, within BWI76_RS25025at 5210.964 kb on + strand, within BWI76_RS25025at 5210.966 kb on + strand, within BWI76_RS25025at 5210.966 kb on + strand, within BWI76_RS25025at 5210.967 kb on + strand, within BWI76_RS25025at 5210.972 kb on - strand, within BWI76_RS25025at 5210.972 kb on - strand, within BWI76_RS25025at 5210.977 kb on + strand, within BWI76_RS25025at 5210.977 kb on + strand, within BWI76_RS25025at 5210.977 kb on + strand, within BWI76_RS25025at 5210.981 kb on + strand, within BWI76_RS25025at 5210.981 kb on + strand, within BWI76_RS25025at 5210.982 kb on - strand, within BWI76_RS25025at 5210.985 kb on - strand, within BWI76_RS25025at 5210.987 kb on + strand, within BWI76_RS25025at 5210.995 kb on - strand, within BWI76_RS25025at 5211.059 kb on + strandat 5211.088 kb on + strandat 5211.102 kb on + strandat 5211.102 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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5,208,195 - BWI76_RS25010 0.10 -0.8
5,208,214 + BWI76_RS25010 0.12 +2.5
5,208,235 - BWI76_RS25010 0.15 -0.3
5,208,242 + BWI76_RS25010 0.16 -0.1
5,208,498 - BWI76_RS25010 0.45 +0.0
5,208,576 + BWI76_RS25010 0.53 -0.5
5,208,651 + BWI76_RS25010 0.62 -3.2
5,208,763 - BWI76_RS25010 0.75 -0.8
5,208,784 - BWI76_RS25010 0.77 +1.7
5,208,868 + BWI76_RS25010 0.87 -0.8
5,208,870 + BWI76_RS25010 0.87 -2.3
5,208,986 + +0.8
5,209,168 - BWI76_RS25015 0.15 +1.3
5,209,310 - BWI76_RS25015 0.28 -2.2
5,209,342 + BWI76_RS25015 0.31 -0.3
5,209,479 + BWI76_RS25015 0.43 +1.3
5,209,573 + BWI76_RS25015 0.52 +1.5
5,209,692 + BWI76_RS25015 0.62 +2.4
5,209,694 - BWI76_RS25015 0.62 -2.7
5,209,903 + BWI76_RS25015 0.81 +0.6
5,209,923 - BWI76_RS25015 0.83 +0.7
5,210,071 + -2.5
5,210,128 - -1.3
5,210,138 - +0.5
5,210,206 + BWI76_RS25020 0.15 +0.6
5,210,314 - BWI76_RS25020 0.31 -1.5
5,210,318 + BWI76_RS25020 0.32 -0.9
5,210,346 + BWI76_RS25020 0.36 +2.4
5,210,363 + BWI76_RS25020 0.38 +0.3
5,210,431 - BWI76_RS25020 0.48 -0.1
5,210,470 + BWI76_RS25020 0.54 +1.2
5,210,479 - BWI76_RS25020 0.56 +1.0
5,210,504 + BWI76_RS25020 0.59 -2.8
5,210,511 + BWI76_RS25020 0.60 +1.2
5,210,511 + BWI76_RS25020 0.60 -0.3
5,210,519 - BWI76_RS25020 0.61 +1.2
5,210,519 - BWI76_RS25020 0.61 -2.4
5,210,519 - BWI76_RS25020 0.61 -0.0
5,210,519 - BWI76_RS25020 0.61 -1.7
5,210,519 - BWI76_RS25020 0.61 -0.8
5,210,519 - BWI76_RS25020 0.61 -1.4
5,210,546 - BWI76_RS25020 0.65 -0.4
5,210,584 + BWI76_RS25020 0.71 +2.7
5,210,589 - BWI76_RS25020 0.72 -1.0
5,210,598 - BWI76_RS25020 0.73 -4.1
5,210,598 - BWI76_RS25020 0.73 +0.4
5,210,599 - BWI76_RS25020 0.73 +0.2
5,210,599 - BWI76_RS25020 0.73 +1.0
5,210,600 + BWI76_RS25020 0.73 +0.8
5,210,608 - BWI76_RS25020 0.75 -1.3
5,210,614 + BWI76_RS25020 0.76 +1.8
5,210,619 + BWI76_RS25020 0.76 -2.9
5,210,641 + BWI76_RS25020 0.80 -0.8
5,210,647 + BWI76_RS25020 0.80 -0.0
5,210,666 + BWI76_RS25020 0.83 +0.5
5,210,674 + BWI76_RS25020 0.84 +0.1
5,210,679 + BWI76_RS25020 0.85 +1.1
5,210,690 + BWI76_RS25020 0.87 +0.4
5,210,690 + BWI76_RS25020 0.87 +0.7
5,210,690 + BWI76_RS25020 0.87 -2.5
5,210,693 + BWI76_RS25020 0.87 +0.8
5,210,693 + BWI76_RS25020 0.87 +0.6
5,210,701 - BWI76_RS25020 0.88 -1.9
5,210,703 + BWI76_RS25020 0.89 -0.5
5,210,703 + BWI76_RS25020 0.89 -0.1
5,210,703 + BWI76_RS25020 0.89 +0.4
5,210,703 + BWI76_RS25020 0.89 +0.6
5,210,703 + BWI76_RS25020 0.89 -0.7
5,210,703 + BWI76_RS25020 0.89 -1.2
5,210,703 + BWI76_RS25020 0.89 +0.2
5,210,703 + BWI76_RS25020 0.89 +0.6
5,210,703 + BWI76_RS25020 0.89 -0.3
5,210,703 + BWI76_RS25020 0.89 -0.4
5,210,703 + BWI76_RS25020 0.89 +0.2
5,210,703 + BWI76_RS25020 0.89 -1.1
5,210,703 + BWI76_RS25020 0.89 +0.5
5,210,703 + BWI76_RS25020 0.89 -0.5
5,210,703 + BWI76_RS25020 0.89 +0.2
5,210,703 + BWI76_RS25020 0.89 +0.8
5,210,703 + BWI76_RS25020 0.89 +0.4
5,210,703 + BWI76_RS25020 0.89 +0.3
5,210,703 + BWI76_RS25020 0.89 -0.4
5,210,703 + BWI76_RS25020 0.89 -0.4
5,210,703 + BWI76_RS25020 0.89 +0.5
5,210,703 + BWI76_RS25020 0.89 -1.3
5,210,703 + BWI76_RS25020 0.89 -0.4
5,210,703 + BWI76_RS25020 0.89 -1.6
5,210,703 + BWI76_RS25020 0.89 +0.2
5,210,711 - -0.8
5,210,711 - +0.9
5,210,711 - +1.0
5,210,711 - +1.0
5,210,711 - +4.4
5,210,711 - -1.3
5,210,711 - +2.7
5,210,711 - -0.2
5,210,711 - -3.0
5,210,711 - +0.8
5,210,711 - -1.4
5,210,711 - +0.1
5,210,715 + -1.3
5,210,718 - +0.4
5,210,718 - +0.8
5,210,745 + +2.9
5,210,745 + -0.2
5,210,745 + -0.4
5,210,753 - -0.4
5,210,762 + -0.8
5,210,762 + +0.1
5,210,762 + +0.3
5,210,770 - +0.2
5,210,770 - -1.3
5,210,772 + -3.1
5,210,772 + -0.6
5,210,774 + -0.0
5,210,780 - -0.9
5,210,822 + -0.0
5,210,831 - BWI76_RS25025 0.14 -0.3
5,210,836 - +2.4
5,210,850 - BWI76_RS25025 0.22 +0.8
5,210,881 + BWI76_RS25025 0.37 -1.5
5,210,884 - BWI76_RS25025 0.38 -1.9
5,210,884 - BWI76_RS25025 0.38 +0.4
5,210,886 + BWI76_RS25025 0.39 -1.6
5,210,893 + BWI76_RS25025 0.42 +0.0
5,210,962 + BWI76_RS25025 0.74 -0.2
5,210,962 + BWI76_RS25025 0.74 -4.0
5,210,962 + BWI76_RS25025 0.74 -1.9
5,210,962 + BWI76_RS25025 0.74 +0.6
5,210,964 + BWI76_RS25025 0.74 -3.1
5,210,964 + BWI76_RS25025 0.74 -2.7
5,210,964 + BWI76_RS25025 0.74 +0.1
5,210,964 + BWI76_RS25025 0.74 -0.8
5,210,964 + BWI76_RS25025 0.74 +2.4
5,210,966 + BWI76_RS25025 0.75 -2.7
5,210,966 + BWI76_RS25025 0.75 +0.9
5,210,967 + BWI76_RS25025 0.76 +1.0
5,210,972 - BWI76_RS25025 0.78 +0.4
5,210,972 - BWI76_RS25025 0.78 -1.1
5,210,977 + BWI76_RS25025 0.80 -0.6
5,210,977 + BWI76_RS25025 0.80 +0.5
5,210,977 + BWI76_RS25025 0.80 -2.3
5,210,981 + BWI76_RS25025 0.82 +0.3
5,210,981 + BWI76_RS25025 0.82 -2.1
5,210,982 - BWI76_RS25025 0.83 -1.8
5,210,985 - BWI76_RS25025 0.84 +0.8
5,210,987 + BWI76_RS25025 0.85 +1.2
5,210,995 - BWI76_RS25025 0.89 -1.2
5,211,059 + +0.3
5,211,088 + -0.1
5,211,102 + +1.0
5,211,102 + +1.0

Or see this region's nucleotide sequence