Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19645

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19640 and BWI76_RS19645 are separated by 118 nucleotidesBWI76_RS19645 and BWI76_RS19650 are separated by 288 nucleotides BWI76_RS19640: BWI76_RS19640 - galactose/methyl galactoside ABC transporter ATP-binding protein MglA, at 4,103,970 to 4,105,490 _RS19640 BWI76_RS19645: BWI76_RS19645 - galactose ABC transporter substrate-binding protein, at 4,105,609 to 4,106,607 _RS19645 BWI76_RS19650: BWI76_RS19650 - DNA-binding transcriptional regulator GalS, at 4,106,896 to 4,107,918 _RS19650 Position (kb) 4105 4106 4107Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6at 4104.626 kb on - strand, within BWI76_RS19640at 4104.643 kb on - strand, within BWI76_RS19640at 4104.674 kb on + strand, within BWI76_RS19640at 4104.684 kb on - strand, within BWI76_RS19640at 4104.689 kb on + strand, within BWI76_RS19640at 4104.689 kb on + strand, within BWI76_RS19640at 4104.694 kb on + strand, within BWI76_RS19640at 4104.697 kb on - strand, within BWI76_RS19640at 4104.697 kb on - strand, within BWI76_RS19640at 4104.697 kb on - strand, within BWI76_RS19640at 4104.697 kb on - strand, within BWI76_RS19640at 4104.737 kb on + strand, within BWI76_RS19640at 4104.737 kb on + strand, within BWI76_RS19640at 4104.745 kb on - strand, within BWI76_RS19640at 4104.745 kb on - strand, within BWI76_RS19640at 4104.745 kb on - strand, within BWI76_RS19640at 4104.745 kb on - strandat 4104.750 kb on + strand, within BWI76_RS19640at 4104.763 kb on + strand, within BWI76_RS19640at 4104.768 kb on + strand, within BWI76_RS19640at 4104.777 kb on - strand, within BWI76_RS19640at 4104.779 kb on + strand, within BWI76_RS19640at 4104.788 kb on - strand, within BWI76_RS19640at 4104.800 kb on + strand, within BWI76_RS19640at 4104.805 kb on + strand, within BWI76_RS19640at 4104.805 kb on + strand, within BWI76_RS19640at 4104.805 kb on + strand, within BWI76_RS19640at 4104.810 kb on + strand, within BWI76_RS19640at 4104.813 kb on - strand, within BWI76_RS19640at 4104.813 kb on - strand, within BWI76_RS19640at 4104.835 kb on - strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.848 kb on + strand, within BWI76_RS19640at 4104.856 kb on - strand, within BWI76_RS19640at 4104.856 kb on - strand, within BWI76_RS19640at 4104.856 kb on - strand, within BWI76_RS19640at 4104.856 kb on - strand, within BWI76_RS19640at 4104.856 kb on - strand, within BWI76_RS19640at 4104.902 kb on + strand, within BWI76_RS19640at 4104.902 kb on + strand, within BWI76_RS19640at 4104.902 kb on + strand, within BWI76_RS19640at 4104.902 kb on + strand, within BWI76_RS19640at 4104.910 kb on - strand, within BWI76_RS19640at 4104.910 kb on - strand, within BWI76_RS19640at 4104.919 kb on + strand, within BWI76_RS19640at 4104.949 kb on - strand, within BWI76_RS19640at 4104.949 kb on - strand, within BWI76_RS19640at 4105.043 kb on + strand, within BWI76_RS19640at 4105.043 kb on + strand, within BWI76_RS19640at 4105.043 kb on + strand, within BWI76_RS19640at 4105.044 kb on - strand, within BWI76_RS19640at 4105.045 kb on + strand, within BWI76_RS19640at 4105.051 kb on - strand, within BWI76_RS19640at 4105.053 kb on - strand, within BWI76_RS19640at 4105.114 kb on + strand, within BWI76_RS19640at 4105.122 kb on - strand, within BWI76_RS19640at 4105.122 kb on - strand, within BWI76_RS19640at 4105.138 kb on + strand, within BWI76_RS19640at 4105.146 kb on - strand, within BWI76_RS19640at 4105.146 kb on - strand, within BWI76_RS19640at 4105.153 kb on + strand, within BWI76_RS19640at 4105.159 kb on + strand, within BWI76_RS19640at 4105.159 kb on + strand, within BWI76_RS19640at 4105.160 kb on + strand, within BWI76_RS19640at 4105.167 kb on - strand, within BWI76_RS19640at 4105.167 kb on - strand, within BWI76_RS19640at 4105.168 kb on - strand, within BWI76_RS19640at 4105.170 kb on + strand, within BWI76_RS19640at 4105.177 kb on + strand, within BWI76_RS19640at 4105.191 kb on - strand, within BWI76_RS19640at 4105.193 kb on - strand, within BWI76_RS19640at 4105.285 kb on - strand, within BWI76_RS19640at 4105.352 kb on + strandat 4105.352 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.362 kb on + strandat 4105.366 kb on + strandat 4105.367 kb on + strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.370 kb on - strandat 4105.380 kb on - strandat 4105.384 kb on + strandat 4105.384 kb on + strandat 4105.384 kb on + strandat 4105.384 kb on + strandat 4105.385 kb on + strandat 4105.385 kb on + strandat 4105.385 kb on + strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.392 kb on - strandat 4105.393 kb on - strandat 4105.393 kb on - strandat 4105.408 kb on + strandat 4105.408 kb on + strandat 4105.408 kb on + strandat 4105.408 kb on + strandat 4105.408 kb on + strandat 4105.409 kb on + strandat 4105.409 kb on + strandat 4105.416 kb on - strandat 4105.466 kb on + strandat 4105.487 kb on + strandat 4105.487 kb on + strandat 4105.490 kb on + strandat 4105.491 kb on + strandat 4105.492 kb on + strandat 4105.492 kb on + strandat 4105.498 kb on - strandat 4105.498 kb on - strandat 4105.498 kb on - strandat 4105.498 kb on - strandat 4105.498 kb on - strandat 4105.499 kb on - strandat 4105.499 kb on - strandat 4105.499 kb on - strandat 4105.499 kb on - strandat 4105.499 kb on - strandat 4105.499 kb on - strandat 4105.500 kb on - strandat 4105.503 kb on - strandat 4105.512 kb on + strandat 4105.512 kb on + strandat 4105.512 kb on + strandat 4105.513 kb on + strandat 4105.520 kb on - strandat 4105.520 kb on - strandat 4105.520 kb on - strandat 4105.520 kb on - strandat 4105.520 kb on - strandat 4105.521 kb on - strandat 4105.535 kb on + strandat 4105.543 kb on - strandat 4105.545 kb on + strandat 4105.545 kb on + strandat 4105.551 kb on + strandat 4105.555 kb on - strandat 4105.598 kb on - strandat 4105.612 kb on - strandat 4105.612 kb on - strandat 4105.636 kb on + strandat 4105.644 kb on - strandat 4105.644 kb on - strandat 4105.644 kb on - strandat 4105.651 kb on + strandat 4105.654 kb on - strandat 4105.657 kb on - strandat 4105.659 kb on - strandat 4105.719 kb on - strand, within BWI76_RS19645at 4105.759 kb on + strand, within BWI76_RS19645at 4105.777 kb on - strand, within BWI76_RS19645at 4105.779 kb on - strand, within BWI76_RS19645at 4105.779 kb on - strand, within BWI76_RS19645at 4105.845 kb on + strand, within BWI76_RS19645at 4105.889 kb on + strand, within BWI76_RS19645at 4106.096 kb on + strand, within BWI76_RS19645at 4106.111 kb on + strand, within BWI76_RS19645at 4106.187 kb on - strand, within BWI76_RS19645at 4106.239 kb on + strand, within BWI76_RS19645at 4106.295 kb on - strand, within BWI76_RS19645at 4106.466 kb on + strand, within BWI76_RS19645at 4106.471 kb on + strand, within BWI76_RS19645at 4106.532 kb on + strandat 4106.538 kb on - strandat 4106.587 kb on + strandat 4106.610 kb on + strandat 4106.718 kb on + strandat 4106.802 kb on + strandat 4107.004 kb on + strand, within BWI76_RS19650at 4107.181 kb on + strand, within BWI76_RS19650at 4107.198 kb on - strand, within BWI76_RS19650at 4107.207 kb on + strand, within BWI76_RS19650at 4107.398 kb on + strand, within BWI76_RS19650at 4107.434 kb on - strand, within BWI76_RS19650at 4107.528 kb on + strand, within BWI76_RS19650

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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4,104,626 - BWI76_RS19640 0.43 +0.2
4,104,643 - BWI76_RS19640 0.44 -1.8
4,104,674 + BWI76_RS19640 0.46 +0.7
4,104,684 - BWI76_RS19640 0.47 -2.1
4,104,689 + BWI76_RS19640 0.47 +0.9
4,104,689 + BWI76_RS19640 0.47 -1.0
4,104,694 + BWI76_RS19640 0.48 +0.3
4,104,697 - BWI76_RS19640 0.48 -3.9
4,104,697 - BWI76_RS19640 0.48 +0.0
4,104,697 - BWI76_RS19640 0.48 -0.2
4,104,697 - BWI76_RS19640 0.48 +0.3
4,104,737 + BWI76_RS19640 0.50 +0.5
4,104,737 + BWI76_RS19640 0.50 -1.2
4,104,745 - BWI76_RS19640 0.51 -1.8
4,104,745 - BWI76_RS19640 0.51 +0.5
4,104,745 - BWI76_RS19640 0.51 +4.2
4,104,745 - +1.3
4,104,750 + BWI76_RS19640 0.51 -0.4
4,104,763 + BWI76_RS19640 0.52 -1.4
4,104,768 + BWI76_RS19640 0.52 -2.0
4,104,777 - BWI76_RS19640 0.53 +1.3
4,104,779 + BWI76_RS19640 0.53 +0.1
4,104,788 - BWI76_RS19640 0.54 -0.9
4,104,800 + BWI76_RS19640 0.55 +6.6
4,104,805 + BWI76_RS19640 0.55 +0.3
4,104,805 + BWI76_RS19640 0.55 +0.6
4,104,805 + BWI76_RS19640 0.55 -0.7
4,104,810 + BWI76_RS19640 0.55 +0.4
4,104,813 - BWI76_RS19640 0.55 -1.0
4,104,813 - BWI76_RS19640 0.55 -1.2
4,104,835 - BWI76_RS19640 0.57 -0.3
4,104,848 + BWI76_RS19640 0.58 +0.6
4,104,848 + BWI76_RS19640 0.58 -1.5
4,104,848 + BWI76_RS19640 0.58 -0.4
4,104,848 + BWI76_RS19640 0.58 -2.2
4,104,848 + BWI76_RS19640 0.58 +1.6
4,104,848 + BWI76_RS19640 0.58 -0.1
4,104,856 - BWI76_RS19640 0.58 +1.6
4,104,856 - BWI76_RS19640 0.58 -0.6
4,104,856 - BWI76_RS19640 0.58 -0.0
4,104,856 - BWI76_RS19640 0.58 -0.6
4,104,856 - BWI76_RS19640 0.58 -1.2
4,104,902 + BWI76_RS19640 0.61 +0.3
4,104,902 + BWI76_RS19640 0.61 -0.3
4,104,902 + BWI76_RS19640 0.61 +1.4
4,104,902 + BWI76_RS19640 0.61 -1.0
4,104,910 - BWI76_RS19640 0.62 +1.3
4,104,910 - BWI76_RS19640 0.62 -1.0
4,104,919 + BWI76_RS19640 0.62 +1.1
4,104,949 - BWI76_RS19640 0.64 -2.4
4,104,949 - BWI76_RS19640 0.64 +0.6
4,105,043 + BWI76_RS19640 0.71 -4.0
4,105,043 + BWI76_RS19640 0.71 +0.7
4,105,043 + BWI76_RS19640 0.71 -2.4
4,105,044 - BWI76_RS19640 0.71 -0.3
4,105,045 + BWI76_RS19640 0.71 -3.8
4,105,051 - BWI76_RS19640 0.71 +2.1
4,105,053 - BWI76_RS19640 0.71 +0.1
4,105,114 + BWI76_RS19640 0.75 +0.2
4,105,122 - BWI76_RS19640 0.76 +0.9
4,105,122 - BWI76_RS19640 0.76 -0.3
4,105,138 + BWI76_RS19640 0.77 -1.7
4,105,146 - BWI76_RS19640 0.77 -0.4
4,105,146 - BWI76_RS19640 0.77 -1.8
4,105,153 + BWI76_RS19640 0.78 -0.9
4,105,159 + BWI76_RS19640 0.78 -1.7
4,105,159 + BWI76_RS19640 0.78 -1.4
4,105,160 + BWI76_RS19640 0.78 -0.6
4,105,167 - BWI76_RS19640 0.79 -1.4
4,105,167 - BWI76_RS19640 0.79 -1.9
4,105,168 - BWI76_RS19640 0.79 +0.1
4,105,170 + BWI76_RS19640 0.79 +0.6
4,105,177 + BWI76_RS19640 0.79 +0.3
4,105,191 - BWI76_RS19640 0.80 -2.5
4,105,193 - BWI76_RS19640 0.80 +1.9
4,105,285 - BWI76_RS19640 0.86 -2.1
4,105,352 + +4.3
4,105,352 + -0.3
4,105,362 + -0.1
4,105,362 + +0.3
4,105,362 + -0.1
4,105,362 + +0.9
4,105,362 + -1.9
4,105,362 + -4.0
4,105,362 + -1.8
4,105,362 + -3.7
4,105,362 + +0.0
4,105,362 + -1.1
4,105,362 + +1.0
4,105,362 + -0.3
4,105,366 + +0.1
4,105,367 + -0.6
4,105,370 - -0.4
4,105,370 - -1.9
4,105,370 - -2.2
4,105,370 - -0.3
4,105,370 - -0.7
4,105,370 - +0.3
4,105,370 - +1.3
4,105,370 - -3.1
4,105,380 - -1.4
4,105,384 + -0.9
4,105,384 + +1.3
4,105,384 + -2.6
4,105,384 + -3.8
4,105,385 + -1.0
4,105,385 + +0.0
4,105,385 + -0.1
4,105,392 - -2.8
4,105,392 - -1.4
4,105,392 - -1.0
4,105,392 - -2.1
4,105,392 - +4.1
4,105,392 - +1.5
4,105,392 - -3.5
4,105,392 - -1.6
4,105,393 - +0.0
4,105,393 - -2.5
4,105,408 + +0.8
4,105,408 + +0.1
4,105,408 + -1.3
4,105,408 + -0.6
4,105,408 + -0.6
4,105,409 + -1.7
4,105,409 + -0.9
4,105,416 - +0.7
4,105,466 + -3.0
4,105,487 + -4.2
4,105,487 + +1.0
4,105,490 + -0.7
4,105,491 + -1.9
4,105,492 + -0.1
4,105,492 + -2.1
4,105,498 - -1.2
4,105,498 - +2.1
4,105,498 - +0.7
4,105,498 - +0.2
4,105,498 - +1.7
4,105,499 - -1.1
4,105,499 - +0.7
4,105,499 - -1.1
4,105,499 - -1.6
4,105,499 - -0.7
4,105,499 - +1.1
4,105,500 - +1.5
4,105,503 - +1.4
4,105,512 + -0.2
4,105,512 + +0.7
4,105,512 + -1.5
4,105,513 + -0.8
4,105,520 - -1.1
4,105,520 - -1.4
4,105,520 - -2.2
4,105,520 - +1.3
4,105,520 - -0.1
4,105,521 - -0.9
4,105,535 + -0.3
4,105,543 - +1.4
4,105,545 + -0.2
4,105,545 + +1.4
4,105,551 + +1.0
4,105,555 - -0.4
4,105,598 - +0.3
4,105,612 - -0.1
4,105,612 - +0.1
4,105,636 + -2.1
4,105,644 - -0.6
4,105,644 - -0.1
4,105,644 - -0.2
4,105,651 + -0.5
4,105,654 - +0.4
4,105,657 - +0.1
4,105,659 - +0.7
4,105,719 - BWI76_RS19645 0.11 -0.0
4,105,759 + BWI76_RS19645 0.15 -3.8
4,105,777 - BWI76_RS19645 0.17 -0.7
4,105,779 - BWI76_RS19645 0.17 +0.7
4,105,779 - BWI76_RS19645 0.17 -0.3
4,105,845 + BWI76_RS19645 0.24 +0.7
4,105,889 + BWI76_RS19645 0.28 +0.3
4,106,096 + BWI76_RS19645 0.49 +0.5
4,106,111 + BWI76_RS19645 0.50 -3.7
4,106,187 - BWI76_RS19645 0.58 -0.9
4,106,239 + BWI76_RS19645 0.63 +1.2
4,106,295 - BWI76_RS19645 0.69 +1.7
4,106,466 + BWI76_RS19645 0.86 -1.6
4,106,471 + BWI76_RS19645 0.86 +0.5
4,106,532 + +1.8
4,106,538 - +1.2
4,106,587 + -1.1
4,106,610 + +1.5
4,106,718 + +0.8
4,106,802 + +1.2
4,107,004 + BWI76_RS19650 0.11 +2.3
4,107,181 + BWI76_RS19650 0.28 -0.9
4,107,198 - BWI76_RS19650 0.30 +0.5
4,107,207 + BWI76_RS19650 0.30 +0.3
4,107,398 + BWI76_RS19650 0.49 +2.5
4,107,434 - BWI76_RS19650 0.53 +1.6
4,107,528 + BWI76_RS19650 0.62 -2.4

Or see this region's nucleotide sequence