Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15265 and BWI76_RS15270 are separated by 142 nucleotides BWI76_RS15270 and BWI76_RS15275 are separated by 9 nucleotides BWI76_RS15275 and BWI76_RS15280 are separated by 204 nucleotides
BWI76_RS15265: BWI76_RS15265 - hypothetical protein, at 3,198,817 to 3,200,097
_RS15265
BWI76_RS15270: BWI76_RS15270 - phenazine biosynthesis protein PhzF family, at 3,200,240 to 3,201,028
_RS15270
BWI76_RS15275: BWI76_RS15275 - isomerase, at 3,201,038 to 3,201,829
_RS15275
BWI76_RS15280: BWI76_RS15280 - sugar transporter, at 3,202,034 to 3,203,233
_RS15280
Position (kb)
3201
3202 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3200.165 kb on + strand at 3200.241 kb on - strand at 3200.246 kb on - strand at 3200.246 kb on - strand at 3200.653 kb on + strand, within BWI76_RS15270 at 3200.875 kb on + strand, within BWI76_RS15270 at 3200.896 kb on + strand, within BWI76_RS15270 at 3201.277 kb on - strand, within BWI76_RS15275 at 3201.401 kb on - strand, within BWI76_RS15275 at 3201.406 kb on - strand, within BWI76_RS15275 at 3201.664 kb on + strand, within BWI76_RS15275 at 3201.839 kb on - strand at 3201.924 kb on + strand at 3202.023 kb on + strand at 3202.138 kb on + strand at 3202.233 kb on + strand, within BWI76_RS15280 at 3202.605 kb on - strand, within BWI76_RS15280
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,200,165 + +1.7 3,200,241 - +0.5 3,200,246 - -1.9 3,200,246 - +1.2 3,200,653 + BWI76_RS15270 0.52 -1.1 3,200,875 + BWI76_RS15270 0.80 +0.2 3,200,896 + BWI76_RS15270 0.83 -0.5 3,201,277 - BWI76_RS15275 0.30 +0.5 3,201,401 - BWI76_RS15275 0.46 +0.2 3,201,406 - BWI76_RS15275 0.46 +1.9 3,201,664 + BWI76_RS15275 0.79 +1.3 3,201,839 - -0.3 3,201,924 + -1.9 3,202,023 + +0.8 3,202,138 + -1.6 3,202,233 + BWI76_RS15280 0.17 +0.4 3,202,605 - BWI76_RS15280 0.48 +0.1
Or see this region's nucleotide sequence