Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14945 and BWI76_RS14950 are separated by 4 nucleotides BWI76_RS14950 and BWI76_RS14955 are separated by 3 nucleotides BWI76_RS14955 and BWI76_RS14960 are separated by 217 nucleotides
BWI76_RS14945: BWI76_RS14945 - PTS system, cellobiose-specific IIC component, at 3,131,958 to 3,133,277
_RS14945
BWI76_RS14950: BWI76_RS14950 - glycosylasparaginase, at 3,133,282 to 3,134,235
_RS14950
BWI76_RS14955: BWI76_RS14955 - peptidase M17 leucyl aminopeptidase domain-containing protein, at 3,134,239 to 3,135,594
_RS14955
BWI76_RS14960: BWI76_RS14960 - MFS transporter, at 3,135,812 to 3,137,011
_RS14960
Position (kb)
3134
3135
3136 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3133.370 kb on + strand at 3133.421 kb on - strand at 3133.637 kb on + strand, within BWI76_RS14950 at 3133.851 kb on - strand, within BWI76_RS14950 at 3133.851 kb on - strand, within BWI76_RS14950 at 3134.204 kb on - strand at 3134.232 kb on - strand at 3134.529 kb on - strand, within BWI76_RS14955 at 3134.561 kb on + strand, within BWI76_RS14955 at 3135.083 kb on + strand, within BWI76_RS14955 at 3135.123 kb on + strand, within BWI76_RS14955 at 3135.314 kb on + strand, within BWI76_RS14955 at 3135.319 kb on + strand, within BWI76_RS14955 at 3135.346 kb on + strand, within BWI76_RS14955 at 3135.393 kb on + strand, within BWI76_RS14955 at 3135.632 kb on - strand at 3135.733 kb on - strand at 3136.243 kb on + strand, within BWI76_RS14960 at 3136.251 kb on - strand, within BWI76_RS14960 at 3136.251 kb on - strand, within BWI76_RS14960 at 3136.289 kb on - strand, within BWI76_RS14960 at 3136.381 kb on - strand, within BWI76_RS14960 at 3136.427 kb on + strand, within BWI76_RS14960 at 3136.434 kb on + strand, within BWI76_RS14960
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,133,370 + +2.7 3,133,421 - +2.1 3,133,637 + BWI76_RS14950 0.37 -0.6 3,133,851 - BWI76_RS14950 0.60 -0.5 3,133,851 - BWI76_RS14950 0.60 -0.1 3,134,204 - +0.8 3,134,232 - -0.0 3,134,529 - BWI76_RS14955 0.21 -0.3 3,134,561 + BWI76_RS14955 0.24 -0.6 3,135,083 + BWI76_RS14955 0.62 +0.8 3,135,123 + BWI76_RS14955 0.65 +0.5 3,135,314 + BWI76_RS14955 0.79 -1.0 3,135,319 + BWI76_RS14955 0.80 -2.7 3,135,346 + BWI76_RS14955 0.82 -1.3 3,135,393 + BWI76_RS14955 0.85 -2.6 3,135,632 - +1.9 3,135,733 - -1.1 3,136,243 + BWI76_RS14960 0.36 +0.3 3,136,251 - BWI76_RS14960 0.37 -0.0 3,136,251 - BWI76_RS14960 0.37 -2.3 3,136,289 - BWI76_RS14960 0.40 +0.4 3,136,381 - BWI76_RS14960 0.47 -0.4 3,136,427 + BWI76_RS14960 0.51 +0.0 3,136,434 + BWI76_RS14960 0.52 +1.7
Or see this region's nucleotide sequence