Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14540 and BWI76_RS14545 overlap by 4 nucleotides BWI76_RS14545 and BWI76_RS14550 are separated by 3 nucleotides BWI76_RS14550 and BWI76_RS14555 are separated by 129 nucleotides
BWI76_RS14540: BWI76_RS14540 - yersiniabactin biosynthetic protein YbtU, at 3,051,676 to 3,052,773
_RS14540
BWI76_RS14545: BWI76_RS14545 - thioesterase, at 3,052,770 to 3,053,573
_RS14545
BWI76_RS14550: BWI76_RS14550 - 2,3-dihydroxybenzoate-AMP ligase, at 3,053,577 to 3,055,154
_RS14550
BWI76_RS14555: BWI76_RS14555 - Yersiniabactin/pesticin outer membrane receptor (IRPC), at 3,055,284 to 3,057,305
_RS14555
Position (kb)
3053
3054
3055
3056 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3052.830 kb on + strand at 3052.914 kb on + strand, within BWI76_RS14545 at 3052.948 kb on + strand, within BWI76_RS14545 at 3053.344 kb on + strand, within BWI76_RS14545 at 3053.384 kb on - strand, within BWI76_RS14545 at 3053.562 kb on + strand at 3054.132 kb on - strand, within BWI76_RS14550 at 3054.161 kb on - strand, within BWI76_RS14550 at 3054.198 kb on + strand, within BWI76_RS14550 at 3054.216 kb on - strand, within BWI76_RS14550 at 3054.294 kb on - strand, within BWI76_RS14550 at 3054.327 kb on - strand, within BWI76_RS14550 at 3054.409 kb on - strand, within BWI76_RS14550 at 3054.475 kb on + strand, within BWI76_RS14550 at 3054.693 kb on + strand, within BWI76_RS14550 at 3054.723 kb on + strand, within BWI76_RS14550 at 3054.999 kb on - strand at 3055.463 kb on - strand at 3055.500 kb on + strand, within BWI76_RS14555 at 3055.605 kb on - strand, within BWI76_RS14555 at 3055.667 kb on - strand, within BWI76_RS14555 at 3056.098 kb on - strand, within BWI76_RS14555
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,052,830 + -0.1 3,052,914 + BWI76_RS14545 0.18 -0.1 3,052,948 + BWI76_RS14545 0.22 -0.4 3,053,344 + BWI76_RS14545 0.71 -0.0 3,053,384 - BWI76_RS14545 0.76 -0.7 3,053,562 + +0.1 3,054,132 - BWI76_RS14550 0.35 -3.7 3,054,161 - BWI76_RS14550 0.37 +1.8 3,054,198 + BWI76_RS14550 0.39 -3.2 3,054,216 - BWI76_RS14550 0.40 -0.4 3,054,294 - BWI76_RS14550 0.45 -3.0 3,054,327 - BWI76_RS14550 0.48 -1.8 3,054,409 - BWI76_RS14550 0.53 -3.3 3,054,475 + BWI76_RS14550 0.57 +0.2 3,054,693 + BWI76_RS14550 0.71 -0.3 3,054,723 + BWI76_RS14550 0.73 -1.9 3,054,999 - -1.2 3,055,463 - +1.2 3,055,500 + BWI76_RS14555 0.11 +0.3 3,055,605 - BWI76_RS14555 0.16 -0.1 3,055,667 - BWI76_RS14555 0.19 -3.4 3,056,098 - BWI76_RS14555 0.40 +1.1
Or see this region's nucleotide sequence