Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11940 and BWI76_RS11945 are separated by 56 nucleotides BWI76_RS11945 and BWI76_RS11950 are separated by 161 nucleotides BWI76_RS11950 and BWI76_RS11955 are separated by 135 nucleotides BWI76_RS11955 and BWI76_RS11960 are separated by 6 nucleotides
BWI76_RS11940: BWI76_RS11940 - aconitate hydratase 1, at 2,513,339 to 2,516,011
_RS11940
BWI76_RS11945: BWI76_RS11945 - GTP cyclohydrolase II, at 2,516,068 to 2,516,658
_RS11945
BWI76_RS11950: BWI76_RS11950 - phosphatidylglycerophosphatase B, at 2,516,820 to 2,517,587
_RS11950
BWI76_RS11955: BWI76_RS11955 - hypothetical protein, at 2,517,723 to 2,518,031
_RS11955
BWI76_RS11960: BWI76_RS11960 - lipopolysaccharide assembly protein LapB, at 2,518,038 to 2,519,207
_RS11960
Position (kb)
2516
2517
2518 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2516.688 kb on - strand at 2516.753 kb on - strand at 2516.942 kb on + strand, within BWI76_RS11950 at 2516.947 kb on - strand, within BWI76_RS11950 at 2517.084 kb on + strand, within BWI76_RS11950 at 2517.098 kb on - strand, within BWI76_RS11950 at 2517.339 kb on + strand, within BWI76_RS11950 at 2517.340 kb on + strand, within BWI76_RS11950 at 2517.345 kb on + strand, within BWI76_RS11950 at 2517.523 kb on - strand at 2517.610 kb on - strand at 2517.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,516,688 - -2.3 2,516,753 - -0.5 2,516,942 + BWI76_RS11950 0.16 +0.7 2,516,947 - BWI76_RS11950 0.17 +0.8 2,517,084 + BWI76_RS11950 0.34 -0.2 2,517,098 - BWI76_RS11950 0.36 -3.8 2,517,339 + BWI76_RS11950 0.68 -0.4 2,517,340 + BWI76_RS11950 0.68 +2.9 2,517,345 + BWI76_RS11950 0.68 +0.2 2,517,523 - -2.0 2,517,610 - +1.5 2,517,649 - -3.1
Or see this region's nucleotide sequence