Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11700

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11695 and BWI76_RS11700 are separated by 208 nucleotidesBWI76_RS11700 and BWI76_RS11705 are separated by 4 nucleotides BWI76_RS11695: BWI76_RS11695 - ATP-independent periplasmic protein-refolding chaperone, at 2,461,237 to 2,461,719 _RS11695 BWI76_RS11700: BWI76_RS11700 - hypothetical protein, at 2,461,928 to 2,462,470 _RS11700 BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517 _RS11705 Position (kb) 2461 2462 2463Strain fitness (log2 ratio) -2 -1 0 1 2at 2461.161 kb on + strandat 2461.161 kb on - strandat 2461.182 kb on + strandat 2461.195 kb on + strandat 2461.195 kb on - strandat 2461.252 kb on + strandat 2461.257 kb on + strandat 2461.265 kb on + strandat 2461.270 kb on + strandat 2461.273 kb on - strandat 2461.281 kb on + strandat 2461.286 kb on + strand, within BWI76_RS11695at 2461.294 kb on - strand, within BWI76_RS11695at 2461.294 kb on - strand, within BWI76_RS11695at 2461.316 kb on + strand, within BWI76_RS11695at 2461.324 kb on - strand, within BWI76_RS11695at 2461.386 kb on + strand, within BWI76_RS11695at 2461.394 kb on - strand, within BWI76_RS11695at 2461.479 kb on - strand, within BWI76_RS11695at 2461.480 kb on - strand, within BWI76_RS11695at 2461.535 kb on - strand, within BWI76_RS11695at 2461.554 kb on + strand, within BWI76_RS11695at 2461.579 kb on + strand, within BWI76_RS11695at 2461.714 kb on + strandat 2461.714 kb on + strandat 2461.731 kb on + strandat 2461.777 kb on - strandat 2461.777 kb on - strandat 2461.777 kb on - strandat 2461.777 kb on - strandat 2461.857 kb on - strandat 2461.869 kb on - strandat 2462.037 kb on + strand, within BWI76_RS11700at 2462.426 kb on + strandat 2462.634 kb on + strandat 2462.979 kb on + strand, within BWI76_RS11705

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,461,161 + -0.6
2,461,161 - +1.8
2,461,182 + -0.2
2,461,195 + +1.1
2,461,195 - +2.0
2,461,252 + -0.6
2,461,257 + -1.4
2,461,265 + -0.0
2,461,270 + +1.6
2,461,273 - -1.5
2,461,281 + -1.1
2,461,286 + BWI76_RS11695 0.10 -1.8
2,461,294 - BWI76_RS11695 0.12 -1.0
2,461,294 - BWI76_RS11695 0.12 -0.1
2,461,316 + BWI76_RS11695 0.16 +0.9
2,461,324 - BWI76_RS11695 0.18 +0.1
2,461,386 + BWI76_RS11695 0.31 -0.9
2,461,394 - BWI76_RS11695 0.33 +2.1
2,461,479 - BWI76_RS11695 0.50 +0.8
2,461,480 - BWI76_RS11695 0.50 +1.0
2,461,535 - BWI76_RS11695 0.62 +0.5
2,461,554 + BWI76_RS11695 0.66 +0.7
2,461,579 + BWI76_RS11695 0.71 +0.4
2,461,714 + +0.7
2,461,714 + -0.6
2,461,731 + -2.7
2,461,777 - -1.1
2,461,777 - +1.5
2,461,777 - -1.7
2,461,777 - +0.4
2,461,857 - +0.3
2,461,869 - +0.1
2,462,037 + BWI76_RS11700 0.20 -0.8
2,462,426 + -1.5
2,462,634 + -0.4
2,462,979 + BWI76_RS11705 0.25 +0.6

Or see this region's nucleotide sequence