Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11055

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11050 and BWI76_RS11055 are separated by 12 nucleotidesBWI76_RS11055 and BWI76_RS11060 are separated by 190 nucleotidesBWI76_RS11060 and BWI76_RS11065 are separated by 141 nucleotides BWI76_RS11050: BWI76_RS11050 - 23S rRNA pseudouridine(955/2504/2580) synthase, at 2,332,413 to 2,333,408 _RS11050 BWI76_RS11055: BWI76_RS11055 - hydrolase, at 2,333,421 to 2,334,566 _RS11055 BWI76_RS11060: BWI76_RS11060 - septum formation inhibitor Maf, at 2,334,757 to 2,335,341 _RS11060 BWI76_RS11065: BWI76_RS11065 - hypothetical protein, at 2,335,483 to 2,336,004 _RS11065 Position (kb) 2333 2334 2335Strain fitness (log2 ratio) -3 -2 -1 0 1at 2332.541 kb on + strand, within BWI76_RS11050at 2332.547 kb on - strand, within BWI76_RS11050at 2332.547 kb on - strand, within BWI76_RS11050at 2332.549 kb on - strand, within BWI76_RS11050at 2332.549 kb on - strand, within BWI76_RS11050at 2332.585 kb on + strand, within BWI76_RS11050at 2332.699 kb on + strand, within BWI76_RS11050at 2332.806 kb on + strand, within BWI76_RS11050at 2332.813 kb on + strand, within BWI76_RS11050at 2332.821 kb on - strand, within BWI76_RS11050at 2332.989 kb on - strand, within BWI76_RS11050at 2333.186 kb on - strand, within BWI76_RS11050at 2333.211 kb on - strand, within BWI76_RS11050at 2333.570 kb on + strand, within BWI76_RS11055at 2333.838 kb on + strand, within BWI76_RS11055at 2334.197 kb on + strand, within BWI76_RS11055at 2334.286 kb on - strand, within BWI76_RS11055at 2334.373 kb on - strand, within BWI76_RS11055at 2334.548 kb on - strandat 2334.685 kb on + strandat 2334.914 kb on - strand, within BWI76_RS11060at 2335.003 kb on - strandat 2335.153 kb on + strand, within BWI76_RS11060

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,332,541 + BWI76_RS11050 0.13 -3.5
2,332,547 - BWI76_RS11050 0.13 -0.4
2,332,547 - BWI76_RS11050 0.13 +1.2
2,332,549 - BWI76_RS11050 0.14 -0.2
2,332,549 - BWI76_RS11050 0.14 -2.7
2,332,585 + BWI76_RS11050 0.17 -0.4
2,332,699 + BWI76_RS11050 0.29 -2.2
2,332,806 + BWI76_RS11050 0.39 -0.5
2,332,813 + BWI76_RS11050 0.40 -0.2
2,332,821 - BWI76_RS11050 0.41 -3.3
2,332,989 - BWI76_RS11050 0.58 -1.2
2,333,186 - BWI76_RS11050 0.78 -0.2
2,333,211 - BWI76_RS11050 0.80 -2.6
2,333,570 + BWI76_RS11055 0.13 +0.2
2,333,838 + BWI76_RS11055 0.36 +1.2
2,334,197 + BWI76_RS11055 0.68 -0.2
2,334,286 - BWI76_RS11055 0.75 +1.7
2,334,373 - BWI76_RS11055 0.83 -0.0
2,334,548 - +0.4
2,334,685 + -1.6
2,334,914 - BWI76_RS11060 0.27 +1.3
2,335,003 - -0.1
2,335,153 + BWI76_RS11060 0.68 -0.9

Or see this region's nucleotide sequence