Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10055 and BWI76_RS10060 are separated by 51 nucleotides BWI76_RS10060 and BWI76_RS10065 overlap by 4 nucleotides BWI76_RS10065 and BWI76_RS10070 are separated by 89 nucleotides BWI76_RS10070 and BWI76_RS10075 are separated by 267 nucleotides
BWI76_RS10055: BWI76_RS10055 - AraC family transcriptional regulator, at 2,130,286 to 2,131,074
_RS10055
BWI76_RS10060: BWI76_RS10060 - acylphosphatase, at 2,131,126 to 2,131,407
_RS10060
BWI76_RS10065: BWI76_RS10065 - sulfurtransferase TusE, at 2,131,404 to 2,131,733
_RS10065
BWI76_RS10070: BWI76_RS10070 - BAX inhibitor protein, at 2,131,823 to 2,132,482
_RS10070
BWI76_RS10075: BWI76_RS10075 - peptide ABC transporter substrate-binding protein, at 2,132,750 to 2,134,378
_RS10075
Position (kb)
2131
2132
2133 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2130.866 kb on + strand, within BWI76_RS10055 at 2131.088 kb on + strand at 2131.358 kb on + strand, within BWI76_RS10060 at 2132.155 kb on + strand, within BWI76_RS10070 at 2132.211 kb on - strand, within BWI76_RS10070 at 2132.355 kb on + strand, within BWI76_RS10070 at 2132.389 kb on + strand, within BWI76_RS10070 at 2132.551 kb on + strand at 2132.561 kb on + strand at 2132.561 kb on + strand at 2132.571 kb on + strand at 2132.707 kb on + strand at 2132.715 kb on - strand at 2132.715 kb on - strand at 2132.717 kb on + strand at 2132.717 kb on + strand at 2132.999 kb on - strand, within BWI76_RS10075 at 2133.201 kb on - strand, within BWI76_RS10075 at 2133.256 kb on - strand, within BWI76_RS10075 at 2133.258 kb on + strand, within BWI76_RS10075 at 2133.266 kb on - strand, within BWI76_RS10075
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,130,866 + BWI76_RS10055 0.74 -0.5 2,131,088 + +1.1 2,131,358 + BWI76_RS10060 0.82 -2.4 2,132,155 + BWI76_RS10070 0.50 +0.5 2,132,211 - BWI76_RS10070 0.59 +0.2 2,132,355 + BWI76_RS10070 0.81 +1.7 2,132,389 + BWI76_RS10070 0.86 +1.1 2,132,551 + -3.3 2,132,561 + -0.3 2,132,561 + +1.3 2,132,571 + -2.8 2,132,707 + +0.2 2,132,715 - -0.4 2,132,715 - -0.9 2,132,717 + +0.2 2,132,717 + +0.4 2,132,999 - BWI76_RS10075 0.15 +0.2 2,133,201 - BWI76_RS10075 0.28 +0.8 2,133,256 - BWI76_RS10075 0.31 -0.9 2,133,258 + BWI76_RS10075 0.31 +0.0 2,133,266 - BWI76_RS10075 0.32 -0.1
Or see this region's nucleotide sequence