Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07245

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07240 and BWI76_RS07245 are separated by 10 nucleotidesBWI76_RS07245 and BWI76_RS07250 are separated by 44 nucleotides BWI76_RS07240: BWI76_RS07240 - D-ribose transporter ATP-binding protein, at 1,523,449 to 1,524,933 _RS07240 BWI76_RS07245: BWI76_RS07245 - ABC transporter, at 1,524,944 to 1,525,975 _RS07245 BWI76_RS07250: BWI76_RS07250 - Zn-dependent hydrolase, at 1,526,020 to 1,527,261 _RS07250 Position (kb) 1524 1525 1526Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1523.954 kb on + strand, within BWI76_RS07240at 1523.954 kb on + strand, within BWI76_RS07240at 1523.978 kb on - strand, within BWI76_RS07240at 1524.110 kb on + strand, within BWI76_RS07240at 1524.110 kb on + strand, within BWI76_RS07240at 1524.110 kb on + strand, within BWI76_RS07240at 1524.110 kb on + strand, within BWI76_RS07240at 1524.118 kb on - strand, within BWI76_RS07240at 1524.118 kb on - strand, within BWI76_RS07240at 1524.118 kb on - strand, within BWI76_RS07240at 1524.118 kb on - strand, within BWI76_RS07240at 1524.203 kb on - strand, within BWI76_RS07240at 1524.209 kb on + strand, within BWI76_RS07240at 1524.209 kb on + strand, within BWI76_RS07240at 1524.216 kb on + strand, within BWI76_RS07240at 1524.217 kb on + strand, within BWI76_RS07240at 1524.309 kb on + strand, within BWI76_RS07240at 1524.376 kb on + strand, within BWI76_RS07240at 1524.376 kb on + strand, within BWI76_RS07240at 1524.452 kb on - strand, within BWI76_RS07240at 1524.563 kb on - strand, within BWI76_RS07240at 1524.565 kb on + strand, within BWI76_RS07240at 1524.573 kb on - strand, within BWI76_RS07240at 1524.573 kb on - strand, within BWI76_RS07240at 1524.573 kb on - strand, within BWI76_RS07240at 1524.588 kb on - strand, within BWI76_RS07240at 1524.588 kb on - strand, within BWI76_RS07240at 1524.588 kb on - strand, within BWI76_RS07240at 1524.609 kb on - strand, within BWI76_RS07240at 1524.644 kb on - strand, within BWI76_RS07240at 1524.725 kb on + strand, within BWI76_RS07240at 1524.782 kb on - strand, within BWI76_RS07240at 1524.814 kb on - strandat 1524.843 kb on + strandat 1524.843 kb on + strandat 1524.851 kb on - strandat 1524.932 kb on + strandat 1524.942 kb on - strandat 1524.949 kb on - strandat 1525.018 kb on + strandat 1525.065 kb on + strand, within BWI76_RS07245at 1525.173 kb on + strand, within BWI76_RS07245at 1525.175 kb on - strand, within BWI76_RS07245at 1525.181 kb on - strand, within BWI76_RS07245at 1525.186 kb on - strand, within BWI76_RS07245at 1525.208 kb on - strand, within BWI76_RS07245at 1525.212 kb on + strand, within BWI76_RS07245at 1525.212 kb on + strand, within BWI76_RS07245at 1525.212 kb on + strand, within BWI76_RS07245at 1525.231 kb on - strand, within BWI76_RS07245at 1525.262 kb on - strand, within BWI76_RS07245at 1525.273 kb on - strand, within BWI76_RS07245at 1525.427 kb on - strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.450 kb on + strand, within BWI76_RS07245at 1525.458 kb on - strand, within BWI76_RS07245at 1525.458 kb on - strand, within BWI76_RS07245at 1525.458 kb on - strandat 1525.458 kb on - strand, within BWI76_RS07245at 1525.458 kb on - strand, within BWI76_RS07245at 1525.458 kb on - strand, within BWI76_RS07245at 1525.458 kb on - strand, within BWI76_RS07245at 1525.499 kb on - strand, within BWI76_RS07245at 1525.552 kb on + strand, within BWI76_RS07245at 1525.552 kb on + strand, within BWI76_RS07245at 1525.735 kb on + strand, within BWI76_RS07245at 1525.866 kb on - strand, within BWI76_RS07245at 1526.001 kb on + strandat 1526.616 kb on + strand, within BWI76_RS07250

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,523,954 + BWI76_RS07240 0.34 -3.3
1,523,954 + BWI76_RS07240 0.34 +0.5
1,523,978 - BWI76_RS07240 0.36 +1.4
1,524,110 + BWI76_RS07240 0.45 -1.0
1,524,110 + BWI76_RS07240 0.45 -0.1
1,524,110 + BWI76_RS07240 0.45 +0.1
1,524,110 + BWI76_RS07240 0.45 -2.8
1,524,118 - BWI76_RS07240 0.45 +1.1
1,524,118 - BWI76_RS07240 0.45 +0.1
1,524,118 - BWI76_RS07240 0.45 -0.6
1,524,118 - BWI76_RS07240 0.45 -0.2
1,524,203 - BWI76_RS07240 0.51 -1.6
1,524,209 + BWI76_RS07240 0.51 -0.2
1,524,209 + BWI76_RS07240 0.51 -0.6
1,524,216 + BWI76_RS07240 0.52 -2.4
1,524,217 + BWI76_RS07240 0.52 -1.2
1,524,309 + BWI76_RS07240 0.58 -0.2
1,524,376 + BWI76_RS07240 0.62 +2.7
1,524,376 + BWI76_RS07240 0.62 -3.6
1,524,452 - BWI76_RS07240 0.68 -0.4
1,524,563 - BWI76_RS07240 0.75 +0.7
1,524,565 + BWI76_RS07240 0.75 -0.3
1,524,573 - BWI76_RS07240 0.76 +0.8
1,524,573 - BWI76_RS07240 0.76 -2.5
1,524,573 - BWI76_RS07240 0.76 +0.0
1,524,588 - BWI76_RS07240 0.77 +1.1
1,524,588 - BWI76_RS07240 0.77 +0.6
1,524,588 - BWI76_RS07240 0.77 -0.5
1,524,609 - BWI76_RS07240 0.78 -0.2
1,524,644 - BWI76_RS07240 0.80 -3.0
1,524,725 + BWI76_RS07240 0.86 -1.0
1,524,782 - BWI76_RS07240 0.90 -1.6
1,524,814 - -0.7
1,524,843 + -4.6
1,524,843 + -0.9
1,524,851 - +0.7
1,524,932 + -0.2
1,524,942 - -0.1
1,524,949 - +0.7
1,525,018 + +1.2
1,525,065 + BWI76_RS07245 0.12 -1.1
1,525,173 + BWI76_RS07245 0.22 +0.4
1,525,175 - BWI76_RS07245 0.22 +0.8
1,525,181 - BWI76_RS07245 0.23 +0.8
1,525,186 - BWI76_RS07245 0.23 +1.9
1,525,208 - BWI76_RS07245 0.26 +2.2
1,525,212 + BWI76_RS07245 0.26 +0.5
1,525,212 + BWI76_RS07245 0.26 -1.9
1,525,212 + BWI76_RS07245 0.26 -2.7
1,525,231 - BWI76_RS07245 0.28 +0.3
1,525,262 - BWI76_RS07245 0.31 +1.9
1,525,273 - BWI76_RS07245 0.32 -2.7
1,525,427 - BWI76_RS07245 0.47 +1.5
1,525,450 + BWI76_RS07245 0.49 +0.4
1,525,450 + BWI76_RS07245 0.49 -0.2
1,525,450 + BWI76_RS07245 0.49 +1.2
1,525,450 + BWI76_RS07245 0.49 -1.8
1,525,450 + BWI76_RS07245 0.49 -2.1
1,525,450 + BWI76_RS07245 0.49 +2.4
1,525,450 + BWI76_RS07245 0.49 -2.0
1,525,450 + BWI76_RS07245 0.49 -0.8
1,525,450 + BWI76_RS07245 0.49 +1.4
1,525,450 + BWI76_RS07245 0.49 +0.4
1,525,458 - BWI76_RS07245 0.50 -0.6
1,525,458 - BWI76_RS07245 0.50 +0.3
1,525,458 - +0.4
1,525,458 - BWI76_RS07245 0.50 -0.7
1,525,458 - BWI76_RS07245 0.50 -0.1
1,525,458 - BWI76_RS07245 0.50 -1.0
1,525,458 - BWI76_RS07245 0.50 +0.6
1,525,499 - BWI76_RS07245 0.54 +0.4
1,525,552 + BWI76_RS07245 0.59 +1.2
1,525,552 + BWI76_RS07245 0.59 +1.4
1,525,735 + BWI76_RS07245 0.77 -0.7
1,525,866 - BWI76_RS07245 0.89 -1.3
1,526,001 + +0.1
1,526,616 + BWI76_RS07250 0.48 -0.6

Or see this region's nucleotide sequence