Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04015

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04005 and BWI76_RS04010 are separated by 108 nucleotidesBWI76_RS04010 and BWI76_RS04015 overlap by 10 nucleotidesBWI76_RS04015 and BWI76_RS04020 are separated by 284 nucleotides BWI76_RS04005: BWI76_RS04005 - primosomal protein DnaI, at 829,219 to 829,758 _RS04005 BWI76_RS04010: BWI76_RS04010 - hypothetical protein, at 829,867 to 830,340 _RS04010 BWI76_RS04015: BWI76_RS04015 - membrane protein, at 830,331 to 831,107 _RS04015 BWI76_RS04020: BWI76_RS04020 - 4-hydroxybenzoate 3-monooxygenase, at 831,392 to 832,576 _RS04020 Position (kb) 830 831 832Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 829.789 kb on - strandat 829.807 kb on - strandat 829.888 kb on - strandat 829.991 kb on - strand, within BWI76_RS04010at 830.052 kb on + strand, within BWI76_RS04010at 830.106 kb on - strand, within BWI76_RS04010at 830.152 kb on - strand, within BWI76_RS04010at 830.228 kb on + strand, within BWI76_RS04010at 830.236 kb on - strand, within BWI76_RS04010at 830.297 kb on + strandat 830.297 kb on + strandat 830.305 kb on - strandat 830.305 kb on - strandat 830.383 kb on - strandat 830.566 kb on - strand, within BWI76_RS04015at 830.566 kb on - strand, within BWI76_RS04015at 830.625 kb on + strand, within BWI76_RS04015at 830.763 kb on + strand, within BWI76_RS04015at 830.778 kb on - strand, within BWI76_RS04015at 830.926 kb on - strand, within BWI76_RS04015at 830.934 kb on - strand, within BWI76_RS04015at 830.950 kb on - strand, within BWI76_RS04015at 830.973 kb on - strand, within BWI76_RS04015at 831.008 kb on + strand, within BWI76_RS04015at 831.063 kb on - strandat 831.117 kb on - strandat 831.197 kb on - strandat 831.382 kb on + strandat 831.474 kb on + strandat 831.488 kb on - strandat 831.509 kb on - strandat 831.509 kb on - strandat 831.546 kb on + strand, within BWI76_RS04020at 831.625 kb on + strand, within BWI76_RS04020at 831.659 kb on + strand, within BWI76_RS04020at 831.996 kb on - strand, within BWI76_RS04020at 832.095 kb on - strand, within BWI76_RS04020

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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829,789 - -0.1
829,807 - +1.0
829,888 - -1.3
829,991 - BWI76_RS04010 0.26 -0.3
830,052 + BWI76_RS04010 0.39 -2.2
830,106 - BWI76_RS04010 0.50 -2.4
830,152 - BWI76_RS04010 0.60 +0.0
830,228 + BWI76_RS04010 0.76 -0.3
830,236 - BWI76_RS04010 0.78 +1.3
830,297 + +0.4
830,297 + -0.8
830,305 - -0.3
830,305 - +1.7
830,383 - -0.9
830,566 - BWI76_RS04015 0.30 +0.4
830,566 - BWI76_RS04015 0.30 -4.2
830,625 + BWI76_RS04015 0.38 +1.5
830,763 + BWI76_RS04015 0.56 +1.2
830,778 - BWI76_RS04015 0.58 +1.4
830,926 - BWI76_RS04015 0.77 +1.8
830,934 - BWI76_RS04015 0.78 +2.9
830,950 - BWI76_RS04015 0.80 +0.3
830,973 - BWI76_RS04015 0.83 +0.3
831,008 + BWI76_RS04015 0.87 -1.8
831,063 - +0.4
831,117 - +1.2
831,197 - -2.9
831,382 + +0.6
831,474 + -0.3
831,488 - +0.9
831,509 - -1.9
831,509 - -0.6
831,546 + BWI76_RS04020 0.13 +0.0
831,625 + BWI76_RS04020 0.20 +0.2
831,659 + BWI76_RS04020 0.23 +0.6
831,996 - BWI76_RS04020 0.51 -1.6
832,095 - BWI76_RS04020 0.59 -2.0

Or see this region's nucleotide sequence