Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2930 and DvMF_2931 are separated by 330 nucleotides DvMF_2931 and DvMF_2932 are separated by 724 nucleotides
DvMF_2930: DvMF_2930 - transcriptional regulator, GntR family (RefSeq), at 3,701,469 to 3,702,350
_2930
DvMF_2931: DvMF_2931 - elongation factor G (RefSeq), at 3,702,681 to 3,704,747
_2931
DvMF_2932: DvMF_2932 - hypothetical protein (RefSeq), at 3,705,472 to 3,705,984
_2932
Position (kb)
3702
3703
3704
3705 Strain fitness (log2 ratio)
-1
0
1 at 3702.089 kb on + strand, within DvMF_2930 at 3702.161 kb on - strand, within DvMF_2930 at 3702.263 kb on - strand at 3702.661 kb on - strand at 3702.824 kb on - strand at 3702.987 kb on + strand, within DvMF_2931 at 3703.293 kb on + strand, within DvMF_2931 at 3703.425 kb on - strand, within DvMF_2931 at 3703.506 kb on - strand, within DvMF_2931 at 3703.506 kb on - strand, within DvMF_2931 at 3703.707 kb on + strand, within DvMF_2931 at 3703.918 kb on + strand, within DvMF_2931 at 3703.960 kb on - strand, within DvMF_2931 at 3704.179 kb on + strand, within DvMF_2931 at 3704.311 kb on - strand, within DvMF_2931 at 3704.379 kb on + strand, within DvMF_2931 at 3704.542 kb on - strand at 3704.564 kb on + strand at 3704.611 kb on + strand at 3704.809 kb on + strand at 3704.965 kb on + strand at 3704.965 kb on + strand at 3704.965 kb on + strand at 3704.973 kb on - strand at 3705.167 kb on - strand at 3705.178 kb on - strand at 3705.326 kb on - strand at 3705.365 kb on - strand at 3705.375 kb on + strand at 3705.393 kb on + strand at 3705.463 kb on + strand at 3705.531 kb on - strand, within DvMF_2932 at 3705.533 kb on + strand, within DvMF_2932 at 3705.657 kb on + strand, within DvMF_2932 at 3705.716 kb on + strand, within DvMF_2932
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 3,702,089 + DvMF_2930 0.70 +0.3 3,702,161 - DvMF_2930 0.78 +0.1 3,702,263 - +0.5 3,702,661 - +0.8 3,702,824 - -0.8 3,702,987 + DvMF_2931 0.15 -0.6 3,703,293 + DvMF_2931 0.30 -0.1 3,703,425 - DvMF_2931 0.36 -0.4 3,703,506 - DvMF_2931 0.40 -1.0 3,703,506 - DvMF_2931 0.40 -0.4 3,703,707 + DvMF_2931 0.50 -0.5 3,703,918 + DvMF_2931 0.60 +0.3 3,703,960 - DvMF_2931 0.62 -1.0 3,704,179 + DvMF_2931 0.72 -0.6 3,704,311 - DvMF_2931 0.79 -0.1 3,704,379 + DvMF_2931 0.82 -1.0 3,704,542 - -0.1 3,704,564 + -0.7 3,704,611 + -0.3 3,704,809 + +0.3 3,704,965 + +0.0 3,704,965 + -0.6 3,704,965 + -0.0 3,704,973 - +0.2 3,705,167 - +0.5 3,705,178 - +0.3 3,705,326 - +0.8 3,705,365 - +0.7 3,705,375 + +0.3 3,705,393 + +0.7 3,705,463 + +0.3 3,705,531 - DvMF_2932 0.12 +0.2 3,705,533 + DvMF_2932 0.12 -0.2 3,705,657 + DvMF_2932 0.36 +0.6 3,705,716 + DvMF_2932 0.48 +0.8
Or see this region's nucleotide sequence