Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2356 and DvMF_2357 are separated by 13 nucleotides DvMF_2357 and DvMF_2358 are separated by 274 nucleotides
DvMF_2356: DvMF_2356 - transcriptional regulator, XRE family (RefSeq), at 2,975,651 to 2,976,217
_2356
DvMF_2357: DvMF_2357 - AMP-binding domain protein (RefSeq), at 2,976,231 to 2,977,883
_2357
DvMF_2358: DvMF_2358 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein (RefSeq), at 2,978,158 to 2,979,636
_2358
Position (kb)
2976
2977
2978 Strain fitness (log2 ratio)
-1
0
1
2 at 2975.330 kb on + strand at 2975.338 kb on - strand at 2975.338 kb on - strand at 2975.338 kb on - strand at 2975.467 kb on - strand at 2975.503 kb on + strand at 2975.720 kb on + strand, within DvMF_2356 at 2975.819 kb on - strand, within DvMF_2356 at 2975.831 kb on - strand, within DvMF_2356 at 2975.838 kb on - strand, within DvMF_2356 at 2975.970 kb on - strand, within DvMF_2356 at 2976.006 kb on + strand, within DvMF_2356 at 2976.212 kb on + strand at 2976.340 kb on + strand at 2976.385 kb on - strand at 2976.608 kb on - strand, within DvMF_2357 at 2977.046 kb on + strand, within DvMF_2357 at 2977.080 kb on + strand, within DvMF_2357 at 2977.308 kb on - strand, within DvMF_2357 at 2977.337 kb on + strand, within DvMF_2357 at 2977.418 kb on + strand, within DvMF_2357 at 2977.766 kb on - strand at 2978.134 kb on + strand at 2978.556 kb on - strand, within DvMF_2358 at 2978.583 kb on - strand, within DvMF_2358 at 2978.757 kb on - strand, within DvMF_2358 at 2978.791 kb on + strand, within DvMF_2358 at 2978.791 kb on + strand, within DvMF_2358 at 2978.879 kb on - strand, within DvMF_2358
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 2,975,330 + +0.6 2,975,338 - +0.3 2,975,338 - +0.3 2,975,338 - +0.2 2,975,467 - +2.1 2,975,503 + -0.5 2,975,720 + DvMF_2356 0.12 +0.2 2,975,819 - DvMF_2356 0.30 +0.3 2,975,831 - DvMF_2356 0.32 -0.0 2,975,838 - DvMF_2356 0.33 +0.3 2,975,970 - DvMF_2356 0.56 +0.5 2,976,006 + DvMF_2356 0.63 -0.1 2,976,212 + +0.7 2,976,340 + -1.0 2,976,385 - -0.5 2,976,608 - DvMF_2357 0.23 -1.2 2,977,046 + DvMF_2357 0.49 -0.0 2,977,080 + DvMF_2357 0.51 -0.2 2,977,308 - DvMF_2357 0.65 -0.8 2,977,337 + DvMF_2357 0.67 -0.6 2,977,418 + DvMF_2357 0.72 +0.1 2,977,766 - +0.4 2,978,134 + +0.3 2,978,556 - DvMF_2358 0.27 +1.2 2,978,583 - DvMF_2358 0.29 +0.5 2,978,757 - DvMF_2358 0.41 +0.7 2,978,791 + DvMF_2358 0.43 +0.5 2,978,791 + DvMF_2358 0.43 -0.1 2,978,879 - DvMF_2358 0.49 +0.5
Or see this region's nucleotide sequence