Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1191 and DvMF_1192 are separated by 204 nucleotides DvMF_1192 and DvMF_1193 are separated by 42 nucleotides DvMF_1193 and DvMF_1194 are separated by 272 nucleotides DvMF_1194 and DvMF_1195 are separated by 100 nucleotides
DvMF_1191: DvMF_1191 - hypothetical protein (RefSeq), at 1,469,733 to 1,470,872
_1191
DvMF_1192: DvMF_1192 - hypothetical protein (RefSeq), at 1,471,077 to 1,471,262
_1192
DvMF_1193: DvMF_1193 - protein of unknown function DUF6 transmembrane (RefSeq), at 1,471,305 to 1,472,309
_1193
DvMF_1194: DvMF_1194 - GrpE protein (RefSeq), at 1,472,582 to 1,473,187
_1194
DvMF_1195: DvMF_1195 - heat-inducible transcription repressor HrcA (RefSeq), at 1,473,288 to 1,474,355
_1195
Position (kb)
1471
1472
1473 Strain fitness (log2 ratio)
-1
0
1 at 1470.521 kb on + strand, within DvMF_1191 at 1470.572 kb on - strand, within DvMF_1191 at 1470.613 kb on - strand, within DvMF_1191 at 1470.734 kb on + strand, within DvMF_1191 at 1470.742 kb on - strand, within DvMF_1191 at 1471.219 kb on + strand, within DvMF_1192 at 1471.452 kb on + strand, within DvMF_1193 at 1471.561 kb on + strand, within DvMF_1193 at 1471.564 kb on - strand, within DvMF_1193 at 1471.766 kb on + strand, within DvMF_1193 at 1471.777 kb on + strand, within DvMF_1193 at 1471.777 kb on + strand, within DvMF_1193 at 1471.790 kb on - strand, within DvMF_1193 at 1471.855 kb on + strand, within DvMF_1193 at 1471.911 kb on - strand, within DvMF_1193 at 1473.157 kb on - strand at 1473.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 1,470,521 + DvMF_1191 0.69 +0.6 1,470,572 - DvMF_1191 0.74 -1.1 1,470,613 - DvMF_1191 0.77 +0.5 1,470,734 + DvMF_1191 0.88 +1.0 1,470,742 - DvMF_1191 0.89 +1.1 1,471,219 + DvMF_1192 0.76 +0.1 1,471,452 + DvMF_1193 0.15 +0.5 1,471,561 + DvMF_1193 0.25 +0.3 1,471,564 - DvMF_1193 0.26 -0.7 1,471,766 + DvMF_1193 0.46 -0.5 1,471,777 + DvMF_1193 0.47 +0.1 1,471,777 + DvMF_1193 0.47 +0.5 1,471,790 - DvMF_1193 0.48 +0.2 1,471,855 + DvMF_1193 0.55 -0.1 1,471,911 - DvMF_1193 0.60 +0.7 1,473,157 - -1.1 1,473,197 - +0.5
Or see this region's nucleotide sequence