Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0868 and DvMF_0869 are separated by 128 nucleotides DvMF_0869 and DvMF_0870 are separated by 108 nucleotides DvMF_0870 and DvMF_0871 are separated by 160 nucleotides
DvMF_0868: DvMF_0868 - hypothetical protein (RefSeq), at 1,046,375 to 1,046,848
_0868
DvMF_0869: DvMF_0869 - hypothetical protein (RefSeq), at 1,046,977 to 1,047,213
_0869
DvMF_0870: DvMF_0870 - RNA binding S1 domain protein (RefSeq), at 1,047,322 to 1,049,592
_0870
DvMF_0871: DvMF_0871 - hypothetical protein (RefSeq), at 1,049,753 to 1,052,377
_0871
Position (kb)
1047
1048
1049
1050 Strain fitness (log2 ratio)
-1
0
1
2 at 1046.791 kb on + strand, within DvMF_0868 at 1047.024 kb on - strand, within DvMF_0869 at 1047.168 kb on - strand, within DvMF_0869 at 1047.216 kb on - strand at 1047.246 kb on - strand at 1047.423 kb on - strand at 1047.679 kb on + strand, within DvMF_0870 at 1047.712 kb on + strand, within DvMF_0870 at 1047.772 kb on - strand, within DvMF_0870 at 1047.777 kb on + strand, within DvMF_0870 at 1047.815 kb on + strand, within DvMF_0870 at 1047.869 kb on + strand, within DvMF_0870 at 1048.120 kb on + strand, within DvMF_0870 at 1048.183 kb on - strand, within DvMF_0870 at 1048.444 kb on - strand, within DvMF_0870 at 1048.512 kb on - strand, within DvMF_0870 at 1048.529 kb on + strand, within DvMF_0870 at 1048.537 kb on - strand, within DvMF_0870 at 1048.839 kb on + strand, within DvMF_0870 at 1048.873 kb on + strand, within DvMF_0870 at 1048.916 kb on - strand, within DvMF_0870 at 1048.968 kb on - strand, within DvMF_0870 at 1049.137 kb on - strand, within DvMF_0870 at 1049.240 kb on + strand, within DvMF_0870 at 1049.240 kb on + strand, within DvMF_0870 at 1049.248 kb on - strand, within DvMF_0870 at 1049.515 kb on + strand at 1049.829 kb on - strand at 1049.845 kb on + strand at 1049.954 kb on - strand at 1049.954 kb on - strand at 1050.310 kb on - strand, within DvMF_0871
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 1,046,791 + DvMF_0868 0.88 +1.8 1,047,024 - DvMF_0869 0.20 +0.4 1,047,168 - DvMF_0869 0.81 +0.4 1,047,216 - -0.1 1,047,246 - +1.0 1,047,423 - -0.4 1,047,679 + DvMF_0870 0.16 +0.5 1,047,712 + DvMF_0870 0.17 +0.6 1,047,772 - DvMF_0870 0.20 +0.5 1,047,777 + DvMF_0870 0.20 +0.4 1,047,815 + DvMF_0870 0.22 +1.0 1,047,869 + DvMF_0870 0.24 +0.2 1,048,120 + DvMF_0870 0.35 +0.5 1,048,183 - DvMF_0870 0.38 +0.3 1,048,444 - DvMF_0870 0.49 +0.6 1,048,512 - DvMF_0870 0.52 +2.4 1,048,529 + DvMF_0870 0.53 +0.5 1,048,537 - DvMF_0870 0.54 +1.1 1,048,839 + DvMF_0870 0.67 +0.2 1,048,873 + DvMF_0870 0.68 +0.1 1,048,916 - DvMF_0870 0.70 +0.3 1,048,968 - DvMF_0870 0.72 +0.5 1,049,137 - DvMF_0870 0.80 +0.8 1,049,240 + DvMF_0870 0.84 +0.6 1,049,240 + DvMF_0870 0.84 +0.5 1,049,248 - DvMF_0870 0.85 +1.1 1,049,515 + +0.2 1,049,829 - +0.7 1,049,845 + +0.9 1,049,954 - +0.3 1,049,954 - +0.6 1,050,310 - DvMF_0871 0.21 +0.5
Or see this region's nucleotide sequence