Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0456 and DvMF_0457 are separated by 31 nucleotides DvMF_0457 and DvMF_0458 overlap by 4 nucleotides DvMF_0458 and DvMF_0459 are separated by 1 nucleotides DvMF_0459 and DvMF_0460 are separated by 477 nucleotides
DvMF_0456: DvMF_0456 - hypothetical protein (RefSeq), at 535,850 to 535,969
_0456
DvMF_0457: DvMF_0457 - leucyl/phenylalanyl-tRNA/protein transferase (RefSeq), at 536,001 to 536,834
_0457
DvMF_0458: DvMF_0458 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 536,831 to 539,281
_0458
DvMF_0459: DvMF_0459 - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 539,283 to 539,585
_0459
DvMF_0460: DvMF_0460 - adenylate cyclase (RefSeq), at 540,063 to 540,740
_0460
Position (kb) 536
537
538
539
540 Strain fitness (log2 ratio) -1
0
1
2 at 535.844 kb on - strand at 536.171 kb on - strand, within DvMF_0457 at 536.271 kb on - strand, within DvMF_0457 at 536.551 kb on - strand, within DvMF_0457 at 536.797 kb on - strand at 537.530 kb on - strand, within DvMF_0458 at 537.535 kb on - strand, within DvMF_0458 at 537.599 kb on + strand, within DvMF_0458 at 537.605 kb on - strand, within DvMF_0458 at 537.626 kb on - strand, within DvMF_0458 at 537.758 kb on + strand, within DvMF_0458 at 537.776 kb on - strand, within DvMF_0458 at 537.790 kb on - strand, within DvMF_0458 at 537.915 kb on - strand, within DvMF_0458 at 538.116 kb on + strand, within DvMF_0458 at 538.511 kb on - strand, within DvMF_0458 at 538.511 kb on - strand, within DvMF_0458 at 538.990 kb on - strand, within DvMF_0458 at 539.037 kb on + strand at 539.042 kb on + strand at 539.281 kb on + strand at 539.281 kb on + strand at 539.291 kb on + strand at 539.366 kb on + strand, within DvMF_0459 at 539.379 kb on - strand, within DvMF_0459 at 539.885 kb on + strand at 539.900 kb on - strand at 539.920 kb on + strand at 540.080 kb on + strand at 540.234 kb on + strand, within DvMF_0460
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 535,844 - +0.0 536,171 - DvMF_0457 0.20 +1.2 536,271 - DvMF_0457 0.32 +0.2 536,551 - DvMF_0457 0.66 +0.0 536,797 - +0.3 537,530 - DvMF_0458 0.29 +0.5 537,535 - DvMF_0458 0.29 +1.2 537,599 + DvMF_0458 0.31 +0.5 537,605 - DvMF_0458 0.32 -0.3 537,626 - DvMF_0458 0.32 +0.7 537,758 + DvMF_0458 0.38 +1.2 537,776 - DvMF_0458 0.39 +0.9 537,790 - DvMF_0458 0.39 +0.4 537,915 - DvMF_0458 0.44 +0.6 538,116 + DvMF_0458 0.52 +0.9 538,511 - DvMF_0458 0.69 +1.9 538,511 - DvMF_0458 0.69 +0.7 538,990 - DvMF_0458 0.88 +1.3 539,037 + +0.1 539,042 + +0.3 539,281 + +0.8 539,281 + +1.5 539,291 + +0.6 539,366 + DvMF_0459 0.27 +0.0 539,379 - DvMF_0459 0.32 +0.1 539,885 + +0.8 539,900 - +0.3 539,920 + +0.8 540,080 + +0.6 540,234 + DvMF_0460 0.25 +0.7
Or see this region's nucleotide sequence