Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0380 and DvMF_0381 are separated by 466 nucleotides DvMF_0381 and DvMF_0382 are separated by 391 nucleotides
DvMF_0380: DvMF_0380 - hypothetical protein (RefSeq), at 447,301 to 447,816
_0380
DvMF_0381: DvMF_0381 - L-lactate transport (RefSeq), at 448,283 to 449,803
_0381
DvMF_0382: DvMF_0382 - phosphate uptake regulator, PhoU (RefSeq), at 450,195 to 450,878
_0382
Position (kb) 448
449
450 Strain fitness (log2 ratio) -2
-1
0
1 at 447.305 kb on - strand at 447.359 kb on + strand, within DvMF_0380 at 447.432 kb on + strand, within DvMF_0380 at 447.440 kb on - strand, within DvMF_0380 at 447.440 kb on - strand, within DvMF_0380 at 447.440 kb on - strand, within DvMF_0380 at 447.440 kb on - strand, within DvMF_0380 at 447.440 kb on - strand, within DvMF_0380 at 448.041 kb on - strand at 448.073 kb on + strand at 448.099 kb on - strand at 448.129 kb on - strand at 448.287 kb on + strand at 448.674 kb on + strand, within DvMF_0381 at 448.676 kb on - strand, within DvMF_0381 at 448.886 kb on + strand, within DvMF_0381 at 449.000 kb on - strand, within DvMF_0381 at 449.106 kb on + strand, within DvMF_0381 at 449.342 kb on - strand, within DvMF_0381 at 449.551 kb on + strand, within DvMF_0381 at 449.682 kb on + strand at 449.739 kb on - strand at 450.264 kb on + strand, within DvMF_0382 at 450.373 kb on + strand, within DvMF_0382 at 450.381 kb on - strand, within DvMF_0382 at 450.388 kb on - strand, within DvMF_0382 at 450.389 kb on + strand, within DvMF_0382 at 450.516 kb on - strand, within DvMF_0382 at 450.624 kb on + strand, within DvMF_0382 at 450.644 kb on - strand, within DvMF_0382
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 447,305 - +1.0 447,359 + DvMF_0380 0.11 +1.1 447,432 + DvMF_0380 0.25 +1.6 447,440 - DvMF_0380 0.27 +0.9 447,440 - DvMF_0380 0.27 +1.5 447,440 - DvMF_0380 0.27 +1.0 447,440 - DvMF_0380 0.27 +0.9 447,440 - DvMF_0380 0.27 +1.5 448,041 - +0.7 448,073 + +0.8 448,099 - +0.8 448,129 - +0.4 448,287 + -1.3 448,674 + DvMF_0381 0.26 +0.3 448,676 - DvMF_0381 0.26 -2.4 448,886 + DvMF_0381 0.40 -0.5 449,000 - DvMF_0381 0.47 +0.0 449,106 + DvMF_0381 0.54 -1.0 449,342 - DvMF_0381 0.70 -0.7 449,551 + DvMF_0381 0.83 +1.3 449,682 + -0.4 449,739 - -1.0 450,264 + DvMF_0382 0.10 +0.7 450,373 + DvMF_0382 0.26 +1.5 450,381 - DvMF_0382 0.27 +0.5 450,388 - DvMF_0382 0.28 +0.6 450,389 + DvMF_0382 0.28 +0.2 450,516 - DvMF_0382 0.47 +0.0 450,624 + DvMF_0382 0.63 +1.0 450,644 - DvMF_0382 0.66 +0.6
Or see this region's nucleotide sequence