Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0367 and DvMF_0368 are separated by 112 nucleotides DvMF_0368 and DvMF_0369 are separated by 734 nucleotides
DvMF_0367: DvMF_0367 - ABC transporter related (RefSeq), at 431,158 to 433,014
_0367
DvMF_0368: DvMF_0368 - hypothetical protein (RefSeq), at 433,127 to 433,771
_0368
DvMF_0369: DvMF_0369 - pseudouridine synthase (RefSeq), at 434,506 to 435,261
_0369
Position (kb) 433
434 Strain fitness (log2 ratio) -1
0
1
2 at 433.164 kb on + strand at 433.183 kb on - strand at 433.230 kb on - strand, within DvMF_0368 at 433.282 kb on + strand, within DvMF_0368 at 433.282 kb on + strand, within DvMF_0368 at 433.284 kb on + strand, within DvMF_0368 at 433.290 kb on - strand, within DvMF_0368 at 433.290 kb on - strand, within DvMF_0368 at 433.418 kb on - strand, within DvMF_0368 at 433.473 kb on + strand, within DvMF_0368 at 433.539 kb on + strand, within DvMF_0368 at 433.607 kb on - strand, within DvMF_0368 at 433.612 kb on - strand, within DvMF_0368 at 433.646 kb on - strand, within DvMF_0368 at 433.673 kb on - strand, within DvMF_0368 at 433.711 kb on - strand at 433.853 kb on + strand at 433.907 kb on + strand at 434.045 kb on + strand at 434.076 kb on + strand at 434.102 kb on - strand at 434.104 kb on - strand at 434.371 kb on - strand at 434.589 kb on + strand, within DvMF_0369 at 434.590 kb on - strand, within DvMF_0369 at 434.635 kb on - strand, within DvMF_0369 at 434.635 kb on - strand, within DvMF_0369 at 434.642 kb on + strand, within DvMF_0369
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 433,164 + +0.4 433,183 - +0.0 433,230 - DvMF_0368 0.16 +0.3 433,282 + DvMF_0368 0.24 +0.2 433,282 + DvMF_0368 0.24 +0.0 433,284 + DvMF_0368 0.24 -0.3 433,290 - DvMF_0368 0.25 +0.7 433,290 - DvMF_0368 0.25 +0.1 433,418 - DvMF_0368 0.45 +0.3 433,473 + DvMF_0368 0.54 +0.2 433,539 + DvMF_0368 0.64 -0.1 433,607 - DvMF_0368 0.74 +0.8 433,612 - DvMF_0368 0.75 -0.3 433,646 - DvMF_0368 0.80 +0.1 433,673 - DvMF_0368 0.85 -0.1 433,711 - +0.2 433,853 + +0.8 433,907 + +1.1 434,045 + +0.4 434,076 + +1.2 434,102 - -0.2 434,104 - -0.1 434,371 - +1.9 434,589 + DvMF_0369 0.11 +0.1 434,590 - DvMF_0369 0.11 -0.1 434,635 - DvMF_0369 0.17 -0.4 434,635 - DvMF_0369 0.17 +0.3 434,642 + DvMF_0369 0.18 +0.0
Or see this region's nucleotide sequence