Experiment: 5 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0047 and DvMF_0048 are separated by 162 nucleotides DvMF_0048 and DvMF_0049 are separated by 264 nucleotides
DvMF_0047: DvMF_0047 - argininosuccinate synthase (RefSeq), at 62,630 to 63,835
_0047
DvMF_0048: DvMF_0048 - argininosuccinate lyase (RefSeq), at 63,998 to 65,380
_0048
DvMF_0049: DvMF_0049 - hypothetical protein (RefSeq), at 65,645 to 66,274
_0049
Position (kb) 63
64
65
66 Strain fitness (log2 ratio) -1
0
1 at 63.126 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.157 kb on - strand, within DvMF_0047 at 63.162 kb on - strand, within DvMF_0047 at 63.172 kb on - strand, within DvMF_0047 at 63.455 kb on + strand, within DvMF_0047 at 63.468 kb on - strand, within DvMF_0047 at 63.664 kb on + strand, within DvMF_0047 at 63.672 kb on - strand, within DvMF_0047 at 63.672 kb on - strand, within DvMF_0047 at 63.708 kb on - strand, within DvMF_0047 at 64.097 kb on + strand at 64.102 kb on + strand at 64.646 kb on + strand, within DvMF_0048 at 64.852 kb on + strand, within DvMF_0048 at 64.972 kb on + strand, within DvMF_0048 at 65.213 kb on + strand, within DvMF_0048 at 65.331 kb on + strand at 65.507 kb on - strand at 65.667 kb on + strand at 65.700 kb on - strand at 65.818 kb on + strand, within DvMF_0049 at 65.904 kb on + strand, within DvMF_0049 at 66.116 kb on + strand, within DvMF_0049 at 66.136 kb on + strand, within DvMF_0049 at 66.136 kb on + strand, within DvMF_0049 at 66.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 30C remove 63,126 + DvMF_0047 0.41 -0.5 63,144 + DvMF_0047 0.43 -0.9 63,144 + DvMF_0047 0.43 -0.1 63,154 + DvMF_0047 0.43 -0.4 63,154 + DvMF_0047 0.43 +1.0 63,154 + DvMF_0047 0.43 -1.4 63,157 - DvMF_0047 0.44 -0.8 63,162 - DvMF_0047 0.44 -0.9 63,172 - DvMF_0047 0.45 -1.0 63,455 + DvMF_0047 0.68 -0.8 63,468 - DvMF_0047 0.69 +0.7 63,664 + DvMF_0047 0.86 +1.6 63,672 - DvMF_0047 0.86 -0.2 63,672 - DvMF_0047 0.86 -0.5 63,708 - DvMF_0047 0.89 -0.0 64,097 + -0.0 64,102 + +1.1 64,646 + DvMF_0048 0.47 -0.1 64,852 + DvMF_0048 0.62 -0.4 64,972 + DvMF_0048 0.70 -0.8 65,213 + DvMF_0048 0.88 -0.5 65,331 + +0.4 65,507 - -0.2 65,667 + +0.3 65,700 - +0.7 65,818 + DvMF_0049 0.27 -0.3 65,904 + DvMF_0049 0.41 +0.8 66,116 + DvMF_0049 0.75 +0.3 66,136 + DvMF_0049 0.78 +0.6 66,136 + DvMF_0049 0.78 +0.0 66,271 - +0.9
Or see this region's nucleotide sequence