Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3467 and Dsui_3468 are separated by 94 nucleotides Dsui_3468 and Dsui_3469 overlap by 4 nucleotides Dsui_3469 and Dsui_3470 are separated by 195 nucleotides
Dsui_3467: Dsui_3467 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 3,730,179 to 3,731,525
_3467
Dsui_3468: Dsui_3468 - Response regulator receiver domain protein,histidine kinase, at 3,731,620 to 3,732,789
_3468
Dsui_3469: Dsui_3469 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,732,786 to 3,733,415
_3469
Dsui_3470: Dsui_3470 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,733,611 to 3,734,009
_3470
Position (kb)
3731
3732
3733 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3730.680 kb on - strand at 3730.691 kb on + strand at 3730.783 kb on + strand, within Dsui_3467 at 3730.887 kb on - strand, within Dsui_3467 at 3730.948 kb on - strand at 3731.037 kb on - strand at 3731.084 kb on + strand, within Dsui_3467 at 3731.110 kb on - strand, within Dsui_3467 at 3731.115 kb on - strand, within Dsui_3467 at 3731.728 kb on + strand at 3731.736 kb on - strand at 3731.844 kb on + strand, within Dsui_3468 at 3731.852 kb on - strand at 3731.881 kb on + strand, within Dsui_3468 at 3731.961 kb on + strand, within Dsui_3468 at 3732.001 kb on - strand at 3732.307 kb on + strand, within Dsui_3468 at 3732.315 kb on - strand, within Dsui_3468 at 3732.409 kb on + strand, within Dsui_3468 at 3732.513 kb on + strand, within Dsui_3468 at 3732.545 kb on - strand at 3732.550 kb on - strand, within Dsui_3468 at 3732.570 kb on + strand, within Dsui_3468 at 3732.627 kb on + strand, within Dsui_3468 at 3732.643 kb on - strand at 3732.659 kb on - strand at 3732.665 kb on + strand, within Dsui_3468 at 3732.900 kb on + strand, within Dsui_3469 at 3732.970 kb on + strand, within Dsui_3469 at 3733.063 kb on - strand, within Dsui_3469 at 3733.324 kb on - strand, within Dsui_3469 at 3733.386 kb on + strand at 3733.394 kb on - strand at 3733.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,730,680 - -1.1 3,730,691 + +0.5 3,730,783 + Dsui_3467 0.45 -1.5 3,730,887 - Dsui_3467 0.53 -1.1 3,730,948 - +0.5 3,731,037 - +0.5 3,731,084 + Dsui_3467 0.67 +0.5 3,731,110 - Dsui_3467 0.69 -2.3 3,731,115 - Dsui_3467 0.69 +0.5 3,731,728 + -0.3 3,731,736 - -0.5 3,731,844 + Dsui_3468 0.19 -0.8 3,731,852 - +0.5 3,731,881 + Dsui_3468 0.22 -0.4 3,731,961 + Dsui_3468 0.29 -0.1 3,732,001 - +0.5 3,732,307 + Dsui_3468 0.59 -0.5 3,732,315 - Dsui_3468 0.59 -0.5 3,732,409 + Dsui_3468 0.67 -1.5 3,732,513 + Dsui_3468 0.76 -1.8 3,732,545 - -1.1 3,732,550 - Dsui_3468 0.79 -0.5 3,732,570 + Dsui_3468 0.81 -2.1 3,732,627 + Dsui_3468 0.86 -2.8 3,732,643 - +0.5 3,732,659 - +0.5 3,732,665 + Dsui_3468 0.89 -0.8 3,732,900 + Dsui_3469 0.18 -3.3 3,732,970 + Dsui_3469 0.29 -0.5 3,733,063 - Dsui_3469 0.44 -1.1 3,733,324 - Dsui_3469 0.85 -1.5 3,733,386 + +0.5 3,733,394 - +0.5 3,733,542 - +0.5
Or see this region's nucleotide sequence