Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3369 and Dsui_3370 are separated by 49 nucleotides Dsui_3370 and Dsui_3371 are separated by 207 nucleotides Dsui_3371 and Dsui_3372 are separated by 154 nucleotides
Dsui_3369: Dsui_3369 - acyl-CoA dehydrogenase, at 3,610,182 to 3,611,366
_3369
Dsui_3370: Dsui_3370 - hypothetical protein, at 3,611,416 to 3,611,847
_3370
Dsui_3371: Dsui_3371 - putative oxidoreductase, aryl-alcohol dehydrogenase like protein, at 3,612,055 to 3,613,107
_3371
Dsui_3372: Dsui_3372 - hypothetical protein, at 3,613,262 to 3,615,406
_3372
Position (kb)
3612
3613
3614 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3611.132 kb on + strand, within Dsui_3369 at 3611.207 kb on - strand at 3611.266 kb on + strand at 3611.317 kb on + strand at 3611.317 kb on + strand at 3611.340 kb on - strand at 3611.342 kb on - strand at 3611.372 kb on + strand at 3611.373 kb on + strand at 3611.463 kb on - strand, within Dsui_3370 at 3611.485 kb on - strand at 3611.489 kb on - strand, within Dsui_3370 at 3611.536 kb on + strand, within Dsui_3370 at 3611.556 kb on - strand, within Dsui_3370 at 3611.616 kb on + strand, within Dsui_3370 at 3611.629 kb on + strand, within Dsui_3370 at 3611.637 kb on - strand, within Dsui_3370 at 3611.648 kb on + strand, within Dsui_3370 at 3611.677 kb on + strand, within Dsui_3370 at 3611.700 kb on + strand, within Dsui_3370 at 3611.753 kb on - strand, within Dsui_3370 at 3611.781 kb on - strand, within Dsui_3370 at 3611.849 kb on - strand at 3611.985 kb on - strand at 3612.071 kb on + strand at 3612.082 kb on + strand at 3612.133 kb on - strand at 3612.221 kb on - strand, within Dsui_3371 at 3612.483 kb on + strand, within Dsui_3371 at 3612.491 kb on - strand, within Dsui_3371 at 3612.498 kb on + strand at 3612.498 kb on + strand, within Dsui_3371 at 3612.506 kb on - strand, within Dsui_3371 at 3612.557 kb on + strand, within Dsui_3371 at 3612.570 kb on + strand at 3612.623 kb on - strand, within Dsui_3371 at 3612.624 kb on + strand, within Dsui_3371 at 3612.652 kb on - strand, within Dsui_3371 at 3612.710 kb on + strand at 3612.718 kb on - strand, within Dsui_3371 at 3612.729 kb on + strand at 3612.955 kb on - strand, within Dsui_3371 at 3613.043 kb on - strand at 3613.101 kb on + strand at 3613.109 kb on - strand at 3613.121 kb on - strand at 3613.124 kb on - strand at 3613.156 kb on + strand at 3613.156 kb on + strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.218 kb on + strand at 3613.269 kb on + strand at 3613.398 kb on - strand at 3613.436 kb on - strand at 3613.438 kb on + strand at 3613.470 kb on + strand at 3613.526 kb on + strand, within Dsui_3372 at 3613.627 kb on - strand, within Dsui_3372 at 3613.638 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3614.105 kb on + strand, within Dsui_3372
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,611,132 + Dsui_3369 0.80 -0.3 3,611,207 - -0.5 3,611,266 + -0.5 3,611,317 + -0.8 3,611,317 + -0.5 3,611,340 - -1.1 3,611,342 - -2.7 3,611,372 + -1.2 3,611,373 + -1.1 3,611,463 - Dsui_3370 0.11 -1.1 3,611,485 - +0.5 3,611,489 - Dsui_3370 0.17 -0.5 3,611,536 + Dsui_3370 0.28 +1.0 3,611,556 - Dsui_3370 0.32 +0.5 3,611,616 + Dsui_3370 0.46 +1.0 3,611,629 + Dsui_3370 0.49 +0.3 3,611,637 - Dsui_3370 0.51 -0.5 3,611,648 + Dsui_3370 0.54 -0.0 3,611,677 + Dsui_3370 0.60 +0.0 3,611,700 + Dsui_3370 0.66 -0.3 3,611,753 - Dsui_3370 0.78 -0.5 3,611,781 - Dsui_3370 0.84 -0.5 3,611,849 - -2.3 3,611,985 - -0.5 3,612,071 + -0.5 3,612,082 + +0.5 3,612,133 - -0.4 3,612,221 - Dsui_3371 0.16 -2.3 3,612,483 + Dsui_3371 0.41 +0.5 3,612,491 - Dsui_3371 0.41 -1.8 3,612,498 + +0.5 3,612,498 + Dsui_3371 0.42 -2.3 3,612,506 - Dsui_3371 0.43 -2.8 3,612,557 + Dsui_3371 0.48 -0.5 3,612,570 + +0.5 3,612,623 - Dsui_3371 0.54 -1.1 3,612,624 + Dsui_3371 0.54 -1.1 3,612,652 - Dsui_3371 0.57 -0.5 3,612,710 + -0.5 3,612,718 - Dsui_3371 0.63 +0.5 3,612,729 + +0.5 3,612,955 - Dsui_3371 0.85 -1.1 3,613,043 - +0.5 3,613,101 + -0.5 3,613,109 - -2.1 3,613,121 - +0.5 3,613,124 - -0.5 3,613,156 + -1.1 3,613,156 + +0.5 3,613,164 - +0.5 3,613,164 - -1.1 3,613,164 - +0.5 3,613,164 - -0.5 3,613,164 - +0.5 3,613,218 + +0.4 3,613,269 + -0.6 3,613,398 - -1.5 3,613,436 - +0.5 3,613,438 + -0.1 3,613,470 + -0.3 3,613,526 + Dsui_3372 0.12 -0.2 3,613,627 - Dsui_3372 0.17 -0.5 3,613,638 - Dsui_3372 0.18 +0.5 3,613,669 - Dsui_3372 0.19 +0.5 3,613,669 - Dsui_3372 0.19 -0.5 3,614,105 + Dsui_3372 0.39 +0.8
Or see this region's nucleotide sequence