Strain Fitness in Dechlorosoma suillum PS around Dsui_2882

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2881 and Dsui_2882 are separated by 10 nucleotidesDsui_2882 and Dsui_2883 overlap by 1 nucleotidesDsui_2883 and Dsui_2884 are separated by 166 nucleotides Dsui_2881: Dsui_2881 - 8-amino-7-oxononanoate synthase, at 3,077,077 to 3,078,252 _2881 Dsui_2882: Dsui_2882 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 3,078,263 to 3,079,015 _2882 Dsui_2883: Dsui_2883 - biotin biosynthesis protein BioC, at 3,079,015 to 3,079,788 _2883 Dsui_2884: Dsui_2884 - dethiobiotin synthase, at 3,079,955 to 3,080,608 _2884 Position (kb) 3078 3079 3080Strain fitness (log2 ratio) -3 -2 -1 0 1at 3077.724 kb on - strand, within Dsui_2881at 3077.838 kb on - strand, within Dsui_2881at 3077.869 kb on - strand, within Dsui_2881at 3077.915 kb on + strand, within Dsui_2881at 3078.077 kb on + strand, within Dsui_2881at 3078.085 kb on - strandat 3078.159 kb on - strandat 3078.199 kb on - strandat 3078.228 kb on - strandat 3078.285 kb on + strandat 3078.293 kb on - strandat 3078.298 kb on - strandat 3078.408 kb on + strand, within Dsui_2882at 3078.505 kb on + strand, within Dsui_2882at 3078.513 kb on - strand, within Dsui_2882at 3078.524 kb on + strand, within Dsui_2882at 3078.586 kb on - strandat 3078.878 kb on - strand, within Dsui_2882at 3078.879 kb on - strandat 3078.983 kb on + strandat 3079.040 kb on + strandat 3079.069 kb on - strandat 3079.100 kb on - strand, within Dsui_2883at 3079.224 kb on + strandat 3079.341 kb on + strand, within Dsui_2883at 3079.354 kb on - strandat 3079.375 kb on - strand, within Dsui_2883at 3079.439 kb on + strand, within Dsui_2883at 3079.548 kb on - strandat 3079.601 kb on + strand, within Dsui_2883at 3079.754 kb on - strandat 3079.770 kb on + strandat 3079.778 kb on - strandat 3079.928 kb on - strandat 3079.953 kb on + strandat 3079.961 kb on - strandat 3079.963 kb on + strandat 3080.005 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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3,077,724 - Dsui_2881 0.55 -2.9
3,077,838 - Dsui_2881 0.65 +0.6
3,077,869 - Dsui_2881 0.67 -0.9
3,077,915 + Dsui_2881 0.71 -2.4
3,078,077 + Dsui_2881 0.85 -1.8
3,078,085 - +0.6
3,078,159 - -1.4
3,078,199 - -0.9
3,078,228 - -0.4
3,078,285 + -1.8
3,078,293 - +0.6
3,078,298 - +0.6
3,078,408 + Dsui_2882 0.19 -1.8
3,078,505 + Dsui_2882 0.32 -1.7
3,078,513 - Dsui_2882 0.33 -0.4
3,078,524 + Dsui_2882 0.35 -1.5
3,078,586 - +0.6
3,078,878 - Dsui_2882 0.82 -0.4
3,078,879 - +0.6
3,078,983 + -1.6
3,079,040 + -2.3
3,079,069 - -0.9
3,079,100 - Dsui_2883 0.11 +0.6
3,079,224 + -0.4
3,079,341 + Dsui_2883 0.42 -2.2
3,079,354 - -0.4
3,079,375 - Dsui_2883 0.47 +0.6
3,079,439 + Dsui_2883 0.55 -1.6
3,079,548 - +0.6
3,079,601 + Dsui_2883 0.76 -2.4
3,079,754 - -0.9
3,079,770 + +0.0
3,079,778 - +0.6
3,079,928 - +0.6
3,079,953 + -0.2
3,079,961 - +0.6
3,079,963 + +0.0
3,080,005 - +0.6

Or see this region's nucleotide sequence